MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP014348 Location: 2546240..2578120 Organism: Escherichia coli str. K-12 substr. MG1655 strain JW5437-1 Replicon: chromosome
Accession: NZ_CP014348 Location: 2546240..2578120 Organism: Escherichia coli str. K-12 substr. MG1655 strain JW5437-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWN69_RS12555 () | 2542424..2543692 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| AWN69_RS12560 () | 2543712..2544689 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| AWN69_RS25795 () | 2545025..2547277 | - | 2253 | Protein_2381 | hypothetical protein | - |
| AWN69_RS25800 () | 2548663..2550036 | + | 1374 | Protein_2382 | DUF5507 domain-containing protein | - |
| AWN69_RS24155 () | 2550400..2550609 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| AWN69_RS24165 () | 2550764..2550883 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| AWN69_RS25240 () | 2550948..2555528 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| AWN69_RS12600 () | 2555892..2556221 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| AWN69_RS12605 () | 2556242..2556559 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| AWN69_RS24215 () | 2556597..2556797 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| AWN69_RS12610 () | 2556806..2557288 | - | 483 | WP_001407480.1 | RadC family protein | - |
| AWN69_RS12615 () | 2557297..2557755 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| AWN69_RS24220 () | 2557858..2558081 | - | 224 | Protein_2391 | DUF905 family protein | - |
| AWN69_RS12620 () | 2558653..2560356 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| AWN69_RS12625 () | 2560498..2561507 | + | 1010 | Protein_2393 | arsenic transporter | - |
| AWN69_RS12630 () | 2561520..2561834 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| AWN69_RS12635 () | 2562059..2562526 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| AWN69_RS12640 () | 2562550..2562993 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| AWN69_RS12645 () | 2562993..2563229 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| AWN69_RS12650 () | 2563270..2563971 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| AWN69_RS12655 () | 2564188..2565009 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| AWN69_RS12660 () | 2565101..2565964 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| AWN69_RS12665 () | 2566319..2566690 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| AWN69_RS12670 () | 2566683..2567756 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| AWN69_RS12675 () | 2567898..2568161 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| AWN69_RS12680 () | 2568521..2570137 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| AWN69_RS12685 () | 2570134..2572323 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| AWN69_RS12690 () | 2572501..2573127 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| AWN69_RS12695 () | 2573280..2574689 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| AWN69_RS12700 () | 2574818..2575030 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| AWN69_RS12705 () | 2575074..2576030 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| AWN69_RS12710 () | 2576274..2577515 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| AWN69_RS12720 () | 2578296..2578778 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| AWN69_RS12725 () | 2578949..2579386 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| AWN69_RS12730 () | 2579376..2579666 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| AWN69_RS12735 () | 2579728..2580069 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| AWN69_RS12740 () | 2580218..2581879 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| AWN69_RS12745 () | 2581965..2582843 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |