MGE detailed information
MGE type: Conjugative plasmid MGE length: 151033 bp
Accession: NZ_CP016498 Location: 1..151033 Organism: Escherichia coli strain UPEC 26-1 Replicon: plasmid unnamed1
Accession: NZ_CP016498 Location: 1..151033 Organism: Escherichia coli strain UPEC 26-1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BB344_RS25540 () | 528..875 | - | 348 | WP_000142452.1 | hypothetical protein | - |
| BB344_RS29420 () | 1004..1222 | + | 219 | WP_001336934.1 | hypothetical protein | - |
| BB344_RS30025 () | 2792..3436 | + | 645 | Protein_4 | replication initiation protein | - |
| BB344_RS25560 () | 3808..4683 | + | 876 | WP_001537591.1 | ChaN family lipoprotein | - |
| BB344_RS25565 () | 4691..5467 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| BB344_RS25570 () | 5636..7897 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| BB344_RS25575 () | 7966..9141 | + | 1176 | WP_001020413.1 | enterotoxin production-related protein TieB | - |
| BB344_RS30035 () | 9664..9969 | - | 306 | Protein_9 | IS91 family transposase | - |
| BB344_RS30040 () | 9995..10572 | + | 578 | Protein_10 | transposase | - |
| BB344_RS25590 () | 10463..11218 | - | 756 | WP_000065240.1 | IS21-like element ISEc10 family helper ATPase IstB | - |
| BB344_RS25595 () | 11215..12714 | - | 1500 | WP_000143800.1 | IS21-like element ISEc10 family transposase | - |
| BB344_RS28505 () | 12800..13150 | + | 351 | Protein_13 | IS3 family transposase | - |
| BB344_RS25615 () | 13823..15331 | + | 1509 | WP_032145081.1 | group II intron reverse transcriptase/maturase | - |
| BB344_RS29440 () | 15560..16594 | - | 1035 | Protein_15 | IS3 family transposase | - |
| BB344_RS25630 () | 16710..17114 | + | 405 | WP_000839179.1 | IS66 family insertion sequence hypothetical protein | - |
| BB344_RS25635 () | 17111..17458 | + | 348 | WP_000612626.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| BB344_RS25640 () | 17507..19045 | + | 1539 | WP_000099150.1 | IS66-like element ISEc22 family transposase | - |
| BB344_RS29445 () | 19084..19233 | + | 150 | Protein_19 | IS3 family transposase | - |
| BB344_RS25650 () | 19349..20197 | + | 849 | WP_001057995.1 | 3'-5' exonuclease | - |
| BB344_RS25655 () | 20314..20796 | + | 483 | WP_001337004.1 | hypothetical protein | - |
| BB344_RS29450 () | 21006..21266 | + | 261 | WP_001545316.1 | hypothetical protein | - |
| BB344_RS25665 () | 21373..21636 | + | 264 | WP_001089474.1 | hypothetical protein | - |
| BB344_RS25670 () | 21626..21925 | + | 300 | WP_000119542.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BB344_RS25675 () | 22283..22558 | + | 276 | WP_000877662.1 | bacteriocin immunity protein | - |
| BB344_RS25680 () | 22636..23823 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| BB344_RS25685 () | 23880..24641 | - | 762 | WP_000020504.1 | ABC transporter ATP-binding protein | - |
| BB344_RS25690 () | 24641..25678 | - | 1038 | WP_001545318.1 | iron ABC transporter permease | - |
| BB344_RS25695 () | 25678..26676 | - | 999 | WP_000756334.1 | ABC transporter substrate-binding protein | - |
| BB344_RS30045 () | 26826..26939 | - | 114 | Protein_30 | integrase core domain-containing protein | - |
| BB344_RS29460 () | 26932..27437 | - | 506 | Protein_31 | transposase | - |
| BB344_RS25710 () | 27762..28553 | + | 792 | WP_000456855.1 | AraC family transcriptional regulator | - |
| BB344_RS25715 () | 28758..29174 | - | 417 | WP_000466682.1 | SdiA-regulated domain-containing protein | - |
| BB344_RS25725 () | 29386..30614 | + | 1229 | WP_106378881.1 | IS3 family transposase | - |
| BB344_RS25730 () | 30894..31379 | - | 486 | WP_001545321.1 | Dr family adhesin structural subunit | - |
| BB344_RS25735 () | 31487..31909 | - | 423 | WP_000243157.1 | hypothetical protein | - |
| BB344_RS25740 () | 31925..34441 | - | 2517 | WP_162929852.1 | fimbria/pilus outer membrane usher protein | - |
| BB344_RS25745 () | 34504..35256 | - | 753 | WP_000471454.1 | fimbria/pilus periplasmic chaperone | - |
| BB344_RS25750 () | 35739..35987 | + | 249 | Protein_39 | IS21 family transposase | - |
| BB344_RS30050 () | 36042..36781 | + | 740 | Protein_40 | IS3-like element IS629 family transposase | - |
| BB344_RS25765 () | 37454..38962 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| BB344_RS25770 () | 39052..39525 | + | 474 | Protein_42 | IS3 family transposase | - |
| BB344_RS28560 () | 39528..40097 | - | 570 | WP_001336919.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| BB344_RS25775 () | 40199..41178 | + | 980 | Protein_44 | IS5 family transposase | - |
| BB344_RS25780 () | 41328..41960 | - | 633 | Protein_45 | histidine-type phosphatase | - |
| BB344_RS25785 () | 42082..42567 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| BB344_RS25790 () | 42592..43077 | - | 486 | WP_065726121.1 | TlpA family protein disulfide reductase | - |
| BB344_RS25795 () | 43064..43759 | - | 696 | WP_000117262.1 | ABC transporter ATP-binding protein | - |
| BB344_RS25800 () | 43764..44894 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| BB344_RS25805 () | 44884..46167 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| BB344_RS25810 () | 46170..47549 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| BB344_RS25815 () | 47653..48180 | - | 528 | WP_000178050.1 | iron transporter | - |
| BB344_RS25820 () | 48221..50107 | - | 1887 | WP_001332815.1 | FTR1 family iron permease | - |
| BB344_RS25825 () | 50454..51269 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| BB344_RS25830 () | 51602..52306 | + | 705 | WP_001067834.1 | IS6-like element IS26 family transposase | - |
| BB344_RS25835 () | 52428..53333 | + | 906 | WP_000219391.1 | Mph(A) family macrolide 2'-phosphotransferase | - |
| BB344_RS25840 () | 53330..54568 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| BB344_RS25845 () | 54568..55152 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| BB344_RS25855 () | 55645..56409 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| BB344_RS30410 () | 56527..56592 | - | 66 | Protein_60 | EAL domain-containing protein | - |
| BB344_RS25860 () | 56636..56941 | - | 306 | WP_000130000.1 | PadR family transcriptional regulator | - |
| BB344_RS25865 () | 56952..58157 | - | 1206 | WP_065726122.1 | chromate efflux transporter | - |
| BB344_RS25870 () | 58385..59389 | + | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| BB344_RS25875 () | 59571..59747 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| BB344_RS25880 () | 60077..60892 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| BB344_RS25885 () | 60953..61756 | + | 804 | WP_001082320.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| BB344_RS25890 () | 61756..62592 | + | 837 | WP_000480972.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| BB344_RS25895 () | 62823..63683 | - | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| BB344_RS25900 () | 63866..64423 | - | 558 | WP_001235713.1 | recombinase family protein | - |
| BB344_RS25905 () | 64587..67592 | + | 3006 | WP_001143760.1 | Tn3-like element Tn3 family transposase | - |
| BB344_RS25910 () | 67626..68342 | + | 717 | Protein_71 | Tn3 family transposase | - |
| BB344_RS25915 () | 68400..68642 | + | 243 | WP_000844627.1 | transposase | - |
| BB344_RS25920 () | 68674..69324 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| BB344_RS25925 () | 69430..70629 | + | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| BB344_RS25930 () | 70661..71545 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| BB344_RS25935 () | 71683..72090 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| BB344_RS25940 () | 72079..73830 | + | 1752 | Protein_77 | Tn3-like element TnAs1 family transposase | - |
| BB344_RS25945 () | 74045..75817 | - | 1773 | WP_001262767.1 | DUF262 domain-containing protein | - |
| BB344_RS25950 () | 76102..76503 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| BB344_RS30415 () | 76436..76693 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| BB344_RS25960 () | 76786..77439 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| BB344_RS25965 () | 78377..79234 | - | 858 | WP_001537577.1 | incFII family plasmid replication initiator RepA | - |
| BB344_RS25970 () | 79227..79301 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| BB344_RS25975 () | 79535..79792 | - | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| BB344_RS25980 () | 80077..80226 | - | 150 | WP_001336447.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 80274..80330 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 80274..80330 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 80274..80330 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 80274..80330 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| BB344_RS25985 () | 80425..80862 | - | 438 | WP_000872609.1 | hypothetical protein | - |
| BB344_RS25990 () | 81015..81398 | - | 384 | WP_001109264.1 | hypothetical protein | - |
| BB344_RS25995 () | 81501..81962 | - | 462 | WP_000760080.1 | thermonuclease family protein | - |
| BB344_RS26000 () | 82715..82918 | - | 204 | WP_001336517.1 | hypothetical protein | - |
| BB344_RS26005 () | 83070..83627 | - | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
| BB344_RS26010 () | 83682..84428 | - | 747 | WP_000205709.1 | conjugal transfer pilus acetylase TraX | - |
| BB344_RS26015 () | 84448..89718 | - | 5271 | WP_065726123.1 | conjugative transfer relaxase/helicase TraI | - |
| BB344_RS26020 () | 89718..91970 | - | 2253 | WP_065726124.1 | type IV conjugative transfer system coupling protein TraD | - |
| BB344_RS26025 () | 92021..92758 | - | 738 | WP_000199901.1 | hypothetical protein | - |
| BB344_RS26030 () | 92961..93692 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| BB344_RS26035 () | 93724..94221 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| BB344_RS26040 () | 94240..97059 | - | 2820 | WP_001537571.1 | conjugal transfer mating pair stabilization protein TraG | - |
| BB344_RS26045 () | 97056..98429 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| BB344_RS26050 () | 98416..98841 | - | 426 | WP_001336804.1 | F-type conjugal transfer protein TrbF | - |
| BB344_RS28610 () | 98762..99136 | - | 375 | WP_071586940.1 | P-type conjugative transfer protein TrbJ | - |
| BB344_RS26055 () | 99066..99611 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BB344_RS26060 () | 99598..99882 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BB344_RS26065 () | 99963..100223 | + | 261 | WP_000736412.1 | hypothetical protein | - |
| BB344_RS26070 () | 100279..100620 | - | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| BB344_RS26075 () | 100634..101377 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BB344_RS26080 () | 101370..101627 | - | 258 | WP_000864310.1 | conjugal transfer protein TrbE | - |
| BB344_RS26085 () | 101654..103504 | - | 1851 | WP_000826177.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BB344_RS26090 () | 103501..103923 | - | 423 | WP_001229309.1 | HNH endonuclease | - |
| BB344_RS26095 () | 103948..104319 | - | 372 | WP_000174465.1 | hypothetical protein | - |
| BB344_RS26100 () | 104316..104954 | - | 639 | WP_000087539.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BB344_RS26105 () | 104981..105499 | - | 519 | WP_000009088.1 | hypothetical protein | - |
| BB344_RS26110 () | 105562..105870 | - | 309 | WP_000412445.1 | hypothetical protein | - |
| BB344_RS26115 () | 105897..106889 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| BB344_RS26120 () | 106886..107518 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| BB344_RS26125 () | 107515..107838 | - | 324 | WP_072257200.1 | type-F conjugative transfer system protein TrbI | - |
| BB344_RS26130 () | 107897..110526 | - | 2630 | Protein_116 | type IV secretion system protein TraC | - |
| BB344_RS26140 () | 111191..111664 | - | 474 | WP_000549566.1 | hypothetical protein | - |
| BB344_RS26145 () | 111657..112070 | - | 414 | WP_000549574.1 | hypothetical protein | - |
| BB344_RS28620 () | 112063..112284 | - | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| BB344_RS26150 () | 112419..112934 | - | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BB344_RS26155 () | 112934..113284 | - | 351 | WP_071586941.1 | conjugal transfer protein TrbD | - |
| BB344_RS26160 () | 113238..113825 | - | 588 | WP_001309238.1 | conjugal transfer protein TraP | - |
| BB344_RS26165 () | 113794..115245 | - | 1452 | WP_000146663.1 | conjugal transfer protein TraB | - |
| BB344_RS26170 () | 115245..115973 | - | 729 | WP_001230767.1 | type-F conjugative transfer system secretin TraK | - |
| BB344_RS26175 () | 115960..116526 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| BB344_RS26180 () | 116548..116859 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| BB344_RS26185 () | 116874..117233 | - | 360 | WP_001099001.1 | type IV conjugative transfer system pilin TraA | - |
| BB344_RS26190 () | 117266..117661 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| BB344_RS26195 () | 117760..118449 | - | 690 | WP_000283387.1 | conjugal transfer transcriptional regulator TraJ | - |
| BB344_RS26200 () | 118636..119019 | - | 384 | WP_001151538.1 | relaxosome protein TraM | - |
| BB344_RS26205 () | 119340..119942 | + | 603 | Protein_131 | transglycosylase SLT domain-containing protein | - |
| BB344_RS26210 () | 120238..121059 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| BB344_RS26215 () | 121169..121465 | - | 297 | WP_001545326.1 | hypothetical protein | - |
| BB344_RS30420 () | 121857..122061 | + | 205 | Protein_134 | pilus protein | - |
| BB344_RS26235 () | 122362..122520 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 122564..122788 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 122564..122788 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 122564..122788 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 122564..122788 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| BB344_RS30425 () | 122600..122779 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| BB344_RS26245 () | 122800..123519 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| BB344_RS26250 () | 123516..123950 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| BB344_RS26255 () | 124019..125983 | - | 1965 | WP_001537566.1 | ParB/RepB/Spo0J family partition protein | - |
| BB344_RS26260 () | 126044..126277 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| BB344_RS26265 () | 126335..126862 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| BB344_RS26275 () | 127164..127601 | + | 438 | WP_024185955.1 | hypothetical protein | - |
| BB344_RS26280 () | 127687..128250 | - | 564 | WP_001309257.1 | class I SAM-dependent methyltransferase | - |
| BB344_RS26285 () | 128296..129657 | - | 1362 | WP_000170705.1 | DUF3560 domain-containing protein | - |
| BB344_RS26290 () | 129709..129939 | - | 231 | WP_001537563.1 | hypothetical protein | - |
| BB344_RS30625 () | 130620..130928 | + | 309 | WP_050576143.1 | hypothetical protein | - |
| BB344_RS26295 () | 130907..131098 | - | 192 | WP_001027049.1 | hypothetical protein | - |
| BB344_RS26300 () | 131098..131559 | - | 462 | WP_046881848.1 | DUF1380 family protein | - |
| BB344_RS26305 () | 131559..131861 | - | 303 | WP_001364029.1 | antirestriction protein | - |
| BB344_RS30440 () | 132398..133168 | - | 771 | WP_001044390.1 | hypothetical protein | - |
| BB344_RS26320 () | 133213..133647 | - | 435 | WP_000274451.1 | DUF1380 family protein | - |
| BB344_RS26325 () | 133661..133882 | - | 222 | WP_001104892.1 | hypothetical protein | - |
| BB344_RS26330 () | 133883..134566 | - | 684 | WP_000086171.1 | DNA methylase | - |
| BB344_RS29490 () | 134642..134953 | - | 312 | WP_001309256.1 | hypothetical protein | - |
| BB344_RS30095 () | 135017..135376 | - | 360 | WP_001336695.1 | DUF1281 domain-containing protein | - |
| BB344_RS30100 () | 135383..135526 | - | 144 | WP_000270807.1 | DUF1281 domain-containing protein | - |
| BB344_RS28665 () | 135692..136468 | - | 777 | Protein_157 | hypothetical protein | - |
| BB344_RS26350 () | 136702..137664 | - | 963 | WP_000756328.1 | ParB/RepB/Spo0J family partition protein | - |
| BB344_RS26355 () | 137661..138866 | - | 1206 | WP_000817635.1 | AAA family ATPase | - |
| BB344_RS26365 () | 139624..139875 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| BB344_RS26370 () | 139872..140159 | + | 288 | WP_001270422.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BB344_RS28675 () | 140161..140572 | + | 412 | Protein_162 | DDE-type integrase/transposase/recombinase | - |
| BB344_RS26385 () | 141216..142193 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| BB344_RS26390 () | 142436..143176 | - | 741 | WP_001066947.1 | tyrosine-type recombinase/integrase | - |
| BB344_RS26395 () | 143297..143485 | - | 189 | WP_001332784.1 | hypothetical protein | - |
| BB344_RS26400 () | 143852..145021 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| BB344_RS30110 () | 145247..145422 | - | 176 | Protein_167 | IS3 family transposase | - |
| BB344_RS28685 () | 145868..146140 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| BB344_RS26410 () | 146665..147101 | - | 437 | Protein_169 | transposase | - |
| BB344_RS26415 () | 147191..147670 | - | 480 | Protein_170 | IS3 family transposase | - |
| BB344_RS26420 () | 147754..149262 | - | 1509 | WP_032145081.1 | group II intron reverse transcriptase/maturase | - |
| BB344_RS30115 () | 149934..150673 | - | 740 | Protein_172 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|