MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 97864 bp
Accession: NZ_CP011136 Location: 1..97864 Organism: Escherichia coli VR50 Replicon: plasmid pVR50B
Accession: NZ_CP011136 Location: 1..97864 Organism: Escherichia coli VR50 Replicon: plasmid pVR50B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECVR50_RS25495 () | 779..1951 | + | 1173 | Protein_0 | IS21 family transposase IS21 | Transposase |
| ECVR50_RS25505 () | 1951..2580 | + | 630 | Protein_1 | IS21 family transposase IS21 | Transposase |
| ECVR50_RS25515 () | 2635..3845 | + | 1211 | WP_193376833.1 | IS3 family transposase IS629 | Transposase |
| ECVR50_RS25520 () | 3888..4058 | + | 171 | Protein_3 | AAA family ATPase | - |
| ECVR50_RS25525 () | 4120..4785 | + | 666 | Protein_4 | IS66 family transposase ISEc22 | Transposase |
| ECVR50_RS25530 () | 4848..5639 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| ECVR50_RS25535 () | 5646..7616 | - | 1971 | WP_001298664.1 | Hemin receptor | VF |
| ECVR50_RS25545 () | 7898..9126 | + | 1229 | WP_106378881.1 | IS3 family transposase IS2 | Transposase |
| ECVR50_RS29650 () | 9623..9798 | + | 176 | Protein_8 | IS3 family transposase | - |
| ECVR50_RS25550 () | 10024..11193 | - | 1170 | WP_001072359.1 | hypothetical protein | - |
| ECVR50_RS25555 () | 11555..11743 | + | 189 | WP_001332784.1 | hypothetical protein | - |
| ECVR50_RS25560 () | 11864..12604 | + | 741 | WP_001066935.1 | site-specific integrase | - |
| ECVR50_RS25565 () | 12889..13866 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| ECVR50_RS25585 () | 14784..15997 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| ECVR50_RS25590 () | 16068..16784 | - | 717 | Protein_14 | Mov34/MPN/PAD-1 family protein | - |
| ECVR50_RS25600 () | 16844..18057 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| ECVR50_RS28360 () | 18092..19609 | - | 1518 | Protein_16 | ThiF family adenylyltransferase | - |
| ECVR50_RS25615 () | 19606..20787 | - | 1182 | WP_046072950.1 | hypothetical protein | - |
| ECVR50_RS25620 () | 20923..21777 | + | 855 | WP_001280972.1 | WYL domain-containing protein | - |
| ECVR50_RS25625 () | 21790..22308 | + | 519 | WP_000993248.1 | hypothetical protein | - |
| ECVR50_RS25630 () | 22355..23578 | - | 1224 | WP_001696651.1 | tyrosine-type recombinase/integrase | - |
| ECVR50_RS25635 () | 23655..24566 | - | 912 | WP_001442123.1 | hypothetical protein | - |
| ECVR50_RS25640 () | 24563..25561 | - | 999 | WP_000549075.1 | IS91 family transposase ISMno24 | Transposase |
| ECVR50_RS25645 () | 25624..26769 | + | 1146 | Protein_23 | translesion error-prone DNA polymerase V subunit UmuC | - |
| ECVR50_RS25650 () | 26906..27877 | - | 972 | WP_001233385.1 | ParB/RepB/Spo0J family partition protein | - |
| ECVR50_RS25655 () | 27874..29079 | - | 1206 | WP_001442122.1 | Plasmid partition protein A | VF |
| ECVR50_RS25660 () | 29700..30431 | + | 732 | WP_000504263.1 | replication initiation protein | - |
| ECVR50_RS25665 () | 31111..31917 | - | 807 | WP_000016968.1 | site-specific integrase | - |
| ECVR50_RS25670 () | 31918..32223 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| ECVR50_RS25675 () | 32225..32443 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| ECVR50_RS25685 () | 33038..33307 | + | 270 | WP_001554929.1 | hypothetical protein | - |
| ECVR50_RS25690 () | 33295..33891 | + | 597 | WP_001554928.1 | hypothetical protein | - |
| ECVR50_RS25695 () | 33909..34256 | - | 348 | WP_001554927.1 | hypothetical protein | - |
| ECVR50_RS25700 () | 34367..34714 | + | 348 | WP_001554926.1 | hypothetical protein | - |
| ECVR50_RS28385 () | 34732..35158 | - | 427 | Protein_34 | hypothetical protein | - |
| ECVR50_RS25705 () | 35370..35558 | + | 189 | WP_000744815.1 | hypothetical protein | - |
| ECVR50_RS25710 () | 35686..36801 | + | 1116 | WP_001673230.1 | hypothetical protein | - |
| ECVR50_RS25715 () | 37074..37757 | + | 684 | WP_000200414.1 | lasso peptide biosynthesis B2 protein | - |
| ECVR50_RS25720 () | 37757..39481 | + | 1725 | WP_001554923.1 | ATM1-type heavy metal exporter | VF |
| ECVR50_RS25725 () | 40259..40645 | - | 387 | WP_000673985.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| ECVR50_RS25730 () | 40642..40866 | - | 225 | WP_000493532.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| ECVR50_RS25735 () | 41151..41948 | - | 798 | WP_001554960.1 | IS21 family transposase IS21 | Transposase |
| ECVR50_RS25745 () | 41948..43120 | - | 1173 | Protein_42 | IS21 family transposase IS21 | Transposase |
| ECVR50_RS30035 () | 43213..43467 | + | 255 | Protein_43 | hypothetical protein | - |
| ECVR50_RS25755 () | 43533..43742 | - | 210 | WP_024192676.1 | hypothetical protein | - |
| ECVR50_RS25760 () | 44285..44632 | - | 348 | WP_023144239.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| ECVR50_RS25765 () | 44793..46451 | + | 1659 | WP_001529697.1 | FAD-dependent oxidoreductase | - |
| ECVR50_RS25770 () | 47210..47566 | + | 357 | WP_046072951.1 | hypothetical protein | - |
| ECVR50_RS25775 () | 47763..48566 | + | 804 | WP_001523032.1 | replication initiation protein | - |
| ECVR50_RS25780 () | 48899..49774 | + | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| ECVR50_RS25785 () | 49782..50558 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| ECVR50_RS25790 () | 50727..52988 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| ECVR50_RS25795 () | 53057..54232 | + | 1176 | WP_001020413.1 | putative protein YncE | VF |
| ECVR50_RS29660 () | 54755..55060 | - | 306 | Protein_53 | IS91 family transposase | - |
| ECVR50_RS25810 () | 55086..56299 | + | 1214 | WP_136952279.1 | IS3 family transposase IS629 | Transposase |
| ECVR50_RS25815 () | 56320..56871 | - | 552 | WP_046072954.1 | Serine protease EspC | VF |
| ECVR50_RS25820 () | 56973..57951 | + | 979 | Protein_56 | IS5 family transposase | - |
| ECVR50_RS25825 () | 58101..58733 | - | 633 | Protein_57 | histidine-type phosphatase | - |
| ECVR50_RS25830 () | 58855..59340 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| ECVR50_RS25835 () | 59365..59850 | - | 486 | WP_001554949.1 | TlpA family protein disulfide reductase | - |
| ECVR50_RS25840 () | 59837..60532 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| ECVR50_RS25845 () | 60537..61667 | - | 1131 | WP_001554947.1 | ABC transporter permease | - |
| ECVR50_RS25850 () | 61657..62940 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| ECVR50_RS25855 () | 62943..64322 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| ECVR50_RS25860 () | 64426..64953 | - | 528 | WP_000178050.1 | iron transporter | - |
| ECVR50_RS25865 () | 64994..66880 | - | 1887 | WP_123009678.1 | FTR1 family iron permease | - |
| ECVR50_RS25870 () | 67227..68042 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| ECVR50_RS25875 () | 68225..68731 | - | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| ECVR50_RS25880 () | 68721..68948 | - | 228 | WP_077633307.1 | DsbA family protein | - |
| ECVR50_RS28405 () | 69185..69496 | - | 312 | Protein_69 | IS110 family transposase | - |
| ECVR50_RS25885 () | 69551..70255 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| ECVR50_RS25890 () | 70323..71372 | + | 1050 | Protein_71 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| ECVR50_RS25895 () | 71410..71736 | + | 327 | Protein_72 | IS110 family transposase | - |
| ECVR50_RS25900 () | 72114..73586 | - | 1473 | WP_000621194.1 | sensor histidine kinase | - |
| ECVR50_RS25905 () | 73583..74305 | - | 723 | WP_001057737.1 | Transcriptional regulatory protein WalR | VF |
| ECVR50_RS25910 () | 74447..75046 | + | 600 | WP_001177184.1 | cytochrome b/b6 domain-containing protein | - |
| ECVR50_RS25915 () | 75057..75827 | + | 771 | WP_000712166.1 | molybdopterin-dependent oxidoreductase | - |
| ECVR50_RS25920 () | 75857..76096 | + | 240 | WP_001554944.1 | hypothetical protein | - |
| ECVR50_RS30405 () | 76246..76344 | - | 99 | WP_172400466.1 | transposase | - |
| ECVR50_RS25930 () | 76537..76845 | + | 309 | Protein_79 | IS91 family transposase ISSbo1 | Transposase |
| ECVR50_RS29675 () | 77765..78109 | - | 345 | Protein_80 | incFII family plasmid replication initiator RepA | - |
| ECVR50_RS25945 () | 78098..78802 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| ECVR50_RS25950 () | 78854..79449 | - | 596 | Protein_82 | incFII family plasmid replication initiator RepA | - |
| ECVR50_RS28425 () | 79442..79516 | - | 75 | WP_057113837.1 | RepA leader peptide Tap | - |
| ECVR50_RS25955 () | 79751..80008 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| ECVR50_RS25960 () | 80292..80498 | - | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 80485..80546 | + | 62 | NuclAT_0 | - | - |
| - () | 80485..80546 | + | 62 | NuclAT_0 | - | - |
| - () | 80485..80546 | + | 62 | NuclAT_0 | - | - |
| - () | 80485..80546 | + | 62 | NuclAT_0 | - | - |
| ECVR50_RS25965 () | 80841..81152 | + | 312 | WP_000802277.1 | hypothetical protein | - |
| ECVR50_RS30410 () | 81333..81419 | - | 87 | Protein_87 | endonuclease | - |
| ECVR50_RS25970 () | 81664..81876 | - | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| ECVR50_RS25975 () | 82008..82568 | - | 561 | WP_000139325.1 | fertility inhibition protein FinO | - |
| ECVR50_RS25980 () | 82623..83369 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| ECVR50_RS25985 () | 83389..88659 | - | 5271 | WP_016247957.1 | Multifunctional conjugation protein TraI | Relaxase |
| ECVR50_RS25990 () | 88659..90810 | - | 2152 | Protein_92 | type IV conjugative transfer system coupling protein TraD | - |
| ECVR50_RS26220 () | 90866..92083 | + | 1218 | Protein_93 | IS3 family transposase | - |
| ECVR50_RS29690 () | 92164..92457 | - | 294 | WP_148425932.1 | hypothetical protein | - |
| ECVR50_RS26010 () | 92705..92913 | - | 209 | Protein_95 | hypothetical protein | - |
| ECVR50_RS26015 () | 93101..94287 | - | 1187 | Protein_96 | IS91 family transposase ISEc37 | Transposase |
| ECVR50_RS26020 () | 94287..94652 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| ECVR50_RS28455 () | 94741..95397 | - | 657 | Protein_98 | IS30 family transposase IS30D | Transposase |
| ECVR50_RS26025 () | 95455..95706 | - | 252 | Protein_99 | IS3 family transposase IS911 | Transposase |
| ECVR50_RS28470 () | 95761..96381 | + | 621 | WP_071602693.1 | Serine protease EspP | VF |
| ECVR50_RS26040 () | 97067..97486 | - | 420 | WP_000650705.1 | polymer-forming cytoskeletal protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|