MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 87576 bp
Accession: NZ_CP015380 Location: 1..87576 Organism: Hafnia alvei strain HUMV-5920 Replicon: plasmid unnamed
Accession: NZ_CP015380 Location: 1..87576 Organism: Hafnia alvei strain HUMV-5920 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6V27_RS20640 () | 322..1521 | + | 1200 | WP_040046655.1 | AAA family ATPase | - |
| A6V27_RS20645 () | 1529..2500 | + | 972 | WP_040046654.1 | ParB/RepB/Spo0J family partition protein | - |
| A6V27_RS20650 () | 4168..4710 | + | 543 | WP_063587656.1 | Major fimbrial subunit | VF |
| A6V27_RS20655 () | 4789..5331 | + | 543 | WP_040046652.1 | PAP fimbrial minor pilin protein | VF |
| A6V27_RS20660 () | 5510..7984 | + | 2475 | WP_063587657.1 | Outer membrane usher protein PapC | VF |
| A6V27_RS20665 () | 8032..8793 | + | 762 | WP_040046650.1 | Chaperone protein PapD | VF |
| A6V27_RS20670 () | 8814..9425 | + | 612 | WP_040046649.1 | type 1 fimbrial protein | - |
| A6V27_RS20675 () | 9425..10483 | + | 1059 | WP_040046648.1 | putative minor fimbrial subunit LpfD | VF |
| A6V27_RS20680 () | 10502..11050 | + | 549 | WP_040046647.1 | Major MR/P fimbria protein | VF |
| A6V27_RS20685 () | 11064..11738 | + | 675 | WP_040046646.1 | response regulator transcription factor | - |
| A6V27_RS20690 () | 11813..13407 | + | 1595 | Protein_10 | O-antigen ligase C-terminal domain-containing protein | - |
| A6V27_RS21605 () | 15903..16587 | + | 685 | Protein_11 | IS1 family transposase | - |
| A6V27_RS20705 () | 18072..19010 | + | 939 | WP_040046643.1 | hypothetical protein | - |
| A6V27_RS20710 () | 19132..19977 | + | 846 | WP_063587658.1 | Autotransporter adhesin EhaG | VF |
| A6V27_RS20715 () | 19917..24023 | + | 4107 | WP_145916013.1 | hypothetical protein | - |
| A6V27_RS20720 () | 24160..24957 | + | 798 | WP_145916014.1 | Autotransporter adhesin SadA | VF |
| A6V27_RS20725 () | 25135..25698 | + | 564 | WP_040047314.1 | hypothetical protein | - |
| A6V27_RS20730 () | 25835..26605 | + | 771 | WP_063587661.1 | putative cyclic di-GMP phosphodiesterase PdeN | VF |
| A6V27_RS20735 () | 27759..28286 | + | 528 | WP_046448642.1 | single-stranded DNA-binding protein | - |
| A6V27_RS20740 () | 28473..28772 | + | 300 | WP_063587662.1 | hypothetical protein | - |
| A6V27_RS20745 () | 29027..29317 | - | 291 | WP_046448644.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A6V27_RS20750 () | 29307..29561 | - | 255 | WP_046448645.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| A6V27_RS21310 () | 29697..29930 | - | 234 | Protein_22 | tyrosine-type recombinase/integrase | - |
| A6V27_RS21820 () | 30333..30470 | - | 138 | WP_155403049.1 | hypothetical protein | - |
| A6V27_RS20755 () | 30704..32254 | + | 1551 | WP_063587663.1 | type IV secretion system DNA-binding domain-containing protein | - |
| A6V27_RS20760 () | 32261..32659 | - | 399 | WP_040047086.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| A6V27_RS20765 () | 32659..32886 | - | 228 | WP_040047085.1 | antitoxin | Antitoxin Detail |
| A6V27_RS20770 () | 32999..33328 | + | 330 | WP_063587664.1 | Multifunctional conjugation protein TraI | Relaxase |
| A6V27_RS20775 () | 33306..35588 | + | 2283 | WP_081250340.1 | AAA family ATPase | - |
| A6V27_RS21315 () | 36258..37268 | - | 1011 | Protein_29 | IS110 family transposase IS1663 | Transposase |
| A6V27_RS20790 () | 37660..37893 | + | 234 | WP_040047079.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| A6V27_RS20795 () | 37896..38210 | + | 315 | WP_040047078.1 | CcdB family protein | Toxin Detail |
| A6V27_RS21610 () | 38467..38637 | - | 171 | WP_193764314.1 | hypothetical protein | - |
| A6V27_RS20800 () | 38735..39529 | + | 795 | WP_052439989.1 | lysine exporter LysO family protein | - |
| A6V27_RS20805 () | 39687..40466 | + | 780 | WP_040047077.1 | MBL fold metallo-hydrolase | - |
| A6V27_RS20810 () | 40595..41569 | + | 975 | WP_040047076.1 | helix-turn-helix domain-containing protein | - |
| A6V27_RS21615 () | 41961..42839 | - | 879 | Protein_36 | IS110 family transposase | - |
| A6V27_RS20820 () | 44383..45447 | - | 1065 | WP_046448653.1 | FUSC family protein | - |
| A6V27_RS21620 () | 45819..46515 | - | 697 | Protein_38 | IS1 family transposase IS1N | Transposase |
| A6V27_RS20830 () | 46852..48306 | - | 1455 | WP_040046856.1 | DASS family sodium-coupled anion symporter | - |
| A6V27_RS20835 () | 48387..50051 | - | 1665 | WP_193764321.1 | NAD-dependent malic enzyme | - |
| A6V27_RS20840 () | 51769..58311 | + | 6543 | WP_063587666.1 | Invasin | VF |
| A6V27_RS20845 () | 58482..58898 | + | 417 | WP_130986416.1 | FxLYD domain-containing protein | - |
| A6V27_RS20850 () | 59239..60387 | + | 1149 | WP_046450520.1 | mechanosensitive ion channel | - |
| A6V27_RS20855 () | 60916..61449 | - | 534 | WP_040046853.1 | hypothetical protein | VF |
| A6V27_RS21340 () | 61548..61748 | - | 201 | WP_071892874.1 | selenium-binding protein | - |
| A6V27_RS20860 () | 61770..62615 | - | 846 | WP_052439973.1 | RNA polymerase sigma factor RpoH | - |
| A6V27_RS20865 () | 63078..64228 | + | 1151 | Protein_47 | cyclopropane fatty acyl phospholipid synthase | - |
| A6V27_RS21345 () | 64908..65759 | + | 852 | Protein_48 | DUF4158 domain-containing protein | - |
| A6V27_RS20875 () | 65838..66510 | - | 673 | Protein_49 | IS6 family transposase | - |
| A6V27_RS20880 () | 66854..67234 | + | 381 | WP_040046852.1 | hypothetical protein | - |
| A6V27_RS20885 () | 68011..68625 | + | 615 | WP_040046851.1 | DNA-binding transcriptional activator EvgA | VF |
| A6V27_RS20895 () | 69172..69516 | - | 345 | Protein_52 | IS3 family transposase IS3411 | Transposase |
| A6V27_RS20905 () | 70550..71068 | + | 519 | WP_040046849.1 | DUF1440 domain-containing protein | - |
| A6V27_RS21625 () | 71345..72041 | + | 697 | Protein_54 | IS1 family transposase | - |
| A6V27_RS20915 () | 72112..73422 | - | 1311 | WP_063587667.1 | C4-dicarboxylate transport transcriptional regulatory protein DctD | VF |
| A6V27_RS20920 () | 73436..75268 | - | 1833 | WP_052439957.1 | C4-dicarboxylate transport sensor protein DctB | VF |
| A6V27_RS20925 () | 75706..77394 | + | 1689 | WP_145916015.1 | aspartate-alanine antiporter | - |
| A6V27_RS20930 () | 77410..78999 | + | 1590 | WP_130986922.1 | bifunctional aspartate transaminase/aspartate 4-decarboxylase | - |
| A6V27_RS20935 () | 79576..80319 | - | 744 | WP_040046660.1 | DUF1275 family protein | - |
| A6V27_RS20940 () | 81035..81826 | + | 792 | WP_162493065.1 | tyrosine-type recombinase/integrase | - |
| A6V27_RS20945 () | 81823..82425 | - | 603 | WP_063587668.1 | DUF2913 family protein | - |
| A6V27_RS21365 () | 82634..83067 | - | 434 | Protein_62 | Rpn family recombination-promoting nuclease/putative transposase | - |
| A6V27_RS20955 () | 86655..87403 | - | 749 | Protein_63 | replication initiation protein RepE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|