MGE detailed information
MGE type: Conjugative plasmid MGE length: 143748 bp
Accession: NZ_CP013657 Location: 1..143748 Organism: Escherichia coli strain uk_P46212 Replicon: plasmid unnamed
Accession: NZ_CP013657 Location: 1..143748 Organism: Escherichia coli strain uk_P46212 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AUO99_RS00010 () | 855..1160 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| AUO99_RS29625 () | 1204..1269 | + | 66 | Protein_2 | EAL domain-containing protein | - |
| AUO99_RS00015 () | 1387..2151 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| AUO99_RS00025 () | 2644..3228 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| AUO99_RS00030 () | 3228..4466 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| AUO99_RS00035 () | 4463..5368 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| AUO99_RS00040 () | 5490..6194 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AUO99_RS00045 () | 6420..7235 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| AUO99_RS00050 () | 7582..9468 | + | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| AUO99_RS00055 () | 9509..10036 | + | 528 | WP_000178050.1 | iron transporter | - |
| AUO99_RS00060 () | 10140..11519 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| AUO99_RS00065 () | 11522..12805 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| AUO99_RS00070 () | 12795..13925 | + | 1131 | WP_000729220.1 | ABC transporter permease | - |
| AUO99_RS00075 () | 13930..14625 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| AUO99_RS00080 () | 14612..15097 | + | 486 | WP_001267177.1 | TlpA family protein disulfide reductase | - |
| AUO99_RS00085 () | 15122..15607 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| AUO99_RS00090 () | 15729..16259 | + | 531 | Protein_17 | histidine-type phosphatase | - |
| AUO99_RS00095 () | 16317..17021 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AUO99_RS26400 () | 17046..18242 | + | 1197 | Protein_19 | IS3 family transposase | - |
| AUO99_RS00115 () | 18264..18497 | + | 234 | Protein_20 | Tn3 family transposase ISPsy39 | Transposase |
| AUO99_RS00120 () | 18574..18882 | + | 309 | Protein_21 | IS4 family transposase ISEc13 | Transposase |
| AUO99_RS00125 () | 18941..20251 | - | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| AUO99_RS00130 () | 20244..21317 | - | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| AUO99_RS00135 () | 21323..22147 | - | 825 | WP_000922702.1 | phosphodiesterase | - |
| AUO99_RS00140 () | 22158..23045 | - | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| AUO99_RS00145 () | 23035..23913 | - | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| AUO99_RS00150 () | 24044..24484 | - | 441 | Protein_27 | zinc-binding dehydrogenase | - |
| AUO99_RS00155 () | 24458..24652 | + | 195 | WP_000796505.1 | hypothetical protein | - |
| AUO99_RS00160 () | 24885..25775 | + | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| AUO99_RS00165 () | 25800..26180 | + | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| AUO99_RS00170 () | 26213..27178 | + | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| AUO99_RS00175 () | 27224..27976 | - | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| AUO99_RS00180 () | 28581..28865 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| AUO99_RS00185 () | 28865..29140 | + | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AUO99_RS00190 () | 29246..29539 | + | 294 | WP_001105060.1 | hypothetical protein | - |
| AUO99_RS28990 () | 29574..29702 | - | 129 | Protein_36 | IS481 family transposase | - |
| AUO99_RS00195 () | 29735..30903 | - | 1169 | Protein_37 | hypothetical protein | - |
| AUO99_RS00200 () | 31396..31703 | + | 308 | Protein_38 | type II toxin-antitoxin system ParD family antitoxin | - |
| AUO99_RS00210 () | 31992..32689 | + | 698 | Protein_39 | IS1 family transposase IS1S | Transposase |
| AUO99_RS00215 () | 32943..33965 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| AUO99_RS00220 () | 33950..35515 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| AUO99_RS00225 () | 35590..36006 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AUO99_RS00230 () | 36003..36233 | - | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AUO99_RS00235 () | 36614..40408 | + | 3795 | WP_001144732.1 | hypothetical protein | - |
| AUO99_RS00240 () | 40453..40869 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AUO99_RS00245 () | 40866..41096 | - | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AUO99_RS00250 () | 41361..41861 | + | 501 | WP_000528932.1 | hypothetical protein | - |
| AUO99_RS00255 () | 41874..42647 | + | 774 | WP_000905949.1 | hypothetical protein | - |
| AUO99_RS00260 () | 42858..44471 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| AUO99_RS00265 () | 44502..44852 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| AUO99_RS00270 () | 44849..45274 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| AUO99_RS00275 () | 45336..46487 | + | 1152 | WP_031325939.1 | DUF3800 domain-containing protein | - |
| AUO99_RS00280 () | 46521..47033 | - | 513 | WP_000151784.1 | hypothetical protein | - |
| AUO99_RS00285 () | 47579..47797 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AUO99_RS00290 () | 47799..48104 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AUO99_RS00295 () | 48105..48911 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| AUO99_RS00300 () | 49685..50440 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| AUO99_RS00305 () | 51028..52194 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| AUO99_RS00310 () | 52194..53165 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AUO99_RS00315 () | 54032..54934 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| AUO99_RS28365 () | 54938..55242 | + | 305 | Protein_61 | hypothetical protein | - |
| AUO99_RS00325 () | 55319..56002 | + | 684 | WP_000086185.1 | DNA methylase | - |
| AUO99_RS00330 () | 56003..56224 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| AUO99_RS00335 () | 56238..56672 | + | 435 | WP_000274437.1 | DUF1380 family protein | - |
| AUO99_RS28995 () | 56723..57499 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| AUO99_RS00345 () | 58039..58341 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| AUO99_RS00350 () | 58388..58810 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| AUO99_RS00355 () | 58807..58998 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| AUO99_RS00360 () | 60033..60263 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| AUO99_RS00365 () | 60315..61676 | + | 1362 | WP_000170728.1 | DUF3560 domain-containing protein | - |
| AUO99_RS00370 () | 61722..62285 | + | 564 | WP_012783964.1 | class I SAM-dependent methyltransferase | - |
| AUO99_RS00390 () | 63801..65702 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| AUO99_RS00395 () | 65852..66337 | + | 486 | WP_042029316.1 | single-stranded DNA-binding protein | - |
| AUO99_RS00400 () | 66393..66626 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| AUO99_RS00405 () | 66685..68643 | + | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| AUO99_RS00410 () | 68698..69132 | + | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| AUO99_RS00415 () | 69129..69848 | + | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| AUO99_RS29570 () | 69860..70048 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 69860..70084 | + | 225 | NuclAT_0 | - | - |
| - () | 69860..70084 | + | 225 | NuclAT_0 | - | - |
| - () | 69860..70084 | + | 225 | NuclAT_0 | - | - |
| - () | 69860..70084 | + | 225 | NuclAT_0 | - | - |
| - () | 70017..70082 | + | 66 | - | - | Antitoxin Detail |
| AUO99_RS00425 () | 70128..70286 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| AUO99_RS00435 () | 71205..71492 | + | 288 | WP_000107537.1 | hypothetical protein | - |
| AUO99_RS00440 () | 71612..72433 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| AUO99_RS00445 () | 72730..73377 | - | 648 | WP_000614282.1 | hypothetical protein | VF |
| AUO99_RS00450 () | 73663..74046 | + | 384 | WP_001151564.1 | relaxosome protein TraM | - |
| AUO99_RS00455 () | 74240..74926 | + | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| AUO99_RS00460 () | 75020..75247 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| AUO99_RS00465 () | 75281..75643 | + | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| AUO99_RS00470 () | 75648..75959 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| AUO99_RS00475 () | 75981..76547 | + | 567 | WP_000399804.1 | type IV conjugative transfer system protein TraE | - |
| AUO99_RS00480 () | 76558..77262 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| AUO99_RS00485 () | 77262..78689 | + | 1428 | WP_060667420.1 | conjugal transfer protein TraB | - |
| AUO99_RS00490 () | 78679..79263 | + | 585 | WP_000002795.1 | conjugal transfer protein TraP | - |
| AUO99_RS00495 () | 79217..79570 | + | 354 | WP_071528018.1 | conjugal transfer protein TrbD | - |
| AUO99_RS00500 () | 79563..79814 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| AUO99_RS00505 () | 79811..80326 | + | 516 | WP_000809893.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AUO99_RS26475 () | 80461..80682 | + | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| AUO99_RS00510 () | 80842..83472 | + | 2631 | WP_012783967.1 | type IV secretion system protein TraC | - |
| AUO99_RS00515 () | 83519..84223 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AUO99_RS00525 () | 84467..85729 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| AUO99_RS29015 () | 85935..86129 | - | 195 | Protein_99 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AUO99_RS00535 () | 86293..86850 | + | 558 | WP_060667421.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| AUO99_RS00540 () | 87033..87893 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| AUO99_RS00545 () | 88040..90511 | - | 2472 | Protein_102 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| AUO99_RS29020 () | 90514..90600 | - | 87 | Protein_103 | helix-turn-helix domain-containing protein | - |
| AUO99_RS00550 () | 90654..91358 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| AUO99_RS00555 () | 91474..91779 | + | 306 | WP_000224416.1 | hypothetical protein | - |
| AUO99_RS00560 () | 91788..92426 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AUO99_RS00565 () | 92423..94273 | + | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AUO99_RS00570 () | 94300..94557 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| AUO99_RS00575 () | 94550..95293 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AUO99_RS00580 () | 95307..95651 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| AUO99_RS00585 () | 95770..96054 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AUO99_RS00590 () | 96041..96586 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AUO99_RS00595 () | 96516..96863 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| AUO99_RS00600 () | 96811..97236 | + | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| AUO99_RS00605 () | 97223..98596 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| AUO99_RS00610 () | 98593..101415 | + | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AUO99_RS00615 () | 101431..101916 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| AUO99_RS00620 () | 101965..102696 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| AUO99_RS00625 () | 102899..103636 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| AUO99_RS00630 () | 103687..105885 | + | 2199 | WP_000009332.1 | type IV conjugative transfer system coupling protein TraD | - |
| AUO99_RS00635 () | 105885..111155 | + | 5271 | WP_000948354.1 | Multifunctional conjugation protein TraI | Relaxase |
| AUO99_RS00640 () | 111175..111921 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| AUO99_RS00645 () | 111980..112840 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| AUO99_RS00650 () | 112943..113503 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| AUO99_RS00655 () | 113632..113844 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| AUO99_RS00665 () | 114124..114821 | + | 698 | Protein_126 | IS1 family transposase IS1R | Transposase |
| AUO99_RS00670 () | 114866..115327 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| AUO99_RS00675 () | 115373..115582 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| AUO99_RS00680 () | 115620..116210 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| AUO99_RS00685 () | 116450..116704 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| AUO99_RS00690 () | 116942..117016 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AUO99_RS00695 () | 117009..117866 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| AUO99_RS00700 () | 118805..119458 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| AUO99_RS29025 () | 119551..119808 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| AUO99_RS00710 () | 119741..120142 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| AUO99_RS00715 () | 120279..123176 | - | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| AUO99_RS00720 () | 123271..123876 | + | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| AUO99_RS00725 () | 123900..124649 | - | 750 | Protein_138 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AUO99_RS00730 () | 124638..125045 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| AUO99_RS00735 () | 125183..126067 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| AUO99_RS00740 () | 126099..127298 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| AUO99_RS00745 () | 127404..128054 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| AUO99_RS00750 () | 128086..128328 | - | 243 | WP_032140899.1 | hypothetical protein | - |
| AUO99_RS00755 () | 128370..129884 | - | 1515 | Protein_144 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AUO99_RS00760 () | 129950..130654 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AUO99_RS00765 () | 130798..131352 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| AUO99_RS00770 () | 131483..132313 | + | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| AUO99_RS00775 () | 132451..132891 | + | 441 | Protein_148 | CatB-related O-acetyltransferase | - |
| AUO99_RS00780 () | 132945..133649 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AUO99_RS00785 () | 133713..135944 | - | 2232 | Protein_150 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AUO99_RS00790 () | 135958..136290 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| AUO99_RS00795 () | 136337..137212 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| AUO99_RS00800 () | 137348..138052 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AUO99_RS29690 () | 138093..138272 | - | 180 | Protein_154 | recombinase family protein | - |
| AUO99_RS29030 () | 138398..138748 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| AUO99_RS00815 () | 138951..139964 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| AUO99_RS00820 () | 140122..140595 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| AUO99_RS00825 () | 140726..141514 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| AUO99_RS00830 () | 141720..142067 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| AUO99_RS00835 () | 142061..142900 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| AUO99_RS00840 () | 143028..143231 | + | 204 | WP_000376616.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|