MGE detailed information
MGE type: Conjugative plasmid MGE length: 169226 bp
Accession: NZ_CP017473 Location: 1..169226 Organism: Enterobacter cloacae strain M12X01451 Replicon: plasmid pM12X01451
Accession: NZ_CP017473 Location: 1..169226 Organism: Enterobacter cloacae strain M12X01451 Replicon: plasmid pM12X01451
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GRI03_RS00005 () | 13..4482 | + | 4470 | WP_187143866.1 | hypothetical protein | - |
| GRI03_RS00010 () | 4692..4861 | + | 170 | Protein_1 | helix-turn-helix domain-containing protein | - |
| GRI03_RS00020 () | 6140..6462 | + | 323 | Protein_3 | IS481 family transposase ISErsp1 | Transposase |
| GRI03_RS00025 () | 6776..7726 | - | 951 | WP_095907054.1 | Adhesin YadA | VF |
| GRI03_RS00030 () | 8211..9439 | + | 1229 | Protein_5 | DUF3440 domain-containing protein | - |
| GRI03_RS00035 () | 9439..10065 | + | 627 | WP_095907055.1 | ParB/RepB/Spo0J family partition protein | - |
| GRI03_RS00040 () | 10233..10970 | - | 738 | WP_095907056.1 | YadA-like family protein | - |
| GRI03_RS00045 () | 11107..11295 | + | 189 | Protein_8 | ImmA/IrrE family metallo-endopeptidase | - |
| GRI03_RS00050 () | 11756..12745 | + | 990 | WP_095907058.1 | tyrosine-type recombinase/integrase | - |
| GRI03_RS00055 () | 13018..13593 | + | 576 | WP_095907059.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| GRI03_RS00060 () | 13620..14559 | + | 940 | Protein_11 | DEAD/DEAH box helicase | - |
| GRI03_RS00065 () | 14562..15044 | + | 483 | Protein_12 | ISL3 family transposase ISKox3 | Transposase |
| GRI03_RS00070 () | 15074..17194 | + | 2121 | Protein_13 | Tn3 family transposase TnpA_ISNpu13 | Transposase |
| GRI03_RS00075 () | 17253..17408 | - | 156 | Protein_14 | DNA methylase | - |
| GRI03_RS00080 () | 17443..18297 | - | 855 | WP_095907060.1 | IS3 family transposase ISEc14 | Transposase |
| GRI03_RS00085 () | 18294..18578 | - | 285 | WP_095907061.1 | IS3 family transposase ISEam1 | Transposase |
| GRI03_RS00090 () | 18637..19236 | + | 600 | WP_095907163.1 | ParA family plasmid-partitioning AAA ATPase | - |
| GRI03_RS24170 () | 19226..19528 | + | 303 | WP_187143867.1 | hypothetical protein | - |
| GRI03_RS00100 () | 19564..19767 | + | 204 | WP_095907062.1 | hypothetical protein | - |
| GRI03_RS00105 () | 19930..24702 | - | 4773 | WP_095907063.1 | AIDA repeat-containing protein | - |
| GRI03_RS00110 () | 24686..25915 | - | 1230 | WP_095907064.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| GRI03_RS00115 () | 26656..27152 | - | 497 | Protein_22 | tyrosine-type recombinase/integrase | - |
| GRI03_RS00120 () | 27128..27348 | - | 221 | Protein_23 | cytoplasmic protein | - |
| GRI03_RS00125 () | 27350..27655 | - | 306 | WP_095907065.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| GRI03_RS00130 () | 27657..27875 | - | 219 | WP_095907066.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| GRI03_RS00135 () | 28462..28696 | + | 235 | Protein_26 | hypothetical protein | - |
| GRI03_RS00140 () | 28719..29612 | + | 894 | WP_187143874.1 | hypothetical protein | - |
| GRI03_RS24175 () | 29678..29890 | + | 213 | WP_187143868.1 | hypothetical protein | - |
| GRI03_RS00145 () | 30137..31066 | + | 930 | WP_095907164.1 | Recombination-promoting nuclease RpnA | VF |
| GRI03_RS00150 () | 31148..31729 | - | 582 | WP_095907069.1 | DUF2913 family protein | - |
| GRI03_RS00155 () | 31798..32061 | - | 264 | Protein_31 | NIPSNAP family protein | - |
| GRI03_RS00160 () | 32085..32318 | - | 234 | WP_187143869.1 | DUF2767 family protein | - |
| GRI03_RS00165 () | 32348..32941 | + | 594 | Protein_33 | Recombination-promoting nuclease RpnA | VF |
| GRI03_RS24180 () | 33456..33575 | + | 120 | WP_187143870.1 | colicin V family bacteriocin | - |
| GRI03_RS00180 () | 34135..34248 | - | 114 | WP_095907071.1 | colicin release lysis protein | - |
| GRI03_RS00185 () | 34329..34637 | + | 309 | WP_157735640.1 | colicin immunity protein Cui | - |
| GRI03_RS00190 () | 34663..34860 | + | 198 | WP_157735641.1 | colicin immunity protein Cui | - |
| GRI03_RS00195 () | 34907..35624 | - | 718 | Protein_38 | colicin immunity protein | - |
| GRI03_RS00200 () | 35652..36080 | + | 429 | WP_095907074.1 | Exc2 family lipoprotein | - |
| GRI03_RS24185 () | 36115..36348 | + | 234 | WP_187143875.1 | hypothetical protein | - |
| GRI03_RS00205 () | 36649..37692 | + | 1044 | WP_095907075.1 | extracellular solute-binding protein | - |
| GRI03_RS00210 () | 37722..37952 | + | 231 | Protein_42 | iron ABC transporter permease | - |
| GRI03_RS00215 () | 38095..38340 | - | 246 | WP_147720008.1 | hypothetical protein | - |
| GRI03_RS00220 () | 39308..41674 | - | 2367 | WP_095907076.1 | putative TonB-dependent receptor | VF |
| GRI03_RS00225 () | 41693..43735 | - | 2043 | WP_095907077.1 | putative TonB-dependent receptor | VF |
| GRI03_RS00230 () | 43914..44119 | + | 206 | Protein_46 | IS6 family transposase | - |
| GRI03_RS00235 () | 44268..44552 | + | 285 | WP_095907061.1 | IS3 family transposase ISEam1 | Transposase |
| GRI03_RS00240 () | 44549..45403 | + | 855 | WP_095907060.1 | IS3 family transposase ISEc14 | Transposase |
| GRI03_RS00245 () | 45921..46898 | - | 978 | WP_095907078.1 | Virulence regulon transcriptional activator VirF | VF |
| GRI03_RS00250 () | 47099..47740 | + | 642 | WP_095907079.1 | type 1 fimbrial protein | - |
| GRI03_RS00255 () | 47816..48538 | + | 723 | WP_095907080.1 | Chaperone protein FocC | VF |
| GRI03_RS00260 () | 48554..51049 | + | 2496 | WP_095907081.1 | putative outer membrane usher protein ElfC | VF |
| GRI03_RS00265 () | 51046..51981 | + | 936 | WP_095907082.1 | fimbrial protein | - |
| GRI03_RS00270 () | 52344..52661 | - | 318 | WP_095907083.1 | hypothetical protein | - |
| GRI03_RS00275 () | 52696..52887 | - | 192 | Protein_55 | DNA polymerase III subunit theta | - |
| GRI03_RS00280 () | 53166..53794 | - | 629 | Protein_56 | DNA methylase | - |
| GRI03_RS00285 () | 54254..55762 | + | 1509 | WP_095907084.1 | putative cyclic di-GMP phosphodiesterase PdeG | VF |
| GRI03_RS00290 () | 55996..57796 | + | 1801 | Protein_58 | peptidase domain-containing ABC transporter | - |
| GRI03_RS00295 () | 58024..58218 | - | 195 | WP_147720010.1 | hypothetical protein | - |
| GRI03_RS00300 () | 58347..58985 | - | 639 | WP_095907085.1 | hypothetical protein | - |
| GRI03_RS00305 () | 58973..59308 | - | 336 | WP_095907086.1 | hypothetical protein | - |
| GRI03_RS00315 () | 59741..60889 | - | 1149 | Protein_62 | IS3 family transposase | - |
| GRI03_RS00320 () | 61136..61390 | + | 255 | WP_095907087.1 | hypothetical protein | - |
| GRI03_RS00325 () | 61526..61870 | + | 345 | WP_095907088.1 | hypothetical protein | - |
| GRI03_RS00330 () | 61877..62167 | - | 291 | Protein_65 | nucleoside triphosphatase NudI | - |
| GRI03_RS00335 () | 62168..62308 | + | 141 | Protein_66 | VapC toxin family PIN domain ribonuclease | - |
| GRI03_RS00340 () | 62515..63522 | + | 1008 | WP_095907089.1 | AraC family transcriptional regulator | - |
| GRI03_RS00345 () | 63534..64208 | + | 675 | WP_095907090.1 | NAD(P)H-binding protein | - |
| GRI03_RS24190 () | 64389..65192 | + | 804 | Protein_69 | hypothetical protein | - |
| GRI03_RS00355 () | 65693..66167 | + | 475 | Protein_70 | IS110 family transposase ISEc21 | Transposase |
| GRI03_RS00360 () | 66233..67015 | - | 783 | Protein_71 | IS21 family transposase ISSen8 | Transposase |
| GRI03_RS00365 () | 67012..68034 | - | 1023 | WP_095907091.1 | IS21 family transposase ISSen8 | Transposase |
| GRI03_RS00370 () | 68196..68381 | - | 186 | Protein_73 | hypothetical protein | - |
| GRI03_RS00375 () | 68811..69575 | - | 765 | WP_095907092.1 | GntR family transcriptional regulator | - |
| GRI03_RS00380 () | 69773..71041 | - | 1269 | WP_095907093.1 | MFS transporter | - |
| GRI03_RS00385 () | 71822..72219 | - | 398 | Protein_76 | ATP-binding protein | - |
| GRI03_RS00390 () | 72216..73706 | - | 1491 | WP_095907094.1 | IS21 family transposase ISEc10 | Transposase |
| GRI03_RS00395 () | 73800..73964 | + | 165 | Protein_78 | Tn3 family transposase | - |
| GRI03_RS00400 () | 73997..74365 | + | 369 | Protein_79 | Tn3 family transposase ISEc63 | Transposase |
| GRI03_RS00405 () | 74389..79764 | - | 5376 | WP_095907095.1 | AIDA repeat-containing protein | - |
| GRI03_RS00410 () | 79748..80977 | - | 1230 | WP_095907064.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| GRI03_RS00415 () | 81733..82365 | + | 633 | WP_095907096.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GRI03_RS00420 () | 82419..82619 | + | 201 | WP_000840805.1 | hypothetical protein | - |
| GRI03_RS00425 () | 82765..83718 | + | 954 | WP_095907166.1 | Recombination-promoting nuclease RpnA | VF |
| GRI03_RS00430 () | 83989..84758 | - | 770 | Protein_85 | IS91 family transposase ISEc37 | Transposase |
| GRI03_RS00435 () | 84762..85108 | - | 347 | Protein_86 | transposase | - |
| GRI03_RS00445 () | 86010..86180 | + | 171 | WP_157735645.1 | colicin immunity protein Cui | - |
| GRI03_RS00450 () | 86232..87107 | + | 876 | WP_095907098.1 | Recombination-promoting nuclease RpnA | VF |
| GRI03_RS00455 () | 87186..87767 | - | 582 | WP_095907099.1 | DUF2913 family protein | - |
| GRI03_RS00460 () | 87836..88159 | - | 324 | Protein_90 | NIPSNAP family protein | - |
| GRI03_RS00465 () | 88183..88416 | - | 234 | WP_187143869.1 | DUF2767 family protein | - |
| GRI03_RS00470 () | 88897..89690 | - | 794 | Protein_92 | incFII family plasmid replication initiator RepA | - |
| GRI03_RS00475 () | 89671..89748 | - | 78 | WP_095907167.1 | RepA leader peptide Tap | - |
| GRI03_RS00480 () | 89964..90158 | - | 195 | WP_095907100.1 | hypothetical protein | - |
| GRI03_RS00485 () | 90387..91118 | - | 732 | WP_095907101.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| GRI03_RS00490 () | 91118..96415 | - | 5298 | WP_095907102.1 | Multifunctional conjugation protein TraI | Relaxase |
| GRI03_RS00495 () | 96415..98664 | - | 2250 | WP_095907103.1 | type IV conjugative transfer system coupling protein TraD | - |
| GRI03_RS00500 () | 98808..99545 | - | 738 | WP_095907168.1 | complement resistance protein TraT | - |
| GRI03_RS00505 () | 99689..99949 | - | 261 | WP_095907169.1 | protein TraS | - |
| GRI03_RS00510 () | 100275..103157 | - | 2883 | WP_095907104.1 | conjugal transfer mating pair stabilization protein TraG | - |
| GRI03_RS00515 () | 103162..104523 | - | 1362 | WP_095907105.1 | F-type conjugal transfer protein TraH | - |
| GRI03_RS00520 () | 104529..105131 | - | 603 | WP_095907106.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| GRI03_RS00525 () | 105155..105934 | - | 780 | WP_095907107.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| GRI03_RS00530 () | 105931..107760 | - | 1830 | WP_095907108.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| GRI03_RS00535 () | 107757..108371 | - | 615 | WP_095907170.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| GRI03_RS00540 () | 108388..109374 | - | 987 | WP_095907109.1 | conjugal transfer pilus assembly protein TraU | - |
| GRI03_RS00545 () | 109371..110006 | - | 636 | WP_095907110.1 | type-F conjugative transfer system protein TraW | - |
| GRI03_RS00550 () | 110003..110440 | - | 438 | WP_095907111.1 | type-F conjugative transfer system protein TrbI | - |
| GRI03_RS00555 () | 110437..113028 | - | 2592 | WP_095907112.1 | type IV secretion system protein TraC | - |
| GRI03_RS00560 () | 113039..113638 | - | 600 | WP_095907113.1 | type IV conjugative transfer system lipoprotein TraV | - |
| GRI03_RS00565 () | 113656..113850 | - | 195 | WP_095907114.1 | hypothetical protein | - |
| GRI03_RS00570 () | 113851..114075 | - | 225 | WP_095907115.1 | TraR/DksA C4-type zinc finger protein | - |
| GRI03_RS00575 () | 114186..115550 | - | 1365 | WP_095907116.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| GRI03_RS00580 () | 115537..116277 | - | 741 | WP_095907117.1 | type-F conjugative transfer system secretin TraK | - |
| GRI03_RS00585 () | 116267..116830 | - | 564 | WP_095907118.1 | type IV conjugative transfer system protein TraE | - |
| GRI03_RS00590 () | 116850..117155 | - | 306 | WP_095907119.1 | type IV conjugative transfer system protein TraL | - |
| GRI03_RS00595 () | 117157..117516 | - | 360 | WP_095907120.1 | type IV conjugative transfer system pilin TraA | - |
| GRI03_RS00600 () | 118033..118308 | - | 276 | WP_095907122.1 | conjugal transfer protein TraJ | - |
| GRI03_RS00605 () | 118907..119293 | - | 387 | WP_095907123.1 | relaxosome protein TraM | - |
| GRI03_RS00610 () | 119764..120219 | + | 456 | WP_095907124.1 | hypothetical protein | VF |
| GRI03_RS00615 () | 120231..120770 | - | 540 | WP_095907171.1 | antirestriction protein | - |
| GRI03_RS00620 () | 121309..122139 | - | 831 | WP_095907125.1 | type I restriction-modification system subunit M | - |
| GRI03_RS00625 () | 122185..122451 | - | 267 | WP_095907126.1 | hypothetical protein | - |
| GRI03_RS00630 () | 122537..122881 | - | 345 | WP_095907127.1 | hypothetical protein | - |
| GRI03_RS00635 () | 122932..123300 | - | 369 | WP_095907128.1 | hypothetical protein | - |
| GRI03_RS00640 () | 123517..124494 | + | 978 | WP_095907172.1 | IS110 family transposase ISSm3 | Transposase |
| GRI03_RS00645 () | 124591..124842 | + | 252 | WP_095907129.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | Antitoxin Detail |
| GRI03_RS00650 () | 124839..125093 | + | 255 | WP_095907130.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| GRI03_RS24195 () | 125567..125725 | - | 159 | WP_187143871.1 | hypothetical protein | - |
| GRI03_RS00660 () | 126017..126517 | - | 501 | WP_095907131.1 | antirestriction protein ArdA | - |
| GRI03_RS00665 () | 126560..126985 | - | 426 | WP_095907132.1 | antirestriction protein | - |
| GRI03_RS00670 () | 127247..127552 | + | 306 | WP_095907133.1 | Isochorismate pyruvate lyase | VF |
| GRI03_RS00675 () | 128016..128246 | - | 231 | WP_095907134.1 | hypothetical protein | - |
| GRI03_RS00680 () | 128286..128904 | - | 619 | Protein_134 | Mediator of plasmid stability | - |
| GRI03_RS00685 () | 128907..129227 | - | 321 | Protein_135 | StbA family protein | - |
| GRI03_RS00690 () | 129341..130144 | + | 804 | Protein_136 | translesion error-prone DNA polymerase V subunit UmuC | - |
| GRI03_RS00695 () | 130226..131200 | - | 975 | WP_187143872.1 | ParB/RepB/Spo0J family partition protein | - |
| GRI03_RS00700 () | 131200..132405 | - | 1206 | WP_095907136.1 | AAA family ATPase | - |
| GRI03_RS00705 () | 132812..133704 | + | 893 | Protein_139 | Recombination-promoting nuclease RpnA | VF |
| GRI03_RS00710 () | 134527..135516 | + | 990 | WP_147720012.1 | RepB family plasmid replication initiator protein | - |
| GRI03_RS00715 () | 135814..136209 | - | 396 | WP_095907138.1 | site-specific integrase | - |
| GRI03_RS00720 () | 136206..136892 | - | 687 | Protein_142 | phage integrase family protein | - |
| GRI03_RS00725 () | 137044..137550 | - | 507 | WP_095907139.1 | hypothetical protein | - |
| GRI03_RS00730 () | 137610..137894 | + | 285 | WP_095907061.1 | IS3 family transposase ISEam1 | Transposase |
| GRI03_RS00735 () | 137891..138745 | + | 855 | WP_095907060.1 | IS3 family transposase ISEc14 | Transposase |
| GRI03_RS00740 () | 138759..139274 | - | 516 | WP_095907140.1 | IS110 family transposase ISGme8 | Transposase |
| GRI03_RS00745 () | 139740..139940 | + | 201 | WP_187143873.1 | hypothetical protein | - |
| GRI03_RS00750 () | 139975..140205 | - | 231 | WP_017694173.1 | partitioning protein | - |
| GRI03_RS00755 () | 140258..140878 | - | 621 | WP_095907142.1 | ParA family protein | - |
| GRI03_RS00760 () | 141090..141596 | + | 507 | Protein_150 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GRI03_RS00765 () | 141872..142799 | + | 928 | Protein_151 | Recombination-promoting nuclease RpnA | VF |
| GRI03_RS00770 () | 142880..143383 | - | 504 | WP_095907143.1 | DUF2913 family protein | - |
| GRI03_RS24200 () | 143900..144134 | + | 235 | Protein_153 | resolvase | - |
| GRI03_RS00775 () | 144197..145372 | - | 1176 | WP_147720014.1 | putative protein YncE | VF |
| GRI03_RS00780 () | 145441..147702 | - | 2262 | WP_095907145.1 | TonB-dependent receptor | - |
| GRI03_RS00785 () | 147819..148619 | - | 801 | WP_095907146.1 | energy transducer TonB | - |
| GRI03_RS00790 () | 148627..149505 | - | 879 | WP_095907147.1 | ChaN family lipoprotein | - |
| GRI03_RS00795 () | 150022..150492 | - | 471 | WP_095907148.1 | hypothetical protein | - |
| GRI03_RS00800 () | 150576..151148 | - | 573 | WP_095907149.1 | FAD-dependent oxidoreductase | - |
| GRI03_RS00805 () | 151309..152163 | + | 855 | WP_095907150.1 | RCS-specific HTH-type transcriptional activator RclR | VF |
| GRI03_RS00810 () | 152397..152495 | - | 99 | Protein_161 | Rpn family recombination-promoting nuclease/putative transposase | - |
| GRI03_RS00815 () | 152614..153468 | - | 855 | WP_095907060.1 | IS3 family transposase ISEc14 | Transposase |
| GRI03_RS00820 () | 153465..153749 | - | 285 | WP_095907061.1 | IS3 family transposase ISEam1 | Transposase |
| GRI03_RS00825 () | 153832..154071 | - | 240 | WP_157735648.1 | SdpI family protein | - |
| GRI03_RS00830 () | 154230..154646 | - | 417 | WP_095907152.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GRI03_RS00835 () | 154643..154873 | - | 231 | WP_095907153.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| GRI03_RS00840 () | 155243..157293 | + | 2051 | Protein_167 | hypothetical protein | - |
| GRI03_RS00845 () | 157358..158140 | - | 783 | Protein_168 | IS21 family transposase ISSen8 | Transposase |
| GRI03_RS00850 () | 158137..159159 | - | 1023 | WP_095907091.1 | IS21 family transposase ISSen8 | Transposase |
| GRI03_RS00855 () | 159246..159843 | + | 598 | Protein_170 | IS110 family transposase ISEc21 | Transposase |
| GRI03_RS00860 () | 160143..161212 | + | 1070 | Protein_171 | IS110 family transposase | - |
| GRI03_RS00865 () | 161470..161775 | + | 306 | WP_095907154.1 | IS6 family transposase IS15 | Transposase |
| GRI03_RS00870 () | 162291..162623 | + | 333 | WP_095907155.1 | IS6 family transposase IS26 | Transposase |
| GRI03_RS00875 () | 162884..163348 | + | 465 | WP_095907157.1 | hypothetical protein | - |
| GRI03_RS00880 () | 163348..164136 | + | 789 | WP_095907158.1 | hypothetical protein | - |
| GRI03_RS00885 () | 164133..165368 | + | 1236 | WP_095907159.1 | TolC family protein | - |
| GRI03_RS00890 () | 165371..166627 | + | 1257 | WP_095907160.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| GRI03_RS00895 () | 166632..167099 | + | 468 | WP_095907161.1 | hypothetical protein | - |
| GRI03_RS00900 () | 167086..169038 | + | 1953 | WP_095907162.1 | ATP-binding cassette domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|