MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 144188 bp
Accession: NZ_CP012138 Location: 1..144188 Organism: Shigella flexneri 2a strain 981 Replicon: plasmid 981p1
Accession: NZ_CP012138 Location: 1..144188 Organism: Shigella flexneri 2a strain 981 Replicon: plasmid 981p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AD867_RS24965 (AD867_25130) | 191..563 | - | 373 | Protein_0 | IS3 family transposase IS2 | Transposase |
| AD867_RS30505 | 807..926 | + | 120 | Protein_1 | Tn3 family transposase TnpA_ISNpu13 | Transposase |
| AD867_RS24970 (AD867_25140) | 1176..2042 | + | 867 | WP_001046939.1 | hypothetical protein | VF |
| AD867_RS24975 (AD867_25145) | 2371..3111 | + | 741 | WP_000850662.1 | PAP2 family phosphatase PhoN2 | - |
| AD867_RS31750 (AD867_25150) | 3184..3306 | + | 123 | WP_000537156.1 | IS3 family transposase IS629 | Transposase |
| AD867_RS30955 (AD867_25155) | 3464..4918 | - | 1455 | Protein_5 | hypothetical protein | VF |
| AD867_RS24990 (AD867_25160) | 5285..5803 | - | 519 | Protein_6 | IS66 family transposase IS679 | Transposase |
| AD867_RS24995 (AD867_25165) | 5820..6056 | - | 237 | Protein_7 | IS3 family transposase ISSfl11 | Transposase |
| AD867_RS29340 | 6107..7263 | - | 1157 | Protein_8 | IS3 family transposase IS600 | Transposase |
| AD867_RS25005 (AD867_25175) | 7435..9144 | - | 1710 | WP_005061014.1 | hypothetical protein | VF |
| AD867_RS25010 (AD867_25180) | 9576..10295 | - | 720 | WP_001121867.1 | Phosphothreonine lyase OspF | VF |
| AD867_RS25015 (AD867_25185) | 10420..10976 | - | 557 | Protein_11 | ISL3 family transposase ISKox3 | Transposase |
| AD867_RS29345 | 10960..11218 | + | 259 | Protein_12 | IS1 family transposase | - |
| AD867_RS25020 (AD867_25190) | 11327..11905 | - | 579 | WP_000868563.1 | hypothetical protein | - |
| AD867_RS31605 | 11954..12212 | - | 259 | Protein_14 | integrase core domain-containing protein | - |
| AD867_RS25030 (AD867_25200) | 12326..12563 | - | 238 | Protein_15 | ATP-binding protein | - |
| AD867_RS25035 (AD867_25210) | 12750..13179 | - | 430 | Protein_16 | IS91 family transposase IS91 | Transposase |
| AD867_RS25040 (AD867_25215) | 13227..13412 | - | 186 | WP_000338649.1 | hypothetical protein | - |
| AD867_RS25045 (AD867_25220) | 13575..13856 | + | 282 | Protein_18 | IS66 family transposase ISCro1 | Transposase |
| AD867_RS25050 (AD867_25225) | 13870..15216 | - | 1347 | WP_011587243.1 | IS4 family transposase IS4 | Transposase |
| AD867_RS25055 (AD867_25230) | 15286..15660 | + | 375 | Protein_20 | IS66 family transposase ISCro1 | Transposase |
| AD867_RS25060 (AD867_25235) | 15660..16007 | + | 348 | WP_000622998.1 | IS66 family transposase ISCro1 | Transposase |
| AD867_RS25065 (AD867_25240) | 16027..17256 | + | 1230 | Protein_22 | IS66 family transposase IS679 | Transposase |
| AD867_RS29360 | 17260..17419 | + | 160 | Protein_23 | IS3 family transposase | - |
| AD867_RS29365 | 18008..18306 | + | 299 | Protein_24 | transposase | - |
| AD867_RS30520 | 18388..18525 | + | 138 | Protein_25 | IS630 family transposase | - |
| AD867_RS25080 (AD867_25255) | 18897..19574 | + | 678 | WP_000026470.1 | hypothetical protein | VF |
| AD867_RS30960 | 19898..20008 | + | 111 | Protein_27 | IS3 family transposase | - |
| AD867_RS30965 | 20086..20400 | + | 315 | WP_011114726.1 | hypothetical protein | - |
| AD867_RS25090 (AD867_25265) | 20682..21248 | + | 567 | WP_000901798.1 | hypothetical protein | VF |
| AD867_RS31615 | 21510..21632 | - | 123 | Protein_30 | transposase domain-containing protein | - |
| AD867_RS25095 (AD867_25270) | 21775..22329 | + | 555 | Protein_31 | IS3 family transposase IS3H | Transposase |
| AD867_RS25100 (AD867_25275) | 22668..23029 | + | 362 | Protein_32 | IS1 family transposase IS1N | Transposase |
| AD867_RS25105 (AD867_25280) | 23116..23793 | + | 678 | Protein_33 | IS21 family transposase IS100kyp | Transposase |
| AD867_RS25110 (AD867_25285) | 23819..25012 | - | 1194 | WP_005064872.1 | IS4 family transposase ISSfl1 | Transposase |
| AD867_RS25115 (AD867_25290) | 25092..25448 | + | 357 | Protein_35 | IS21 family transposase IS100kyp | Transposase |
| AD867_RS25120 (AD867_25295) | 25445..26227 | + | 783 | WP_011114728.1 | IS21 family transposase IS100kyp | Transposase |
| AD867_RS25125 (AD867_25300) | 26294..26632 | + | 339 | Protein_37 | IS1 family transposase | - |
| AD867_RS31620 | 26646..26780 | + | 135 | Protein_38 | hypothetical protein | - |
| AD867_RS25130 (AD867_25305) | 26954..28153 | + | 1200 | WP_000200287.1 | AAA family ATPase | - |
| AD867_RS25135 (AD867_25310) | 28153..29133 | + | 981 | WP_000431558.1 | ParB family protein | - |
| AD867_RS25140 (AD867_25315) | 29389..29874 | + | 486 | WP_000003223.1 | IS110 family transposase ISSde4 | Transposase |
| AD867_RS25145 (AD867_25320) | 29901..30080 | - | 180 | Protein_42 | transposase domain-containing protein | - |
| AD867_RS25150 (AD867_25325) | 30163..31290 | - | 1128 | WP_014526552.1 | group II intron reverse transcriptase/maturase | - |
| AD867_RS31625 | 31212..31550 | + | 339 | WP_227804374.1 | hypothetical protein | - |
| AD867_RS25155 (AD867_25330) | 31866..32045 | - | 180 | Protein_45 | transposase | - |
| AD867_RS25165 | 32082..33291 | - | 1210 | Protein_46 | IS3 family transposase | - |
| AD867_RS25175 (AD867_25355) | 33348..33644 | - | 297 | Protein_47 | DDE-type integrase/transposase/recombinase | - |
| AD867_RS25180 (AD867_25360) | 33760..33948 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| AD867_RS25185 (AD867_25365) | 33958..35157 | + | 1200 | WP_061460711.1 | IS91 family transposase ISSbo1 | Transposase |
| AD867_RS25195 (AD867_25375) | 35330..36084 | - | 755 | Protein_50 | IS3 family transposase IS150 | Transposase |
| AD867_RS25200 (AD867_25380) | 36095..36454 | + | 360 | Protein_51 | IS21 family transposase IS100 | Transposase |
| AD867_RS25205 (AD867_25385) | 36447..37235 | - | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| AD867_RS25210 (AD867_25390) | 37664..38065 | + | 402 | Protein_53 | IS3 family transposase ISEc48 | Transposase |
| AD867_RS25215 (AD867_25395) | 38247..38513 | + | 267 | WP_000957712.1 | hypothetical protein | VF |
| AD867_RS25220 (AD867_25400) | 38703..39400 | + | 698 | WP_227804301.1 | IS1 family transposase IS1X2 | Transposase |
| AD867_RS25225 (AD867_25405) | 39661..40857 | - | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| AD867_RS25230 (AD867_25410) | 41193..42884 | + | 1692 | WP_000597733.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| AD867_RS29400 | 42936..44144 | + | 1209 | Protein_58 | IS3 family transposase | - |
| AD867_RS29405 | 44187..44710 | - | 524 | Protein_59 | IS3 family transposase ISSfl11 | Transposase |
| AD867_RS25255 (AD867_25435) | 44778..45260 | - | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AD867_RS25260 (AD867_25440) | 45251..45553 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AD867_RS25265 (AD867_25445) | 45825..46097 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| AD867_RS25270 (AD867_25450) | 46078..47286 | + | 1209 | WP_000198552.1 | IS91 family transposase ISSbo1 | Transposase |
| AD867_RS30970 | 47458..47586 | + | 129 | Protein_64 | IS5 family transposase ISSfl7 | Transposase |
| AD867_RS25275 (AD867_25455) | 47735..49189 | - | 1455 | WP_000701108.1 | hypothetical protein | VF |
| AD867_RS25280 (AD867_25460) | 49593..50212 | + | 620 | Protein_66 | IS1 family transposase IS1X2 | Transposase |
| AD867_RS29420 | 50262..51471 | + | 1210 | Protein_67 | IS3 family transposase | - |
| AD867_RS29425 | 51515..51925 | + | 411 | Protein_68 | IS66 family transposase ISEc47 | Transposase |
| AD867_RS25305 (AD867_25485) | 51957..52571 | + | 615 | Protein_69 | IS21 family transposase ISEc10 | Transposase |
| AD867_RS25310 (AD867_25490) | 52740..56834 | - | 4095 | WP_001034121.1 | Serine protease SepA autotransporter | VF |
| AD867_RS25320 (AD867_25500) | 57236..57424 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| AD867_RS25325 (AD867_25505) | 57434..58632 | + | 1199 | WP_094081567.1 | IS91 family transposase | - |
| AD867_RS29430 | 58801..59307 | - | 507 | Protein_73 | IS3 family transposase | - |
| AD867_RS25345 (AD867_25525) | 59370..59774 | - | 405 | WP_011114759.1 | hypothetical protein | - |
| AD867_RS31630 | 59964..60092 | - | 129 | Protein_75 | IS630 family transposase | - |
| AD867_RS30975 (AD867_25530) | 60326..61042 | - | 717 | WP_011114760.1 | hypothetical protein | - |
| AD867_RS29445 | 61626..62026 | - | 401 | Protein_77 | transposase | - |
| AD867_RS25360 (AD867_25540) | 62059..62513 | - | 455 | Protein_78 | ISL3 family transposase ISKox3 | Transposase |
| AD867_RS29450 | 62566..63776 | + | 1211 | Protein_79 | IS3 family transposase | - |
| AD867_RS25380 (AD867_25560) | 63809..63958 | - | 150 | Protein_80 | ISL3 family transposase ISEc53 | Transposase |
| AD867_RS25385 (AD867_25565) | 64133..64562 | - | 430 | Protein_81 | IS91 family transposase IS91 | Transposase |
| AD867_RS25390 (AD867_25570) | 64610..64975 | - | 366 | WP_000124083.1 | hypothetical protein | - |
| AD867_RS31065 | 65728..66126 | - | 399 | Protein_83 | reverse transcriptase/maturase family protein | - |
| AD867_RS29465 | 66129..66495 | - | 367 | Protein_84 | IS3 family transposase IS629 | Transposase |
| AD867_RS29470 | 66497..67184 | - | 688 | Protein_85 | IS3 family transposase IS629 | Transposase |
| AD867_RS25415 (AD867_25595) | 67363..68565 | - | 1203 | WP_001195004.1 | Cysteine protease-like VirA | VF |
| AD867_RS25420 (AD867_25600) | 69094..72402 | + | 3309 | WP_001071795.1 | Outer membrane protein IcsA autotransporter | VF |
| AD867_RS29475 | 72546..72864 | + | 319 | Protein_88 | Outer membrane usher protein PapC | VF |
| AD867_RS29480 | 73037..74246 | + | 1210 | Protein_89 | IS3 family transposase IS629 | Transposase |
| AD867_RS25440 (AD867_25620) | 74587..76239 | + | 1653 | WP_000612525.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| AD867_RS29485 | 76250..76420 | - | 171 | Protein_91 | transposase | - |
| AD867_RS31635 | 76553..76672 | - | 120 | Protein_92 | transposase domain-containing protein | - |
| AD867_RS31070 | 76746..77745 | - | 1000 | Protein_93 | group II intron reverse transcriptase/maturase | - |
| AD867_RS25455 (AD867_25640) | 77959..78159 | - | 201 | Protein_94 | IS3 family transposase ISSfl10 | Transposase |
| AD867_RS25460 (AD867_25645) | 78537..79286 | + | 750 | WP_000828661.1 | phosphatase PAP2 family protein | - |
| AD867_RS31640 | 79341..79445 | - | 105 | Protein_96 | hypothetical protein | - |
| AD867_RS25475 (AD867_25660) | 80346..80726 | - | 381 | WP_005015412.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| AD867_RS25480 (AD867_25665) | 80909..81304 | - | 396 | WP_000445929.1 | plasmid partitioning/stability family protein | - |
| AD867_RS25485 (AD867_25670) | 81304..82263 | - | 960 | WP_000921952.1 | plasmid segregation protein ParM | - |
| AD867_RS25490 (AD867_25675) | 82703..83605 | + | 903 | WP_015683198.1 | DUF1281 domain-containing protein | - |
| AD867_RS25495 (AD867_25680) | 83602..83913 | + | 312 | WP_011114770.1 | hypothetical protein | - |
| AD867_RS25500 (AD867_25685) | 83977..84660 | + | 684 | WP_000086135.1 | DNA methylase | - |
| AD867_RS25505 (AD867_25690) | 84661..84882 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| AD867_RS30580 (AD867_25695) | 84842..85328 | + | 487 | Protein_105 | DUF1380 family protein | - |
| AD867_RS25515 (AD867_25700) | 85373..86143 | + | 771 | WP_001006196.1 | hypothetical protein | - |
| AD867_RS25520 (AD867_25705) | 86482..87201 | - | 720 | Protein_107 | IS110 family transposase ISSfl8 | Transposase |
| AD867_RS25525 (AD867_25710) | 87210..88271 | - | 1062 | Protein_108 | IS66 family transposase ISSfl3 | Transposase |
| AD867_RS25540 (AD867_25725) | 89527..90078 | - | 552 | Protein_110 | IS66 family transposase ISSfl3 | Transposase |
| AD867_RS25545 (AD867_25730) | 90075..90425 | - | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| AD867_RS25550 (AD867_25735) | 90422..91096 | - | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| AD867_RS29525 | 91295..91765 | + | 471 | Protein_113 | IS1 family transposase IS1N | Transposase |
| AD867_RS30985 (AD867_25745) | 91924..92562 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| AD867_RS30590 (AD867_25750) | 92677..92946 | + | 270 | Protein_115 | IS3 family transposase ISEc48 | Transposase |
| AD867_RS25580 (AD867_25760) | 93034..94076 | + | 1043 | Protein_116 | IS3 family transposase IS2 | Transposase |
| AD867_RS25585 (AD867_25765) | 94156..94830 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| AD867_RS25590 (AD867_25770) | 94827..95174 | + | 348 | WP_000631709.1 | IS66 family transposase ISSfl3 | Transposase |
| AD867_RS25595 (AD867_25775) | 95194..96795 | + | 1602 | WP_011110603.1 | IS66 family transposase ISSfl3 | Transposase |
| AD867_RS25600 (AD867_25780) | 96984..97169 | + | 186 | Protein_120 | IS21 family transposase IS100 | Transposase |
| AD867_RS30990 (AD867_25785) | 97269..97478 | - | 210 | Protein_121 | peptidoglycan-binding protein | - |
| AD867_RS25610 (AD867_25790) | 97528..97779 | - | 252 | WP_015683204.1 | transporter | - |
| AD867_RS25615 (AD867_25795) | 98231..98515 | + | 285 | WP_011114774.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| AD867_RS25620 (AD867_25800) | 98515..98790 | + | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AD867_RS29545 | 99769..100722 | + | 954 | Protein_126 | IS66 family transposase ISEc49 | Transposase |
| AD867_RS25650 (AD867_25830) | 101258..101476 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AD867_RS25655 (AD867_25835) | 101478..101783 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AD867_RS25660 (AD867_25840) | 102176..103813 | + | 1638 | WP_000936806.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| AD867_RS25665 (AD867_25845) | 104021..104290 | + | 270 | Protein_130 | type II toxin-antitoxin system antitoxin YacA | - |
| AD867_RS31645 | 104290..104459 | + | 170 | Protein_131 | type II toxin-antitoxin system toxin YacB | - |
| AD867_RS25670 (AD867_25850) | 104542..105132 | + | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| AD867_RS25680 (AD867_25860) | 105489..105755 | + | 267 | Protein_133 | IS66 family transposase ISCro1 | Transposase |
| AD867_RS25685 (AD867_25865) | 105818..107086 | + | 1269 | Protein_134 | IS4 family transposase IS4 | Transposase |
| AD867_RS29555 | 107143..108352 | + | 1210 | Protein_135 | IS3 family transposase | - |
| AD867_RS31650 | 108393..108473 | + | 81 | Protein_136 | hypothetical protein | - |
| AD867_RS31075 (AD867_25885) | 108487..108678 | - | 192 | Protein_137 | IS66 family transposase ISCro1 | Transposase |
| AD867_RS25710 (AD867_25890) | 108676..109000 | + | 325 | Protein_138 | IS3 family transposase | - |
| AD867_RS25715 (AD867_25895) | 109030..111936 | - | 2907 | Protein_139 | ankyrin repeat domain-containing protein | - |
| AD867_RS25725 (AD867_25905) | 111902..112054 | + | 153 | WP_061460715.1 | hypothetical protein | - |
| AD867_RS25730 (AD867_25910) | 112418..113260 | + | 843 | WP_000931197.1 | polysaccharide deacetylase family protein | - |
| AD867_RS25735 | 113263..114351 | + | 1089 | WP_010921719.1 | putative hexosyltransferase CapU | - |
| AD867_RS25740 (AD867_25920) | 114356..115306 | + | 951 | WP_015683210.1 | virulence factor VirK | - |
| AD867_RS25745 (AD867_25925) | 115371..116315 | + | 945 | WP_004996485.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| AD867_RS25750 (AD867_25930) | 116469..117392 | - | 924 | Protein_145 | IS630 family transposase IS630 | Transposase |
| AD867_RS25765 (AD867_25945) | 118638..118817 | + | 180 | Protein_147 | hypothetical protein | - |
| AD867_RS25770 (AD867_25950) | 118826..119224 | - | 399 | WP_000911311.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AD867_RS25775 (AD867_25955) | 119224..119451 | - | 228 | WP_000450531.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| AD867_RS25790 (AD867_25970) | 119533..124786 | + | 5254 | Protein_150 | Multifunctional conjugation protein TraI | Relaxase |
| AD867_RS25795 (AD867_25975) | 124806..125552 | + | 747 | WP_000205722.1 | conjugal transfer pilus acetylase TraX | - |
| AD867_RS25800 (AD867_25980) | 125607..126167 | + | 561 | WP_000139368.1 | fertility inhibition protein FinO | - |
| AD867_RS25805 (AD867_25985) | 126298..126510 | + | 213 | WP_004971339.1 | ANR family transcriptional regulator | - |
| AD867_RS25810 (AD867_25990) | 126754..126993 | + | 240 | Protein_154 | thermonuclease family protein | - |
| AD867_RS29585 | 128219..128482 | + | 264 | Protein_156 | thermonuclease family protein | - |
| AD867_RS25825 (AD867_26005) | 128528..128737 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| AD867_RS25830 (AD867_26010) | 128776..129366 | + | 591 | WP_000766818.1 | DUF2726 domain-containing protein | - |
| AD867_RS25835 (AD867_26015) | 129606..129866 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| AD867_RS25840 (AD867_26020) | 130090..130164 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AD867_RS25845 (AD867_26025) | 130157..131014 | + | 858 | WP_000130973.1 | incFII family plasmid replication initiator RepA | - |
| AD867_RS25850 (AD867_26030) | 131715..131906 | + | 192 | WP_000829592.1 | hypothetical protein | - |
| AD867_RS25860 (AD867_26040) | 133341..133529 | - | 189 | WP_000957853.1 | hypothetical protein | - |
| AD867_RS30610 (AD867_26045) | 133675..133830 | + | 156 | Protein_165 | IS256 family transposase ISEc39 | Transposase |
| AD867_RS25870 (AD867_26050) | 133860..135587 | - | 1728 | WP_000597731.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| AD867_RS25875 (AD867_26055) | 135977..136243 | - | 267 | WP_000957716.1 | hypothetical protein | VF |
| AD867_RS31655 | 136352..136482 | - | 131 | Protein_168 | IS1 family transposase | - |
| AD867_RS31660 | 136480..136563 | + | 84 | Protein_169 | IS66 family insertion sequence element accessory protein TnpB | - |
| AD867_RS29605 | 137082..137605 | + | 524 | Protein_170 | IS3 family transposase ISSfl11 | Transposase |
| AD867_RS25890 (AD867_26070) | 137648..137986 | - | 339 | Protein_171 | IS3 family transposase IS629 | Transposase |
| AD867_RS25900 (AD867_26080) | 138060..139042 | + | 983 | Protein_172 | IS3-like element IS911 family transposase | - |
| AD867_RS25910 (AD867_26090) | 139133..140361 | + | 1229 | WP_148936977.1 | IS3 family transposase IS2 | Transposase |
| AD867_RS30615 | 140373..140564 | + | 192 | Protein_174 | IS3 family transposase | - |
| AD867_RS25915 (AD867_26095) | 140588..141281 | - | 694 | Protein_175 | hypothetical protein | VF |
| AD867_RS29620 | 141337..141489 | + | 153 | Protein_176 | IS3 family transposase | - |
| AD867_RS25925 (AD867_26105) | 141771..141908 | - | 138 | WP_011378983.1 | hypothetical protein | - |
| AD867_RS25930 (AD867_26115) | 142870..143817 | + | 948 | WP_005061047.1 | Outer membrane protease IcsP | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|