MGE detailed information
MGE type: Conjugative plasmid MGE length: 120611 bp
Accession: NZ_CP013024 Location: 1..120611 Organism: Escherichia coli strain 2009C-3133 Replicon: plasmid unnamed1
Accession: NZ_CP013024 Location: 1..120611 Organism: Escherichia coli strain 2009C-3133 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MJ49_RS27960 () | 1054..1599 | + | 546 | WP_001369268.1 | hypothetical protein | - |
| MJ49_RS00015 () | 1572..1952 | - | 381 | WP_000690882.1 | hypothetical protein | - |
| MJ49_RS32495 () | 1952..2311 | - | 360 | WP_000379509.1 | hypothetical protein | - |
| MJ49_RS00025 () | 2370..3188 | - | 819 | WP_072148514.1 | conjugal transfer protein TraT | - |
| MJ49_RS00030 () | 3103..3354 | - | 252 | WP_001277575.1 | hypothetical protein | - |
| MJ49_RS00035 () | 3411..3809 | - | 399 | WP_000086067.1 | hypothetical protein | - |
| MJ49_RS00040 () | 3856..4383 | - | 528 | WP_001379391.1 | conjugal transfer protein TraQ | - |
| MJ49_RS00045 () | 4383..5096 | - | 714 | WP_000787006.1 | conjugal transfer protein TraP | - |
| MJ49_RS00050 () | 5093..6424 | - | 1332 | WP_009453278.1 | conjugal transfer protein TraO | - |
| MJ49_RS00055 () | 6428..7402 | - | 975 | WP_001165565.1 | hypothetical protein | VF |
| MJ49_RS00060 () | 7413..8108 | - | 696 | WP_001287261.1 | DotI/IcmL family type IV secretion protein | - |
| MJ49_RS00065 () | 8120..8470 | - | 351 | WP_001056365.1 | hypothetical protein | - |
| MJ49_RS00070 () | 8487..12503 | - | 4017 | WP_021554958.1 | hypothetical protein | - |
| MJ49_RS00075 () | 12567..12857 | - | 291 | WP_000817799.1 | hypothetical protein | - |
| MJ49_RS00080 () | 12854..14002 | - | 1149 | WP_000625246.1 | putative protein YggR | VF |
| MJ49_RS00085 () | 13986..14822 | - | 837 | WP_000848138.1 | hypothetical protein | VF |
| MJ49_RS00090 () | 14819..15271 | - | 453 | WP_001081198.1 | DotD/TraH family lipoprotein | - |
| MJ49_RS32655 () | 15320..15490 | - | 171 | WP_000482367.1 | hypothetical protein | - |
| MJ49_RS00095 () | 15630..16832 | - | 1203 | WP_000980151.1 | conjugal transfer protein TraF | - |
| MJ49_RS00100 () | 16922..17743 | - | 822 | WP_000804090.1 | hypothetical protein | - |
| MJ49_RS00105 () | 18003..18323 | + | 321 | WP_000695052.1 | hypothetical protein | - |
| MJ49_RS00110 () | 18415..18705 | - | 291 | WP_000681898.1 | hypothetical protein | - |
| MJ49_RS00115 () | 18747..19916 | - | 1170 | WP_000486835.1 | site-specific integrase | - |
| MJ49_RS00125 () | 20531..21895 | - | 1365 | WP_001168072.1 | hypothetical protein | VF |
| MJ49_RS00130 () | 21900..22535 | - | 636 | WP_000478596.1 | prepilin peptidase | - |
| MJ49_RS00135 () | 22554..23027 | - | 474 | WP_000870986.1 | hypothetical protein | VF |
| MJ49_RS00140 () | 23081..23617 | - | 537 | WP_001011156.1 | cleavage protein | - |
| MJ49_RS00145 () | 23691..24791 | - | 1101 | WP_000670135.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| MJ49_RS00150 () | 24793..26301 | - | 1509 | WP_060564965.1 | Type II secretion system protein E | VF |
| MJ49_RS00155 () | 26386..26838 | - | 453 | WP_001112926.1 | type IV pilus biogenesis protein PilP | - |
| MJ49_RS00160 () | 26828..28123 | - | 1296 | WP_000129889.1 | type 4b pilus protein PilO2 | - |
| MJ49_RS00165 () | 28144..29763 | - | 1620 | WP_001034998.1 | Outer membrane lipoprotein BfpB | VF |
| MJ49_RS00170 () | 29794..30231 | - | 438 | WP_000539685.1 | type IV pilus biogenesis protein PilM | - |
| MJ49_RS00175 () | 30236..31306 | - | 1071 | WP_001170192.1 | hypothetical protein | VF |
| MJ49_RS00180 () | 31463..31798 | - | 336 | WP_024174020.1 | hypothetical protein | - |
| MJ49_RS27970 () | 31915..32232 | - | 318 | WP_001330559.1 | PilI type IV pilus biogenesis protein | - |
| MJ49_RS00185 () | 32238..33932 | - | 1695 | WP_000482663.1 | flotillin family protein | - |
| MJ49_RS00190 () | 33959..34579 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| MJ49_RS00195 () | 34846..35511 | - | 666 | WP_000154143.1 | hypothetical protein | - |
| MJ49_RS00200 () | 35652..36293 | - | 642 | WP_000335846.1 | transcription termination factor NusG | - |
| MJ49_RS00205 () | 36996..37868 | + | 873 | WP_000729440.1 | incFII family plasmid replication initiator RepA | - |
| MJ49_RS00215 () | 38817..39068 | + | 252 | WP_001139207.1 | plasmid stabilization protein | Antitoxin Detail |
| MJ49_RS00220 () | 39065..39352 | + | 288 | WP_000222775.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| MJ49_RS32660 () | 39362..39907 | + | 546 | WP_000926984.1 | hypothetical protein | - |
| MJ49_RS00235 () | 40559..41161 | - | 603 | WP_000517694.1 | hypothetical protein | - |
| MJ49_RS00240 () | 41515..41754 | + | 240 | Protein_46 | hypothetical protein | - |
| MJ49_RS00245 () | 41789..44467 | - | 2679 | Protein_47 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| MJ49_RS00250 () | 44510..45214 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| MJ49_RS00255 () | 45278..45616 | + | 339 | Protein_49 | Tn3 family transposase TnpR_Tn3 | Transposase |
| MJ49_RS00260 () | 45799..46659 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| MJ49_RS28000 () | 46806..47087 | + | 282 | Protein_51 | transposase zinc-binding domain-containing protein | - |
| MJ49_RS00265 () | 47257..47961 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| MJ49_RS00270 () | 48011..48730 | + | 720 | Protein_53 | AAA family ATPase | - |
| MJ49_RS00275 () | 48717..49568 | + | 852 | WP_000240536.1 | replication protein | - |
| MJ49_RS00280 () | 49876..50691 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| MJ49_RS00285 () | 50752..51555 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| MJ49_RS00290 () | 51555..52322 | + | 768 | WP_009447875.1 | hypothetical protein | ARG |
| MJ49_RS00300 () | 52351..53048 | + | 698 | Protein_58 | IS1 family transposase IS1R | Transposase |
| MJ49_RS00305 () | 53217..54032 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| MJ49_RS00310 () | 54222..54926 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| MJ49_RS00315 () | 54991..56241 | - | 1251 | Protein_61 | transposase | - |
| MJ49_RS00320 () | 56316..56984 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| MJ49_RS00325 () | 57020..57256 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| MJ49_RS00330 () | 57253..57615 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| MJ49_RS00335 () | 57633..59327 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| MJ49_RS00340 () | 59379..59801 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| MJ49_RS00345 () | 59837..60112 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| MJ49_RS00350 () | 60126..60476 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| MJ49_RS00355 () | 60548..60982 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| MJ49_RS00375 () | 61985..62227 | + | 243 | WP_000844627.1 | transposase | - |
| MJ49_RS00380 () | 62259..62909 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| MJ49_RS00385 () | 63015..64214 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| MJ49_RS00390 () | 64246..65130 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| MJ49_RS00395 () | 65268..65675 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| MJ49_RS00400 () | 65664..67415 | + | 1752 | Protein_75 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| MJ49_RS00410 () | 67881..69155 | + | 1275 | WP_024174015.1 | hypothetical protein | - |
| MJ49_RS00415 () | 69173..69520 | - | 348 | WP_000762572.1 | colicin transporter | - |
| MJ49_RS00420 () | 69639..69986 | + | 348 | WP_000142445.1 | hypothetical protein | - |
| MJ49_RS32665 () | 70006..70167 | - | 162 | WP_000251881.1 | hypothetical protein | - |
| MJ49_RS32670 () | 70606..70908 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| MJ49_RS00440 () | 70905..71531 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| MJ49_RS00445 () | 71743..73014 | - | 1272 | WP_000457473.1 | Y-family DNA polymerase | - |
| MJ49_RS00450 () | 73014..73451 | - | 438 | WP_000109077.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| MJ49_RS00455 () | 73448..73696 | - | 249 | WP_000619113.1 | DinI-like family protein | - |
| MJ49_RS00460 () | 74114..75016 | + | 903 | WP_023842311.1 | DUF1281 domain-containing protein | - |
| MJ49_RS30460 () | 75013..75324 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| MJ49_RS00470 () | 75401..76084 | + | 684 | WP_000086152.1 | DNA methylase | - |
| MJ49_RS00475 () | 76085..76306 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| MJ49_RS00480 () | 76320..76754 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| MJ49_RS32675 () | 76800..77576 | + | 777 | WP_001005043.1 | hypothetical protein | - |
| MJ49_RS00495 () | 78117..78419 | + | 303 | WP_072106536.1 | antirestriction protein | - |
| MJ49_RS00500 () | 78466..78885 | + | 420 | WP_000271736.1 | DUF1380 family protein | - |
| MJ49_RS00505 () | 78885..79076 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| MJ49_RS30470 () | 79147..79461 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| MJ49_RS00515 () | 79845..80372 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| MJ49_RS00520 () | 80430..80663 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| MJ49_RS00525 () | 80722..82680 | + | 1959 | WP_001145479.1 | ParB/RepB/Spo0J family partition protein | - |
| MJ49_RS00530 () | 82735..83169 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| MJ49_RS00535 () | 83166..83885 | + | 720 | WP_001276263.1 | plasmid SOS inhibition protein A | - |
| MJ49_RS00540 () | 83882..84478 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| MJ49_RS00550 () | 84941..85441 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| MJ49_RS00560 () | 86172..86606 | + | 435 | WP_000218850.1 | hypothetical protein | - |
| MJ49_RS00565 () | 86699..86965 | + | 267 | WP_001247861.1 | hypothetical protein | - |
| MJ49_RS00570 () | 87156..87545 | + | 390 | WP_077870397.1 | hypothetical protein | - |
| MJ49_RS00575 () | 87542..88468 | + | 927 | WP_000038345.1 | Recombination-promoting nuclease RpnA | VF |
| MJ49_RS30475 () | 88468..88689 | + | 222 | WP_009453089.1 | hypothetical protein | - |
| MJ49_RS00580 () | 88720..88971 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| MJ49_RS00585 () | 89550..90398 | + | 849 | WP_001077046.1 | DUF4942 domain-containing protein | - |
| MJ49_RS00590 () | 90483..90818 | - | 336 | WP_000157096.1 | hypothetical protein | - |
| MJ49_RS00595 () | 91051..91383 | + | 333 | WP_001291058.1 | hypothetical protein | - |
| MJ49_RS00600 () | 91395..94106 | + | 2712 | WP_000991386.1 | Protein TraI | Relaxase |
| MJ49_RS00605 () | 94174..94605 | + | 432 | WP_001335086.1 | hypothetical protein | - |
| MJ49_RS28075 () | 94703..94933 | - | 231 | WP_032072127.1 | hypothetical protein | - |
| MJ49_RS00620 () | 95412..97715 | - | 2304 | WP_000077655.1 | TraM recognition domain-containing protein | - |
| MJ49_RS00625 () | 97696..98814 | - | 1119 | WP_000155608.1 | DsbC family protein | - |
| MJ49_RS00630 () | 98811..100100 | - | 1290 | WP_000121923.1 | IncI1-type conjugal transfer protein TrbA | - |
| MJ49_RS00635 () | 100837..101148 | - | 312 | WP_000203479.1 | hypothetical protein | - |
| MJ49_RS00640 () | 101176..101367 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| MJ49_RS00645 () | 101380..101742 | - | 363 | WP_000997721.1 | hypothetical protein | - |
| MJ49_RS28080 () | 101876..102085 | + | 210 | WP_050561356.1 | hypothetical protein | - |
| MJ49_RS00655 () | 102248..106339 | - | 4092 | WP_072004513.1 | Serine protease SepA autotransporter | VF |
| MJ49_RS00660 () | 106704..107207 | - | 504 | WP_000598957.1 | thermonuclease family protein | - |
| MJ49_RS00665 () | 107366..107989 | + | 624 | WP_001158020.1 | hypothetical protein | - |
| MJ49_RS00670 () | 108077..108532 | + | 456 | WP_001205146.1 | DUF2569 family protein | - |
| MJ49_RS00675 () | 108732..110267 | + | 1536 | WP_001317519.1 | phosphoethanolamine transferase | - |
| MJ49_RS00680 () | 110360..110602 | - | 243 | WP_000064387.1 | hypothetical protein | - |
| MJ49_RS00685 () | 110935..111087 | + | 153 | WP_001597021.1 | Hok/Gef family protein | - |
| MJ49_RS00690 () | 111225..112811 | - | 1587 | WP_000004565.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| MJ49_RS00695 () | 113085..113738 | - | 654 | WP_001098361.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| MJ49_RS00700 () | 113809..115974 | - | 2166 | WP_000691804.1 | DotA/TraY family protein | - |
| MJ49_RS00705 () | 116047..116616 | - | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| MJ49_RS00710 () | 116613..117818 | - | 1206 | WP_001189539.1 | conjugal transfer protein TraW | - |
| MJ49_RS00715 () | 117779..118396 | - | 618 | WP_000286861.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA6132 | NC_022992 | 1..115452 | 0.008 | |
| Escherichia coli | Conjugative plasmid | TA6131 | NC_022996 | 1..124908 | 0.006 |