MGE detailed information
MGE type: Genomic_island MGE length: 18673 bp
Accession: NZ_CP013952 Location: 1005049..1023721 Organism: Escherichia coli strain HST04 Replicon: chromosome
Accession: NZ_CP013952 Location: 1005049..1023721 Organism: Escherichia coli strain HST04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWH44_RS05330 () | 1000098..1000907 | - | 810 | WP_000160710.1 | 2-keto-4-pentenoate hydratase | - |
| AWH44_RS05335 () | 1000917..1001648 | - | 732 | Protein_961 | 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase | - |
| AWH44_RS24160 () | 1001640..1001771 | - | 132 | Protein_962 | xanthine phosphoribosyltransferase | - |
| AWH44_RS05340 () | 1002032..1003489 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| AWH44_RS05345 () | 1003546..1004067 | - | 522 | Protein_964 | peptide chain release factor H | - |
| AWH44_RS05350 () | 1004063..1004269 | - | 207 | Protein_965 | RtcB family protein | - |
| AWH44_RS05360 () | 1004587..1005039 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| AWH44_RS05365 () | 1005049..1005447 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| AWH44_RS05370 () | 1005450..1005743 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| AWH44_RS05375 () | 1005795..1006850 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| AWH44_RS05380 () | 1006921..1007706 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| AWH44_RS05385 () | 1007678..1009390 | + | 1713 | Protein_971 | Lipid-A-disaccharide synthase | VF |
| AWH44_RS05390 () | 1009614..1010111 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| AWH44_RS05395 () | 1010287..1011036 | - | 750 | WP_000056849.1 | Ribonuclease E | VF |
| AWH44_RS05400 () | 1011246..1011506 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| AWH44_RS05405 () | 1011509..1011787 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| AWH44_RS05410 () | 1011943..1012683 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| AWH44_RS05415 () | 1012654..1013421 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| AWH44_RS05420 () | 1013627..1014205 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| AWH44_RS05425 () | 1014445..1016889 | + | 2445 | WP_000973083.1 | Sporulation initiation inhibitor protein Soj | VF |
| AWH44_RS05430 () | 1016932..1017378 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| AWH44_RS05435 () | 1017559..1018329 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| AWH44_RS23710 () | 1018370..1018648 | - | 279 | Protein_982 | ISAs1 family transposase | - |
| AWH44_RS05445 () | 1018646..1019002 | + | 357 | Protein_983 | hypothetical protein | - |
| AWH44_RS05450 () | 1019012..1019491 | + | 480 | WP_001236645.1 | hypothetical protein | - |
| AWH44_RS05455 () | 1019628..1020413 | - | 786 | WP_001086141.1 | lipoprotein | - |
| AWH44_RS05465 () | 1020950..1021681 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| AWH44_RS05470 () | 1021746..1022213 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| AWH44_RS05475 () | 1022210..1022932 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| AWH44_RS05480 () | 1022966..1023721 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| AWH44_RS05485 () | 1023793..1025151 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| AWH44_RS05490 () | 1025199..1025795 | - | 597 | Protein_991 | methyltransferase domain-containing protein | - |
| AWH44_RS05495 () | 1025826..1026626 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| AWH44_RS05500 () | 1026867..1027781 | + | 915 | WP_000648572.1 | LysR family transcriptional regulator | - |
| AWH44_RS05505 () | 1027778..1028581 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA28996, TA28997 | NC_020518 | 223678..243064 | 0.003 |