MGE detailed information
MGE type: Prophage MGE length: 21675 bp
Accession: NZ_CP014225 Location: 4250924..4272598 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_CP014225 Location: 4250924..4272598 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AW869_RS26215 () | 4246913..4246960 | + | 48 | WP_211180494.1 | protein YnaN | - |
| AW869_RS21030 () | 4246974..4247957 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| AW869_RS21040 () | 4248435..4249808 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| AW869_RS21045 () | 4249937..4250872 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| AW869_RS24720 () | 4250924..4252159 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| AW869_RS21055 () | 4252161..4252376 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| AW869_RS21060 () | 4252455..4252664 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 4252480..4252658 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4252480..4252658 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4252480..4252658 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4252480..4252658 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| AW869_RS21065 () | 4252657..4252851 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| AW869_RS21070 () | 4252908..4253717 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| AW869_RS21075 () | 4253710..4256310 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| AW869_RS21080 () | 4256412..4256687 | - | 276 | WP_000632297.1 | protein RacC | - |
| AW869_RS21085 () | 4256762..4256932 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| AW869_RS21090 () | 4256932..4257153 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| AW869_RS21095 () | 4257595..4258083 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| AW869_RS21100 () | 4258080..4258235 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| AW869_RS21105 () | 4258689..4259165 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| AW869_RS21110 () | 4259289..4259585 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| AW869_RS21115 () | 4259608..4260030 | + | 423 | WP_000693797.1 | phage protein | - |
| AW869_RS21120 () | 4260043..4260900 | + | 858 | WP_000899748.1 | DUF1376 domain-containing protein | - |
| AW869_RS21125 () | 4260907..4261653 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| AW869_RS21130 () | 4261676..4262128 | + | 453 | Protein_4002 | DUF1627 domain-containing protein | - |
| AW869_RS25390 () | 4262324..4262509 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| AW869_RS21140 () | 4262706..4264163 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| AW869_RS21145 () | 4264301..4264564 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| AW869_RS21150 () | 4264545..4264904 | + | 360 | WP_000091628.1 | hypothetical protein | - |
| AW869_RS21160 () | 4265378..4266310 | + | 933 | Protein_4007 | phage tail length tape measure family protein | - |
| AW869_RS21165 () | 4266313..4266528 | + | 216 | Protein_4008 | Ail/Lom family outer membrane beta-barrel protein | - |
| AW869_RS21170 () | 4266670..4267650 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| AW869_RS25395 () | 4267720..4267908 | + | 189 | Protein_4010 | Ail/Lom family outer membrane beta-barrel protein | - |
| AW869_RS24745 () | 4267973..4271335 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| AW869_RS21195 () | 4271335..4271910 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| AW869_RS21200 () | 4272008..4272598 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| AW869_RS21205 () | 4272915..4273148 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| AW869_RS25840 () | 4273217..4273330 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| AW869_RS21210 () | 4274109..4274543 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| AW869_RS21215 () | 4274684..4275817 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20061 | HG738867 | 1300529..1322203 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA6362 | NC_000913 | 1412000..1433674 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21432 | NC_007779 | 1413714..1435388 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22680 | NC_010473 | 1499420..1521094 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23848 | NC_012759 | 1302083..1323757 | 0 | |
| Escherichia coli DH1 | Prophage | TA27398 | NC_017638 | 1394182..1415856 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48677 | NZ_CP009273 | 1406257..1427931 | 0 | |
| Escherichia coli strain DH5alpha | Prophage | TA90473 | NZ_CP025520 | 269442..291116 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285012 | NZ_HG738867 | 1300529..1322203 | 0 |