MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 165374 bp
Accession: NZ_CP011121 Location: 1..165374 Organism: Acetobacter oryzifermentans strain SLV-7 Replicon: plasmid unnamed1
Accession: NZ_CP011121 Location: 1..165374 Organism: Acetobacter oryzifermentans strain SLV-7 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WG31_RS13230 () | 425..1135 | + | 711 | WP_006115562.1 | phage antirepressor | - |
| WG31_RS13235 () | 1231..1509 | + | 279 | WP_006115563.1 | HU family DNA-binding protein | - |
| WG31_RS15140 () | 1588..1806 | + | 219 | WP_170315285.1 | WGR domain-containing protein | - |
| WG31_RS13240 () | 2037..3116 | - | 1080 | WP_006115564.1 | IS5 family transposase ISMex35 | Transposase |
| WG31_RS13245 () | 3553..3972 | + | 420 | WP_006115565.1 | nucleotidyltransferase domain-containing protein | - |
| WG31_RS13250 () | 3938..4429 | + | 492 | WP_006115566.1 | hypothetical protein | - |
| WG31_RS13255 () | 4429..5472 | + | 1044 | WP_039891567.1 | winged helix-turn-helix domain-containing protein | - |
| WG31_RS13260 () | 5704..6663 | + | 960 | WP_035350857.1 | IS481 family transposase | - |
| WG31_RS13265 () | 6982..7620 | + | 639 | WP_006115571.1 | HPP family protein | - |
| WG31_RS15155 () | 7654..8118 | - | 465 | WP_082823244.1 | helix-turn-helix domain-containing protein | - |
| WG31_RS15160 () | 8317..8895 | - | 579 | WP_006115867.1 | DUF488 domain-containing protein | - |
| WG31_RS13270 () | 8931..9146 | + | 216 | WP_010512346.1 | DUF2945 domain-containing protein | - |
| WG31_RS13275 () | 9160..9432 | - | 273 | WP_063354992.1 | DUF1971 domain-containing protein | - |
| WG31_RS13280 () | 9429..9818 | - | 390 | WP_003631279.1 | PAS domain-containing protein | - |
| WG31_RS13285 () | 9880..10245 | - | 366 | WP_010512344.1 | DUF488 family protein | - |
| WG31_RS13290 () | 10252..12576 | - | 2325 | WP_063354993.1 | cbb3-type cytochrome c oxidase subunit I | - |
| WG31_RS13295 () | 12668..13984 | - | 1317 | WP_006117537.1 | hypothetical protein | - |
| WG31_RS13300 () | 14073..14525 | + | 453 | WP_026019419.1 | Rrf2 family transcriptional regulator | - |
| WG31_RS13305 () | 14527..15018 | + | 492 | WP_035366749.1 | hypothetical protein | - |
| WG31_RS15165 () | 15040..15801 | + | 762 | Protein_20 | IS5 family transposase | - |
| WG31_RS13315 () | 15977..16213 | - | 237 | Protein_21 | IS5/IS1182 family transposase | - |
| WG31_RS13325 () | 16268..17478 | + | 1211 | WP_088364821.1 | IS3 family transposase ISAzsp1 | Transposase |
| WG31_RS13330 () | 17518..18174 | - | 657 | Protein_23 | IS5 family transposase ISMex35 | Transposase |
| WG31_RS13335 () | 18418..19410 | - | 993 | WP_039892090.1 | TonB family protein | - |
| WG31_RS13345 () | 19739..20269 | + | 531 | WP_006117545.1 | hypothetical protein | - |
| WG31_RS13350 () | 20346..22568 | + | 2223 | WP_006117546.1 | TonB-dependent receptor | - |
| WG31_RS15175 () | 22851..23195 | - | 345 | Protein_27 | IS5/IS1182 family transposase | - |
| WG31_RS13355 () | 23335..23634 | + | 300 | WP_019088957.1 | hypothetical protein | - |
| WG31_RS13360 () | 23621..24823 | + | 1203 | WP_006117547.1 | porin | - |
| WG31_RS13365 () | 24955..25632 | + | 678 | Protein_30 | IS5 family transposase ISMex35 | Transposase |
| WG31_RS13370 () | 25727..25933 | + | 207 | Protein_31 | IS1380 family transposase IS1380A | Transposase |
| WG31_RS13380 () | 25989..27199 | + | 1211 | WP_096884248.1 | IS3 family transposase ISAzsp1 | Transposase |
| WG31_RS13385 () | 27294..28814 | - | 1521 | WP_063354997.1 | MFS transporter | - |
| WG31_RS13390 () | 29018..29896 | + | 879 | WP_012813226.1 | Hca operon transcriptional activator HcaR | VF |
| WG31_RS13395 () | 29900..30523 | - | 624 | WP_082823246.1 | alpha/beta hydrolase | - |
| WG31_RS13400 () | 30959..32380 | + | 1422 | WP_063354999.1 | PLP-dependent aminotransferase family protein | - |
| WG31_RS13405 () | 32721..33203 | + | 483 | WP_045543339.1 | MSMEG_0572 family nitrogen starvation response protein | - |
| WG31_RS13410 () | 33228..34202 | + | 975 | WP_063355000.1 | Nit6803 family nitriliase | - |
| WG31_RS13415 () | 34199..35308 | + | 1110 | WP_063355001.1 | MSMEG_0568 family radical SAM protein | - |
| WG31_RS13420 () | 35305..35868 | + | 564 | WP_063355002.1 | GNAT family N-acetyltransferase | - |
| WG31_RS13425 () | 35865..36836 | + | 972 | WP_193561004.1 | sll0787 family AIR synthase-like protein | - |
| WG31_RS13430 () | 36833..38011 | + | 1179 | WP_063355003.1 | Mannosylfructose-phosphate synthase | VF |
| WG31_RS13435 () | 37999..38286 | + | 288 | WP_020936672.1 | MSMEG_0570 family nitrogen starvation response protein | - |
| WG31_RS13440 () | 38303..39550 | + | 1248 | WP_035366434.1 | MSMEG_0569 family flavin-dependent oxidoreductase | - |
| WG31_RS13445 () | 39565..41337 | + | 1773 | WP_063355004.1 | AMP-binding protein | - |
| WG31_RS13450 () | 41378..42139 | - | 762 | WP_063355005.1 | SDR family oxidoreductase | - |
| WG31_RS13455 () | 42241..43020 | + | 780 | Protein_47 | LysR family transcriptional regulator | - |
| WG31_RS13470 () | 44298..44660 | + | 363 | WP_012813198.1 | hypothetical protein | - |
| WG31_RS13475 () | 44874..45134 | + | 261 | WP_003618686.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| WG31_RS13480 () | 45131..45424 | + | 294 | WP_003618711.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| WG31_RS13485 () | 45610..46143 | + | 534 | WP_006117365.1 | hypothetical protein | - |
| WG31_RS13490 () | 46213..47970 | - | 1758 | WP_006117366.1 | oleate hydratase | - |
| WG31_RS13495 () | 48136..48834 | - | 699 | Protein_54 | DUF1275 domain-containing protein | - |
| WG31_RS13500 () | 49120..49752 | + | 633 | Protein_55 | damage-inducible protein | - |
| WG31_RS15955 () | 50986..51312 | + | 327 | WP_063355007.1 | hypothetical protein | - |
| WG31_RS13520 () | 51962..53347 | + | 1386 | WP_006115870.1 | IS1380 family transposase IS1380A | Transposase |
| WG31_RS13525 () | 53513..53785 | - | 273 | WP_063355028.1 | hypothetical protein | - |
| WG31_RS13530 () | 54188..55678 | + | 1491 | WP_006115745.1 | tyrosine-type recombinase/integrase | - |
| WG31_RS13535 () | 56170..57093 | + | 924 | WP_006115744.1 | Plasmid Encoded RepA protein | - |
| WG31_RS13540 () | 57824..58522 | - | 699 | WP_019088965.1 | hypothetical protein | - |
| WG31_RS13545 () | 58519..59193 | - | 675 | WP_170315289.1 | ParA family protein | - |
| WG31_RS13550 () | 59609..64735 | + | 5127 | WP_006115743.1 | DEAD/DEAH box helicase family protein | - |
| WG31_RS13555 () | 64922..65845 | + | 924 | Protein_65 | ParB N-terminal domain-containing protein | - |
| WG31_RS13560 () | 66188..67219 | - | 1032 | WP_010511145.1 | IS110 family transposase ISCc4 | Transposase |
| WG31_RS13565 () | 67238..68296 | + | 1059 | WP_100070283.1 | methionine synthase | - |
| WG31_RS13570 () | 68406..69332 | + | 927 | WP_052583250.1 | LysR family transcriptional regulator | - |
| WG31_RS15185 () | 69393..70147 | + | 755 | WP_087651418.1 | IS5 family transposase | - |
| WG31_RS13585 () | 70290..70586 | - | 297 | WP_006115735.1 | helix-turn-helix domain-containing protein | - |
| WG31_RS13590 () | 70583..70924 | - | 342 | WP_012813272.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| WG31_RS13595 () | 71238..72317 | - | 1080 | WP_012813273.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| WG31_RS13600 () | 72326..73024 | - | 699 | WP_012813274.1 | arsenical resistance protein ArsH | - |
| WG31_RS13605 () | 73048..74346 | - | 1299 | WP_209439405.1 | arsenical efflux pump membrane protein ArsB | - |
| WG31_RS13610 () | 74343..74765 | - | 423 | WP_006115730.1 | arsenate reductase (glutaredoxin) | - |
| WG31_RS13615 () | 74762..75115 | - | 354 | WP_006115729.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| WG31_RS13620 () | 75558..77171 | + | 1614 | WP_006115727.1 | type I restriction-modification system subunit M | - |
| WG31_RS13625 () | 77171..77572 | + | 402 | WP_012813241.1 | nucleotidyltransferase substrate binding protein | - |
| WG31_RS13630 () | 77569..77889 | + | 321 | WP_006115724.1 | nucleotidyltransferase domain-containing protein | - |
| WG31_RS15190 () | 77960..78241 | + | 282 | Protein_80 | restriction endonuclease subunit S | - |
| WG31_RS13635 () | 78359..79609 | - | 1251 | WP_012812328.1 | IS701 family transposase IS1452 | Transposase |
| WG31_RS13640 () | 79808..80767 | + | 960 | WP_035350857.1 | IS481 family transposase | - |
| WG31_RS13645 () | 81014..82405 | - | 1392 | WP_003631146.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| WG31_RS13650 () | 82490..83647 | - | 1158 | WP_003631147.1 | iron-containing alcohol dehydrogenase | - |
| WG31_RS13655 () | 83735..84328 | - | 594 | WP_035350860.1 | TetR/AcrR family transcriptional regulator | - |
| WG31_RS13660 () | 84626..85128 | + | 503 | Protein_86 | delta(1)-pyrroline-2-carboxylate reductase family protein | - |
| WG31_RS15200 () | 85144..85311 | - | 168 | Protein_87 | transposase | - |
| WG31_RS13665 () | 85253..85669 | + | 417 | WP_082823247.1 | DUF1348 family protein | - |
| WG31_RS13670 () | 86406..87587 | + | 1182 | WP_011251546.1 | glutathione-dependent formaldehyde dehydrogenase | - |
| WG31_RS13675 () | 87721..88518 | + | 798 | Protein_90 | IS5 family transposase ISMex42 | Transposase |
| WG31_RS13680 () | 88535..88900 | + | 366 | WP_010512344.1 | DUF488 family protein | - |
| WG31_RS13685 () | 88962..89351 | + | 390 | WP_003631279.1 | PAS domain-containing protein | - |
| WG31_RS13690 () | 89348..89620 | + | 273 | WP_063354992.1 | DUF1971 domain-containing protein | - |
| WG31_RS13695 () | 89634..89849 | - | 216 | WP_010512346.1 | DUF2945 domain-containing protein | - |
| WG31_RS15205 () | 89885..90463 | + | 579 | WP_006115867.1 | DUF488 domain-containing protein | - |
| WG31_RS15210 () | 90662..91147 | + | 486 | WP_082823248.1 | helix-turn-helix domain-containing protein | - |
| WG31_RS13700 () | 91202..91657 | - | 456 | Protein_97 | DUF1275 domain-containing protein | - |
| WG31_RS13705 () | 91657..92919 | - | 1263 | WP_063355009.1 | sodium:proton antiporter | - |
| WG31_RS13710 () | 93051..93344 | - | 294 | WP_003618711.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| WG31_RS13715 () | 93341..93601 | - | 261 | WP_003618686.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| WG31_RS13725 () | 94190..94993 | - | 804 | WP_012813331.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| WG31_RS13730 () | 95000..95827 | - | 828 | WP_063355011.1 | Putative oxidoreductase SadH | VF |
| WG31_RS13735 () | 95879..96448 | - | 570 | WP_035366644.1 | TetR/AcrR family transcriptional regulator | - |
| WG31_RS13745 () | 97372..99027 | + | 1656 | WP_063355029.1 | DDE-type integrase/transposase/recombinase | - |
| WG31_RS13750 () | 99030..99953 | + | 924 | WP_063355012.1 | TniB family NTP-binding protein | - |
| WG31_RS13755 () | 99946..100947 | + | 1002 | WP_063355013.1 | TniQ family protein | - |
| WG31_RS13760 () | 101268..102347 | - | 1080 | WP_063355014.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| WG31_RS15215 () | 102356..102484 | - | 129 | Protein_108 | arsenical resistance protein ArsH | - |
| WG31_RS15225 () | 103800..103910 | - | 111 | Protein_110 | arsenic transporter | - |
| WG31_RS13775 () | 103910..104332 | - | 423 | WP_006115730.1 | arsenate reductase (glutaredoxin) | - |
| WG31_RS15230 () | 104329..104682 | - | 354 | WP_006115729.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| WG31_RS15870 () | 105052..105210 | + | 159 | WP_167348743.1 | hypothetical protein | - |
| WG31_RS13785 () | 105233..106264 | + | 1032 | WP_010511145.1 | IS110 family transposase ISCc4 | Transposase |
| WG31_RS13790 () | 106727..109861 | - | 3135 | WP_063355016.1 | efflux RND transporter permease subunit | - |
| WG31_RS13795 () | 109861..110895 | - | 1035 | WP_063355017.1 | efflux RND transporter periplasmic adaptor subunit | - |
| WG31_RS13800 () | 110892..112334 | - | 1443 | WP_209439404.1 | TolC family protein | - |
| WG31_RS13805 () | 112327..112977 | - | 651 | WP_007284432.1 | cation diffusion facilitator family transporter | - |
| WG31_RS13810 () | 113051..113449 | + | 399 | WP_063355018.1 | helix-turn-helix domain-containing protein | - |
| WG31_RS13815 () | 113804..115468 | + | 1665 | WP_063355031.1 | DDE-type integrase/transposase/recombinase | - |
| WG31_RS13820 () | 115471..116394 | + | 924 | WP_063355019.1 | TniB family NTP-binding protein | - |
| WG31_RS13825 () | 116387..117388 | + | 1002 | WP_082823250.1 | TniQ family protein | - |
| WG31_RS13830 () | 117693..117884 | + | 192 | WP_063355021.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| WG31_RS13845 () | 119189..120100 | + | 912 | Protein_125 | IS701 family transposase IS1452 | Transposase |
| WG31_RS15240 () | 120141..120514 | + | 374 | Protein_126 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| WG31_RS13850 () | 120784..121254 | + | 471 | WP_006115451.1 | hypothetical protein | - |
| WG31_RS13855 () | 121273..122508 | + | 1236 | WP_006115452.1 | TolC family protein | - |
| WG31_RS13860 () | 122505..123659 | + | 1155 | WP_039891523.1 | efflux RND transporter periplasmic adaptor subunit | - |
| WG31_RS13865 () | 123659..126733 | + | 3075 | WP_063355022.1 | efflux RND transporter permease subunit | - |
| WG31_RS13870 () | 126733..127404 | + | 672 | WP_006115455.1 | Transcriptional regulatory protein QseB | VF |
| WG31_RS13875 () | 127401..128753 | + | 1353 | WP_006115456.1 | HAMP domain-containing histidine kinase | - |
| WG31_RS13880 () | 128810..129514 | + | 705 | WP_006115457.1 | VIT family protein | - |
| WG31_RS13885 () | 129998..131218 | + | 1221 | WP_039891527.1 | NarK/NasA family nitrate transporter | - |
| WG31_RS13890 () | 131252..132907 | + | 1656 | WP_201762638.1 | alginate export family protein | - |
| WG31_RS13895 () | 132937..135834 | + | 2898 | WP_063355023.1 | nitrite reductase large subunit NirB | - |
| WG31_RS13900 () | 135842..136426 | + | 585 | Protein_137 | molybdopterin-dependent oxidoreductase | - |
| WG31_RS13905 () | 136464..137260 | + | 797 | Protein_138 | IS5 family transposase ISMex42 | Transposase |
| WG31_RS13910 () | 137390..138160 | + | 771 | WP_006115463.1 | DUF1028 domain-containing protein | - |
| WG31_RS13915 () | 138219..139478 | + | 1260 | WP_012813251.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| WG31_RS13920 () | 139478..140959 | + | 1482 | WP_006115465.1 | aldehyde dehydrogenase | - |
| WG31_RS13925 () | 141097..141504 | + | 408 | WP_003630593.1 | enamine deaminase RidA | - |
| WG31_RS13930 () | 141627..143021 | + | 1395 | WP_063355024.1 | cytosine permease | - |
| WG31_RS13935 () | 143021..144637 | + | 1617 | WP_006117385.1 | GMC family oxidoreductase N-terminal domain-containing protein | - |
| WG31_RS13940 () | 144634..145788 | + | 1155 | WP_006117386.1 | acetylornithine deacetylase | - |
| WG31_RS13945 () | 145883..146809 | + | 927 | WP_006117387.1 | LysR family transcriptional regulator | - |
| WG31_RS13950 () | 147134..148630 | + | 1497 | WP_006117388.1 | outer membrane beta-barrel protein | - |
| WG31_RS13960 () | 148777..149987 | + | 1211 | WP_096884248.1 | IS3 family transposase ISAzsp1 | Transposase |
| WG31_RS13965 () | 150054..150935 | - | 882 | Protein_149 | IS701 family transposase IS1452 | Transposase |
| WG31_RS13970 () | 151127..151900 | + | 774 | WP_003631418.1 | TSUP family transporter | - |
| WG31_RS15250 () | 152214..152692 | - | 479 | Protein_151 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| WG31_RS13975 () | 152817..152927 | + | 111 | WP_063355033.1 | transposase | - |
| WG31_RS13980 () | 152924..153720 | - | 797 | Protein_153 | IS5 family transposase ISMex42 | Transposase |
| WG31_RS13990 () | 153761..154749 | + | 989 | Protein_154 | IS3 family transposase ISPam3 | Transposase |
| WG31_RS13995 () | 154797..155570 | + | 774 | Protein_155 | Conjugal transfer protein TraG | VF |
| WG31_RS15255 () | 155637..155786 | - | 150 | WP_007397858.1 | DUF2474 domain-containing protein | - |
| WG31_RS14000 () | 155773..156792 | - | 1020 | WP_006115550.1 | cytochrome d ubiquinol oxidase subunit II | - |
| WG31_RS14005 () | 156795..158228 | - | 1434 | WP_006115551.1 | cytochrome ubiquinol oxidase subunit I | - |
| WG31_RS14010 () | 158664..159623 | - | 960 | WP_035350857.1 | IS481 family transposase | - |
| WG31_RS14015 () | 159681..159941 | + | 261 | Protein_160 | hypothetical protein | - |
| WG31_RS14020 () | 160014..160286 | + | 273 | WP_006115552.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| WG31_RS14025 () | 160283..160591 | + | 309 | WP_006115553.1 | PIN domain-containing protein | Toxin Detail |
| WG31_RS14030 () | 160690..160944 | + | 255 | WP_006115554.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| WG31_RS14035 () | 160946..161275 | + | 330 | WP_012813213.1 | endoribonuclease MazF | Toxin Detail |
| WG31_RS14040 () | 161332..161532 | + | 201 | WP_012813212.1 | hypothetical protein | - |
| WG31_RS14045 () | 161562..161882 | + | 321 | WP_012813211.1 | hypothetical protein | - |
| WG31_RS14050 () | 161939..162343 | - | 405 | WP_006115557.1 | hypothetical protein | - |
| WG31_RS14055 () | 162356..163171 | - | 816 | WP_006115558.1 | hypothetical protein | - |
| WG31_RS14060 () | 163268..163732 | - | 465 | WP_039891560.1 | hypothetical protein | - |
| WG31_RS14065 () | 163735..164583 | - | 849 | WP_039891563.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|