MGE detailed information
MGE type: Prophage MGE length: 28237 bp
Accession: NZ_CP011078 Location: 2727395..2755631 Organism: Yersinia ruckeri strain Big Creek 74 Replicon: chromosome
Accession: NZ_CP011078 Location: 2727395..2755631 Organism: Yersinia ruckeri strain Big Creek 74 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UGYR_RS12310 () | 2724042..2725385 | - | 1344 | WP_052690339.1 | DUF1173 family protein | - |
| UGYR_RS12315 () | 2725515..2725916 | - | 402 | WP_045844413.1 | hypothetical protein | - |
| UGYR_RS12320 () | 2726002..2727045 | - | 1044 | WP_045844414.1 | inovirus-type Gp2 protein | - |
| UGYR_RS12325 () | 2727395..2727601 | - | 207 | WP_019082618.1 | AlpA family phage regulatory protein | - |
| UGYR_RS17650 () | 2728023..2729282 | + | 1260 | WP_045844415.1 | hypothetical protein | - |
| UGYR_RS12335 () | 2729798..2730235 | + | 438 | WP_045844416.1 | hypothetical protein | - |
| UGYR_RS12340 () | 2730255..2731523 | + | 1269 | WP_045844417.1 | hypothetical protein | - |
| UGYR_RS12345 () | 2731746..2732183 | + | 438 | WP_045844418.1 | hypothetical protein | - |
| UGYR_RS12350 () | 2732266..2733087 | + | 822 | WP_045844419.1 | DUF945 domain-containing protein | - |
| UGYR_RS12355 () | 2733447..2733878 | + | 432 | WP_045844420.1 | antirestriction protein | - |
| UGYR_RS12360 () | 2733970..2734341 | + | 372 | WP_045844421.1 | TA system toxin CbtA family protein | Toxin Detail |
| UGYR_RS12365 () | 2734338..2734706 | + | 369 | WP_045844422.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| UGYR_RS12370 () | 2735172..2736422 | + | 1251 | Protein_2396 | hypothetical protein ; Integrase | Integrase |
| UGYR_RS12375 () | 2736534..2737340 | + | 807 | Protein_2397 | hypothetical protein | - |
| UGYR_RS12380 () | 2737511..2737717 | + | 207 | WP_045844423.1 | AlpA family transcriptional regulator | - |
| UGYR_RS12390 () | 2737892..2739042 | + | 1151 | WP_155393436.1 | IS3 family transposase ISEal1 | Transposase |
| UGYR_RS12415 () | 2740452..2740835 | + | 384 | WP_155393437.1 | hypothetical protein | - |
| UGYR_RS12420 () | 2740980..2742161 | + | 1182 | WP_155393438.1 | DNA cytosine methyltransferase | - |
| UGYR_RS17505 () | 2742275..2745127 | + | 2853 | WP_155393448.1 | ATP-binding protein | - |
| UGYR_RS12430 () | 2745129..2746874 | + | 1746 | WP_045844430.1 | hypothetical protein | - |
| UGYR_RS12435 () | 2746949..2747365 | - | 417 | WP_045844431.1 | hypothetical protein | - |
| UGYR_RS12445 () | 2747635..2748722 | + | 1088 | WP_099511755.1 | IS3 family transposase ISKpn20 | Transposase |
| UGYR_RS12450 () | 2749127..2750071 | - | 945 | WP_038275265.1 | hypothetical protein | - |
| UGYR_RS12455 () | 2750586..2751845 | + | 1260 | Protein_2407 | integrase arm-type DNA-binding domain-containing protein | - |
| UGYR_RS12460 () | 2752019..2752273 | + | 255 | WP_005175264.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| UGYR_RS12465 () | 2752263..2752553 | + | 291 | WP_038275268.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| UGYR_RS12470 () | 2752817..2753239 | + | 423 | WP_052690340.1 | restriction endonuclease subunit S | - |
| UGYR_RS12475 () | 2753333..2753908 | + | 576 | WP_045844432.1 | DUF4433 domain-containing protein | - |
| UGYR_RS12480 () | 2753911..2754567 | + | 657 | WP_045844433.1 | DUF4433 domain-containing protein | Toxin Detail |
| UGYR_RS12485 () | 2754564..2755631 | + | 1068 | WP_038245756.1 | macro domain-containing protein | Antitoxin Detail |
| UGYR_RS17065 () | 2755652..2755918 | + | 267 | Protein_2414 | hypothetical protein | - |
| UGYR_RS17070 () | 2755937..2756335 | - | 399 | Protein_2415 | DDE-type integrase/transposase/recombinase | - |
| UGYR_RS12490 () | 2756340..2756630 | + | 291 | Protein_2416 | transposase | - |
| UGYR_RS17510 () | 2756644..2756742 | - | 99 | Protein_2417 | transposase | - |
| UGYR_RS17515 () | 2756778..2756906 | - | 129 | Protein_2418 | helix-turn-helix domain-containing protein | - |
| UGYR_RS12495 () | 2757056..2757286 | + | 231 | WP_073990333.1 | DUF4942 domain-containing protein | - |
| UGYR_RS12500 () | 2757361..2757756 | + | 396 | WP_038245317.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| UGYR_RS12505 () | 2757749..2758699 | + | 951 | WP_045844434.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| UGYR_RS17325 () | 2759072..2759356 | + | 285 | WP_038245319.1 | antirestriction protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|