MGE detailed information
MGE type: Conjugative plasmid MGE length: 130603 bp
Accession: NZ_CP014320 Location: 1..130603 Organism: Escherichia coli JJ1887 Replicon: plasmid pJJ1887-5
Accession: NZ_CP014320 Location: 1..130603 Organism: Escherichia coli JJ1887 Replicon: plasmid pJJ1887-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AX202_RS25560 () | 306..563 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| AX202_RS26965 () | 847..1053 | - | 207 | WP_032215358.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 1040..1101 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1040..1101 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1040..1101 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1040..1101 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| AX202_RS30625 () | 1240..1506 | - | 267 | WP_087757657.1 | hypothetical protein | - |
| AX202_RS25575 () | 1881..2450 | - | 570 | WP_029702150.1 | DUF2726 domain-containing protein | - |
| AX202_RS25580 () | 2602..3228 | - | 627 | WP_029702149.1 | hypothetical protein | - |
| AX202_RS25585 () | 3640..3849 | - | 210 | WP_039023209.1 | hypothetical protein | - |
| AX202_RS25590 () | 3980..4540 | - | 561 | WP_001567328.1 | fertility inhibition protein FinO | - |
| AX202_RS25595 () | 4595..5341 | - | 747 | WP_052273601.1 | conjugal transfer pilus acetylase TraX | - |
| AX202_RS25600 () | 5369..6115 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| AX202_RS25605 () | 6130..7671 | - | 1542 | WP_002431311.1 | IS21 family transposase ISEc12 | Transposase |
| AX202_RS25610 () | 7947..13217 | - | 5271 | WP_061856951.1 | Multifunctional conjugation protein TraI | Relaxase |
| AX202_RS25615 () | 13299..13526 | + | 228 | WP_039023146.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| AX202_RS25620 () | 13526..13924 | + | 399 | WP_039023147.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| AX202_RS25625 () | 13933..16131 | - | 2199 | WP_061856952.1 | type IV conjugative transfer system coupling protein TraD | - |
| AX202_RS25630 () | 16384..17115 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| AX202_RS25635 () | 17147..17644 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| AX202_RS25640 () | 17663..20482 | - | 2820 | WP_039023149.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AX202_RS25645 () | 20479..21852 | - | 1374 | WP_039023150.1 | conjugal transfer protein TraH | - |
| AX202_RS25650 () | 21852..22214 | - | 363 | WP_071550055.1 | P-type conjugative transfer protein TrbJ | - |
| AX202_RS25655 () | 22144..22689 | - | 546 | WP_039052470.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AX202_RS25660 () | 22676..22960 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AX202_RS25665 () | 23079..23426 | - | 348 | WP_001287894.1 | conjugal transfer protein TrbA | - |
| AX202_RS25670 () | 23442..24185 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AX202_RS25675 () | 24178..24435 | - | 258 | WP_039023152.1 | conjugal transfer protein TrbE | - |
| AX202_RS25680 () | 24462..26249 | - | 1788 | WP_039052473.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AX202_RS25685 () | 26560..26940 | - | 381 | WP_039052469.1 | hypothetical protein | - |
| AX202_RS25690 () | 26937..27575 | - | 639 | WP_039052468.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AX202_RS25695 () | 27584..28576 | - | 993 | WP_000830835.1 | conjugal transfer pilus assembly protein TraU | - |
| AX202_RS25700 () | 28573..29205 | - | 633 | WP_039052467.1 | type-F conjugative transfer system protein TraW | - |
| AX202_RS25705 () | 29202..29588 | - | 387 | WP_000099693.1 | type-F conjugative transfer system protein TrbI | - |
| AX202_RS25710 () | 29585..32212 | - | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| AX202_RS28735 () | 32372..32593 | - | 222 | WP_001278685.1 | conjugal transfer protein TraR | - |
| AX202_RS25715 () | 32728..33243 | - | 516 | WP_039052466.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AX202_RS25720 () | 33240..33491 | - | 252 | WP_039052465.1 | conjugal transfer protein TrbG | - |
| AX202_RS25725 () | 33484..33852 | - | 369 | WP_071550054.1 | conjugal transfer protein TrbD | - |
| AX202_RS25730 () | 33791..34372 | - | 582 | WP_052273600.1 | conjugal transfer protein TraP | - |
| AX202_RS25735 () | 34341..35792 | - | 1452 | WP_039052463.1 | conjugal transfer protein TraB | - |
| AX202_RS25740 () | 35792..36496 | - | 705 | WP_148936096.1 | type-F conjugative transfer system secretin TraK | - |
| AX202_RS25745 () | 36507..37073 | - | 567 | WP_039052461.1 | type IV conjugative transfer system protein TraE | - |
| AX202_RS25750 () | 37095..37406 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| AX202_RS25755 () | 37411..37773 | - | 363 | WP_039052460.1 | type IV conjugative transfer system pilin TraA | - |
| AX202_RS25760 () | 37806..38201 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| AX202_RS25765 () | 38300..38989 | - | 690 | WP_061856953.1 | conjugal transfer transcriptional regulator TraJ | - |
| AX202_RS25770 () | 39176..39559 | - | 384 | WP_061856954.1 | relaxosome protein TraM | - |
| AX202_RS25775 () | 39879..40481 | + | 603 | WP_077878371.1 | hypothetical protein | VF |
| AX202_RS25780 () | 40777..41598 | - | 822 | WP_061856956.1 | DUF945 domain-containing protein | - |
| AX202_RS25785 () | 41717..42004 | - | 288 | WP_061856957.1 | hypothetical protein | - |
| AX202_RS30630 () | 42305..42633 | + | 329 | Protein_49 | hypothetical protein | - |
| AX202_RS29580 () | 42624..42755 | + | 132 | Protein_50 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AX202_RS25805 () | 42835..43532 | - | 698 | Protein_51 | IS1 family transposase IS1G | Transposase |
| AX202_RS28750 () | 43705..44322 | + | 618 | Protein_52 | ISL3 family transposase ISEc38 | Transposase |
| AX202_RS25810 () | 44786..45801 | - | 1016 | Protein_53 | LacI family DNA-binding transcriptional regulator | - |
| AX202_RS25815 () | 45818..47227 | - | 1410 | WP_039052598.1 | sucrose-6-phosphate hydrolase | - |
| AX202_RS25820 () | 47227..48597 | - | 1371 | WP_000344915.1 | sucrose-specific PTS transporter subunit IIBC | - |
| AX202_RS25825 () | 48658..50175 | - | 1518 | WP_039052597.1 | carbohydrate porin | - |
| AX202_RS25830 () | 50343..51263 | - | 921 | WP_039052596.1 | aminoimidazole riboside kinase | - |
| AX202_RS30635 () | 51624..51982 | + | 359 | Protein_58 | pilus protein | - |
| AX202_RS25840 () | 51963..52526 | - | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| AX202_RS25845 () | 52574..53935 | - | 1362 | WP_039052595.1 | DUF3560 domain-containing protein | - |
| AX202_RS28760 () | 53987..54216 | - | 230 | Protein_61 | hypothetical protein | - |
| AX202_RS25855 () | 55169..55360 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| AX202_RS25860 () | 55409..55711 | - | 303 | WP_077878372.1 | antirestriction protein | - |
| AX202_RS30640 () | 56250..56699 | - | 450 | Protein_64 | hypothetical protein | - |
| AX202_RS25875 () | 56876..57232 | + | 357 | WP_039052614.1 | hypothetical protein | - |
| AX202_RS25880 () | 57270..57923 | + | 654 | WP_039052615.1 | hypothetical protein | - |
| AX202_RS25885 () | 58037..58734 | + | 698 | Protein_67 | IS1 family transposase IS1G | Transposase |
| AX202_RS25890 () | 58873..59570 | + | 698 | Protein_68 | IS1 family transposase IS1G | Transposase |
| AX202_RS25895 () | 59591..59824 | - | 234 | Protein_69 | sodium/glutamate symporter | - |
| AX202_RS25900 () | 60268..60588 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| AX202_RS25905 () | 60581..60967 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| AX202_RS25910 () | 60975..61661 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| AX202_RS25915 () | 61639..62262 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| AX202_RS25920 () | 62344..63549 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| AX202_RS25925 () | 63662..64255 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| AX202_RS25930 () | 64388..64759 | + | 372 | WP_035689358.1 | Transposon Tn10 TetD protein | VF |
| AX202_RS25935 () | 64769..65986 | - | 1218 | WP_061856962.1 | IS4 family transposase IS10R | Transposase |
| AX202_RS25945 () | 66008..67128 | + | 1121 | WP_087758690.1 | IS3 family transposase ISSen4 | Transposase |
| AX202_RS25950 () | 68111..68887 | + | 777 | WP_039052454.1 | hypothetical protein | - |
| AX202_RS25955 () | 68889..71153 | + | 2265 | WP_039052447.1 | UvrD-helicase domain-containing protein | - |
| AX202_RS25960 () | 71496..72476 | + | 981 | WP_039052448.1 | IS5 family transposase ISKpn26 | Transposase |
| AX202_RS29605 () | 72890..73980 | + | 1091 | Protein_82 | translesion error-prone DNA polymerase V subunit UmuC | - |
| AX202_RS25970 () | 73985..74377 | - | 393 | WP_039052449.1 | plasmid partitioning/stability family protein | - |
| AX202_RS25975 () | 74382..75353 | - | 972 | WP_039052450.1 | plasmid segregation protein parM | - |
| AX202_RS25980 () | 75582..76226 | + | 645 | WP_000633913.1 | AAA family ATPase | - |
| AX202_RS25985 () | 76220..76495 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| AX202_RS25990 () | 76633..77133 | - | 501 | Protein_87 | IS91 family transposase ISAzo26 | Transposase |
| AX202_RS29610 () | 77115..77354 | - | 240 | WP_157916581.1 | resolvase | - |
| AX202_RS25995 () | 77461..78069 | - | 609 | WP_039052451.1 | hypothetical protein | - |
| AX202_RS26000 () | 78139..78489 | - | 351 | WP_039052452.1 | hypothetical protein | - |
| AX202_RS26005 () | 79167..80162 | + | 996 | WP_000246635.1 | hypothetical protein | - |
| AX202_RS26010 () | 80166..81098 | + | 933 | WP_000991831.1 | hypothetical protein | - |
| AX202_RS26015 () | 81391..81576 | + | 186 | WP_001586223.1 | hypothetical protein | - |
| AX202_RS26020 () | 81577..82479 | + | 903 | WP_024187432.1 | hypothetical protein | - |
| AX202_RS26025 () | 82481..83350 | + | 870 | WP_001586225.1 | hypothetical protein | - |
| AX202_RS26030 () | 83407..84972 | - | 1566 | WP_001586226.1 | ATP-binding protein | - |
| AX202_RS26035 () | 85259..85771 | + | 513 | WP_001586228.1 | hypothetical protein | - |
| AX202_RS26040 () | 85805..86938 | - | 1134 | WP_000545985.1 | DUF3800 domain-containing protein | - |
| AX202_RS30335 () | 87105..87877 | - | 773 | Protein_99 | hypothetical protein | - |
| AX202_RS26055 () | 87906..88391 | - | 486 | WP_001403958.1 | hypothetical protein | - |
| AX202_RS26060 () | 88782..91403 | + | 2622 | WP_001586230.1 | hypothetical protein | - |
| AX202_RS26065 () | 91602..91832 | + | 231 | WP_001261274.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AX202_RS26070 () | 91921..92196 | + | 276 | WP_001403920.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AX202_RS30255 () | 92201..92418 | - | 218 | Protein_104 | transposase | - |
| AX202_RS26075 () | 92419..92949 | - | 531 | WP_000348883.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AX202_RS26080 () | 92953..93222 | - | 270 | WP_001275013.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AX202_RS26085 () | 94110..95099 | + | 990 | WP_123002471.1 | RepB family plasmid replication initiator protein | - |
| AX202_RS26090 () | 95422..96162 | - | 741 | WP_001586233.1 | tyrosine-type recombinase/integrase | - |
| AX202_RS30260 () | 96283..96465 | - | 183 | WP_042004909.1 | hypothetical protein | - |
| AX202_RS26100 () | 96532..96693 | - | 162 | WP_001440647.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AX202_RS26105 () | 96809..97077 | - | 269 | Protein_111 | type II toxin-antitoxin system ParD family antitoxin | - |
| AX202_RS26110 () | 97373..98112 | - | 740 | Protein_112 | IS91 family transposase ISMno23 | Transposase |
| AX202_RS26115 () | 98152..98849 | - | 698 | Protein_113 | IS1 family transposase | - |
| AX202_RS26125 () | 99065..99514 | - | 450 | WP_029702172.1 | hypothetical protein | - |
| AX202_RS29620 () | 100041..100564 | + | 524 | Protein_115 | IS1 family transposase | - |
| AX202_RS26140 () | 100656..100937 | - | 282 | Protein_116 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AX202_RS26150 () | 101193..102525 | - | 1333 | Protein_117 | group II intron reverse transcriptase/maturase | - |
| AX202_RS26160 () | 103142..104002 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| AX202_RS26165 () | 104185..104742 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| AX202_RS26170 () | 104906..107359 | + | 2454 | Protein_120 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AX202_RS26175 () | 107424..108128 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AX202_RS26180 () | 108182..109230 | - | 1049 | Protein_122 | IS3 family transposase ISKpn11 | Transposase |
| AX202_RS26190 () | 109322..109864 | - | 543 | WP_002063889.1 | AAA family ATPase | - |
| AX202_RS26195 () | 109877..110737 | - | 861 | WP_000557452.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| AX202_RS26200 () | 110844..111548 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AX202_RS26205 () | 111670..112575 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| AX202_RS26210 () | 112572..113810 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| AX202_RS26215 () | 113810..114394 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| AX202_RS26225 () | 114887..115651 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| AX202_RS30460 () | 115769..115834 | - | 66 | Protein_130 | EAL domain-containing protein | - |
| AX202_RS26230 () | 115878..116183 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| AX202_RS26235 () | 116194..117399 | - | 1206 | WP_061856961.1 | chromate efflux transporter | - |
| AX202_RS26240 () | 117555..117758 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| AX202_RS26245 () | 117886..118725 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| AX202_RS26250 () | 118719..119066 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| AX202_RS26255 () | 119279..119515 | - | 237 | WP_024167031.1 | Dihydrofolate reductase type 2 | ARG |
| AX202_RS30645 () | 119719..120018 | + | 300 | Protein_137 | 60 kDa chaperonin | VF |
| AX202_RS30650 () | 120019..120372 | + | 354 | Protein_138 | 60 kDa chaperonin | VF |
| AX202_RS26265 () | 120599..122131 | + | 1533 | WP_001747814.1 | IS91 family transposase | - |
| AX202_RS26270 () | 122388..122756 | + | 369 | WP_001470701.1 | mechanosensitive ion channel | - |
| AX202_RS26275 () | 122784..124319 | - | 1536 | WP_064768701.1 | hypothetical protein | ARG |
| AX202_RS26280 () | 124713..125393 | + | 681 | Protein_142 | IS91 family transposase ISAzo26 | Transposase |
| AX202_RS26285 () | 125458..126162 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AX202_RS26290 () | 126228..126773 | + | 546 | Protein_144 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AX202_RS28865 () | 126809..127224 | - | 416 | Protein_145 | IS1 family transposase | - |
| AX202_RS26300 () | 127473..127874 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| AX202_RS30285 () | 127807..128064 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| AX202_RS26310 () | 128157..128810 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|