MGE detailed information
MGE type: Prophage MGE length: 98066 bp
Accession: NZ_CP015832 Location: 2641866..2739931 Organism: Escherichia coli O157 strain 180-PT54 Replicon: chromosome
Accession: NZ_CP015832 Location: 2641866..2739931 Organism: Escherichia coli O157 strain 180-PT54 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8L39_RS13710 () | 2638115..2640541 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| A8L39_RS13715 () | 2640740..2641045 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| A8L39_RS13720 () | 2641153..2641863 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| A8L39_RS13725 () | 2641866..2642426 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| A8L39_RS13730 () | 2642461..2642802 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| A8L39_RS13735 () | 2642937..2643263 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| A8L39_RS33705 () | 2644033..2644217 | - | 185 | Protein_2624 | DUF3596 domain-containing protein | - |
| A8L39_RS13745 () | 2644252..2644503 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| A8L39_RS13750 () | 2644576..2647047 | - | 2472 | WP_000048458.1 | exonuclease | - |
| A8L39_RS13755 () | 2647140..2647331 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| A8L39_RS13760 () | 2647328..2647516 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| A8L39_RS13765 () | 2648085..2648303 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| A8L39_RS13770 () | 2648375..2648674 | - | 300 | WP_072143447.1 | hypothetical protein | - |
| A8L39_RS13780 () | 2649027..2649305 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A8L39_RS13785 () | 2649307..2649498 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| A8L39_RS32400 () | 2649519..2649890 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| A8L39_RS13795 () | 2649988..2650290 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| A8L39_RS13800 () | 2650287..2650712 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| A8L39_RS13805 () | 2650735..2651697 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| A8L39_RS13810 () | 2651704..2652444 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| A8L39_RS13820 () | 2652470..2653239 | + | 770 | Protein_2638 | DUF1627 domain-containing protein | - |
| A8L39_RS13825 () | 2653255..2653650 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| A8L39_RS13830 () | 2653707..2654291 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| A8L39_RS32405 () | 2654407..2654511 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| A8L39_RS13840 () | 2654757..2654912 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| A8L39_RS32410 () | 2655080..2655358 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| A8L39_RS13850 () | 2655360..2656409 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| A8L39_RS13855 () | 2656422..2656781 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| A8L39_RS13860 () | 2656778..2657467 | + | 690 | WP_001059381.1 | antiterminator | - |
| A8L39_RS13880 () | 2658104..2658532 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| A8L39_RS13885 () | 2658529..2658784 | + | 256 | Protein_2648 | DUF3927 family protein | - |
| A8L39_RS13895 () | 2659011..2660861 | + | 1851 | WP_064234946.1 | SASA family carbohydrate esterase | - |
| A8L39_RS13905 () | 2661301..2661516 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| A8L39_RS13910 () | 2661521..2661865 | + | 345 | WP_000731241.1 | YdfR family protein | - |
| A8L39_RS13915 () | 2661916..2662449 | + | 534 | WP_000992137.1 | lysozyme | - |
| A8L39_RS13920 () | 2662720..2663289 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| A8L39_RS33710 () | 2663289..2663435 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| A8L39_RS33720 () | 2663663..2663848 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| A8L39_RS13935 () | 2664273..2664500 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| A8L39_RS13940 () | 2664542..2664907 | + | 366 | WP_000279796.1 | HNH endonuclease | - |
| A8L39_RS13950 () | 2665198..2665761 | + | 564 | WP_000958387.1 | terminase small subunit | - |
| A8L39_RS13955 () | 2665758..2667419 | + | 1662 | WP_001301491.1 | terminase large subunit | - |
| A8L39_RS13960 () | 2667483..2669420 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| A8L39_RS13965 () | 2669465..2669686 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| A8L39_RS13970 () | 2669632..2671971 | + | 2340 | WP_106378527.1 | phage portal protein | - |
| A8L39_RS13975 () | 2672051..2672377 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| A8L39_RS13980 () | 2672387..2672737 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| A8L39_RS13985 () | 2672734..2673180 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| A8L39_RS13990 () | 2673177..2673521 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| A8L39_RS13995 () | 2673580..2674296 | + | 717 | WP_001275508.1 | tail protein | - |
| A8L39_RS14000 () | 2674302..2674676 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| A8L39_RS14005 () | 2674772..2674981 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| A8L39_RS14010 () | 2675034..2678276 | + | 3243 | WP_064234948.1 | phage tail tape measure protein | - |
| A8L39_RS14015 () | 2678269..2678610 | + | 342 | WP_000807956.1 | phage tail protein | - |
| A8L39_RS14020 () | 2678610..2679047 | + | 438 | WP_001179509.1 | phage minor tail protein L | - |
| A8L39_RS14025 () | 2679235..2682713 | + | 3479 | Protein_2673 | host specificity protein J | - |
| A8L39_RS14035 () | 2682781..2683380 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| A8L39_RS14040 () | 2683445..2684659 | + | 1215 | WP_064234952.1 | phage tail protein | - |
| A8L39_RS14045 () | 2684661..2684930 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| A8L39_RS30640 () | 2685044..2685397 | + | 354 | Protein_2677 | T3SS effector NleG family protein | - |
| A8L39_RS33725 () | 2686107..2686757 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| A8L39_RS14060 () | 2686907..2687302 | + | 396 | Protein_2679 | IS256 family transposase ISEic2 | Transposase |
| A8L39_RS14065 () | 2687340..2688878 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| A8L39_RS14070 () | 2688928..2689275 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| A8L39_RS14075 () | 2689272..2689652 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| A8L39_RS30645 () | 2689747..2690565 | + | 819 | Protein_2683 | IS256 family transposase IS1414 | Transposase |
| A8L39_RS14085 () | 2690615..2690857 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| A8L39_RS14090 () | 2691035..2691586 | - | 552 | Protein_2685 | Putative defective protein IntQ ; Integrase | Integrase |
| A8L39_RS14095 () | 2691574..2692812 | - | 1239 | Protein_2686 | exonuclease | - |
| A8L39_RS14100 () | 2692905..2693093 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| A8L39_RS14105 () | 2693090..2693278 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| A8L39_RS14115 () | 2693843..2694052 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| A8L39_RS14120 () | 2694053..2694691 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| A8L39_RS14125 () | 2694703..2694855 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| A8L39_RS33730 () | 2695148..2695486 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| A8L39_RS14135 () | 2695878..2696120 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| A8L39_RS14140 () | 2696104..2696529 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| A8L39_RS33735 () | 2696598..2697641 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| A8L39_RS32445 () | 2697634..2698095 | + | 462 | WP_000139447.1 | replication protein | - |
| A8L39_RS14155 () | 2698129..2698845 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| A8L39_RS14160 () | 2698878..2699159 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| A8L39_RS14165 () | 2699156..2699383 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| A8L39_RS14170 () | 2699376..2699687 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| A8L39_RS14175 () | 2699815..2700033 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| A8L39_RS14180 () | 2700035..2700592 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| - () | 2700813..2700871 | - | 59 | - | - | Antitoxin Detail |
| A8L39_RS14185 () | 2700883..2701038 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| A8L39_RS14190 () | 2701158..2701502 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| A8L39_RS14195 () | 2701624..2701896 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| A8L39_RS14200 () | 2701898..2702947 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| A8L39_RS14205 () | 2702960..2703265 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| A8L39_RS14210 () | 2703328..2703882 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| A8L39_RS33280 () | 2704107..2704304 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| A8L39_RS14220 () | 2704440..2705153 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| A8L39_RS14235 () | 2705604..2706035 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| A8L39_RS14240 () | 2706032..2706287 | + | 256 | Protein_2712 | DUF3927 family protein | - |
| A8L39_RS14245 () | 2706513..2708363 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| A8L39_RS14255 () | 2708803..2709018 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| A8L39_RS14260 () | 2709023..2709367 | + | 345 | WP_000731241.1 | YdfR family protein | - |
| A8L39_RS14265 () | 2709418..2709951 | + | 534 | WP_000992137.1 | lysozyme | - |
| A8L39_RS14270 () | 2710222..2710791 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| A8L39_RS33740 () | 2710791..2710937 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| A8L39_RS33745 () | 2711160..2711345 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| A8L39_RS14285 () | 2711871..2712185 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| A8L39_RS14290 () | 2712267..2712491 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| A8L39_RS14295 () | 2712878..2713423 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| A8L39_RS14300 () | 2713398..2715323 | + | 1926 | WP_001027230.1 | phage terminase large subunit family protein | - |
| A8L39_RS14305 () | 2715320..2715526 | + | 207 | WP_000198153.1 | gpW family protein | - |
| A8L39_RS14310 () | 2715523..2717124 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| A8L39_RS14315 () | 2717105..2718424 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| A8L39_RS14320 () | 2718434..2718766 | + | 333 | WP_001295978.1 | head decoration protein | - |
| A8L39_RS14325 () | 2718822..2719847 | + | 1026 | WP_000063265.1 | major capsid protein | - |
| A8L39_RS14330 () | 2719889..2720287 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| A8L39_RS14335 () | 2720299..2720652 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| A8L39_RS14340 () | 2720667..2721200 | + | 534 | WP_000975020.1 | phage tail protein | - |
| A8L39_RS14345 () | 2721197..2721592 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| A8L39_RS14350 () | 2721600..2722352 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| A8L39_RS14355 () | 2722366..2722788 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| A8L39_RS14360 () | 2722815..2723228 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| A8L39_RS14365 () | 2723209..2725821 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| A8L39_RS14370 () | 2725818..2726147 | + | 330 | WP_000847298.1 | phage tail protein | - |
| A8L39_RS14375 () | 2726147..2726845 | + | 699 | WP_001151106.1 | phage minor tail protein L | - |
| A8L39_RS14380 () | 2726856..2727599 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| A8L39_RS14385 () | 2727545..2728174 | + | 630 | WP_071601640.1 | tail assembly protein | - |
| A8L39_RS14390 () | 2728415..2731894 | + | 3480 | WP_064234939.1 | host specificity protein J | - |
| A8L39_RS14395 () | 2731962..2732561 | + | 600 | WP_001230509.1 | Outer membrane protein X | VF |
| A8L39_RS14400 () | 2732626..2733939 | + | 1314 | WP_046671432.1 | ISNCY family transposase KIS | Transposase |
| A8L39_RS14405 () | 2733941..2734210 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| A8L39_RS14410 () | 2734324..2734899 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| A8L39_RS32460 () | 2734972..2735601 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| A8L39_RS14420 () | 2735683..2736324 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| A8L39_RS14425 () | 2736486..2736728 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| A8L39_RS14430 () | 2736860..2738143 | + | 1284 | Protein_2749 | MHS family MFS transporter YdfJ | - |
| A8L39_RS14435 () | 2738232..2739692 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| A8L39_RS14440 () | 2739728..2739931 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| A8L39_RS14445 () | 2740108..2740794 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| A8L39_RS14450 () | 2740883..2741629 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| A8L39_RS14455 () | 2741766..2743811 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| A8L39_RS14460 () | 2743856..2744374 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA1008 | NC_002695 | 2157035..2254487 | 0.006 |