MGE detailed information
MGE type: Prophage MGE length: 53754 bp
Accession: NZ_CP010314 Location: 2624983..2678736 Organism: Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet) Replicon: chromosome
Accession: NZ_CP010314 Location: 2624983..2678736 Organism: Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RP72_RS13830 () | 2620006..2620623 | - | 618 | WP_004398514.1 | competence protein ComEA | - |
| RP72_RS13835 () | 2620707..2621528 | + | 822 | WP_004398597.1 | late competence protein ComER | - |
| RP72_RS13840 () | 2621594..2622337 | - | 744 | WP_003229973.1 | methyltransferase domain-containing protein | - |
| RP72_RS13845 () | 2622334..2622690 | - | 357 | WP_003229971.1 | ribosome silencing factor | - |
| RP72_RS13850 () | 2622708..2623268 | - | 561 | WP_004399059.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| RP72_RS13855 () | 2623258..2623827 | - | 570 | WP_004398676.1 | nicotinate-nucleotide adenylyltransferase | - |
| RP72_RS13860 () | 2623839..2624129 | - | 291 | WP_003226133.1 | ribosome assembly RNA-binding protein YhbY | - |
| RP72_RS13865 () | 2624123..2624965 | - | 843 | WP_003229967.1 | shikimate dehydrogenase | - |
| RP72_RS13870 () | 2624983..2626083 | - | 1101 | WP_003229966.1 | ribosome biogenesis GTPase YqeH | - |
| RP72_RS13875 () | 2626087..2626605 | - | 519 | WP_003226126.1 | YqeG family HAD IIIA-type phosphatase | - |
| RP72_RS13880 () | 2626967..2627107 | + | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| RP72_RS13890 () | 2627413..2628144 | - | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| RP72_RS13895 () | 2628396..2629148 | - | 753 | WP_003229963.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| RP72_RS13900 () | 2629335..2629961 | + | 627 | WP_003229962.1 | TVP38/TMEM64 family protein | - |
| RP72_RS13905 () | 2629980..2630873 | - | 894 | WP_003229961.1 | decarboxylating 6-phosphogluconate dehydrogenase | - |
| RP72_RS13910 () | 2631125..2631847 | + | 723 | WP_010886572.1 | hypothetical protein | - |
| RP72_RS13915 () | 2631880..2632290 | - | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | - |
| RP72_RS13920 () | 2632486..2632833 | + | 348 | Protein_2663 | sigma-70 family RNA polymerase sigma factor | - |
| RP72_RS13925 () | 2632864..2634366 | - | 1503 | WP_010886573.1 | site-specific DNA recombinase SpoIVCA | - |
| RP72_RS13930 () | 2634815..2635234 | - | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| RP72_RS13935 () | 2635246..2636286 | - | 1041 | WP_004398718.1 | arsenite efflux transporter Acr3 | - |
| RP72_RS13940 () | 2636309..2636749 | - | 441 | WP_003229954.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| RP72_RS13945 () | 2636810..2637127 | - | 318 | WP_004399122.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| RP72_RS13950 () | 2637499..2638263 | - | 765 | WP_004398670.1 | YqcI/YcgG family protein | - |
| RP72_RS13955 () | 2638706..2639833 | + | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| RP72_RS13960 () | 2639823..2639957 | + | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| RP72_RS22765 () | 2640067..2640225 | + | 159 | WP_003245945.1 | hypothetical protein | - |
| RP72_RS13970 () | 2640595..2642190 | + | 1596 | WP_004399034.1 | type II toxin-antitoxin system toxin ribonuclease YqcG | - |
| RP72_RS13975 () | 2642205..2642783 | + | 579 | WP_009967790.1 | type II toxin-antitoxin system antitoxin YqcF | - |
| RP72_RS23350 () | 2642901..2643047 | + | 147 | WP_009967791.1 | hypothetical protein | - |
| RP72_RS13985 () | 2643044..2643406 | - | 363 | WP_003229947.1 | hypothetical protein | - |
| RP72_RS13990 () | 2643422..2643901 | - | 480 | WP_004399085.1 | hypothetical protein | - |
| RP72_RS13995 () | 2644066..2644884 | - | 819 | WP_003229946.1 | N-acetylmuramoyl-L-alanine amidase CwlA | - |
| RP72_RS14000 () | 2644929..2645351 | - | 423 | WP_003246208.1 | holin family protein | - |
| RP72_RS14005 () | 2645396..2646289 | - | 894 | WP_003246010.1 | hypothetical protein | - |
| RP72_RS14010 () | 2646377..2646541 | - | 165 | WP_003229944.1 | XkdX family protein | - |
| RP72_RS14015 () | 2646538..2646873 | - | 336 | WP_009967793.1 | XkdW family protein | - |
| RP72_RS14020 () | 2646883..2647983 | - | 1101 | WP_003229943.1 | pyocin knob domain-containing protein | - |
| RP72_RS14025 () | 2647986..2648258 | - | 273 | WP_003229942.1 | hypothetical protein | - |
| RP72_RS14030 () | 2648255..2648833 | - | 579 | WP_003229941.1 | YmfQ family protein | - |
| RP72_RS14035 () | 2648817..2649863 | - | 1047 | WP_003229940.1 | baseplate J/gp47 family protein | - |
| RP72_RS14040 () | 2649856..2650281 | - | 426 | WP_004398572.1 | DUF2634 domain-containing protein | - |
| RP72_RS14045 () | 2650294..2650557 | - | 264 | WP_003229938.1 | DUF2577 family protein | - |
| RP72_RS14050 () | 2650554..2651534 | - | 981 | WP_004398524.1 | hypothetical protein | - |
| RP72_RS14055 () | 2651547..2652206 | - | 660 | WP_004398548.1 | LysM peptidoglycan-binding domain-containing protein | - |
| RP72_RS14060 () | 2652199..2656956 | - | 4758 | WP_003246092.1 | transglycosylase SLT domain-containing protein | - |
| RP72_RS22770 () | 2656959..2657096 | - | 138 | WP_003229934.1 | hypothetical protein | - |
| RP72_RS14070 () | 2657138..2657587 | - | 450 | WP_003229933.1 | phage portal protein | - |
| RP72_RS14075 () | 2657733..2657912 | + | 180 | WP_004398662.1 | type I toxin-antitoxin system toxin TxpA | Toxin Detail |
| - () | 2657836..2658058 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2657836..2658058 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2657836..2658058 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2657836..2658058 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| RP72_RS23355 () | 2658292..2658381 | + | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| RP72_RS14080 () | 2658635..2659078 | - | 444 | WP_003229930.1 | phage tail tube protein | - |
| RP72_RS14085 () | 2659081..2660481 | - | 1401 | WP_003229929.1 | phage tail sheath family protein | - |
| RP72_RS14090 () | 2660482..2660673 | - | 192 | WP_010886574.1 | hypothetical protein | - |
| RP72_RS14095 () | 2660670..2661107 | - | 438 | WP_003229927.1 | hypothetical protein | - |
| RP72_RS14100 () | 2661120..2661623 | - | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| RP72_RS14105 () | 2661620..2661982 | - | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| RP72_RS14110 () | 2661979..2662374 | - | 396 | WP_004398566.1 | DUF3199 family protein | - |
| RP72_RS14115 () | 2662378..2662689 | - | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| RP72_RS14120 () | 2662700..2663635 | - | 936 | WP_003229922.1 | phage major capsid protein | - |
| RP72_RS14125 () | 2663654..2664622 | - | 969 | WP_003229921.1 | phage portal protein | - |
| RP72_RS14130 () | 2664655..2665308 | - | 654 | WP_003229920.1 | hypothetical protein | - |
| RP72_RS14135 () | 2665349..2666266 | - | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| RP72_RS14140 () | 2666263..2667795 | - | 1533 | WP_004398894.1 | phage portal protein | - |
| RP72_RS14145 () | 2667799..2669094 | - | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| RP72_RS14150 () | 2669087..2669806 | - | 720 | WP_003229916.1 | hypothetical protein | - |
| RP72_RS14155 () | 2669874..2670338 | - | 465 | WP_004398685.1 | hypothetical protein | - |
| RP72_RS14160 () | 2670482..2670937 | - | 456 | WP_004398775.1 | hypothetical protein | - |
| RP72_RS14165 () | 2671135..2672064 | + | 930 | WP_003229913.1 | hypothetical protein | - |
| RP72_RS14170 () | 2672138..2672344 | - | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| RP72_RS14175 () | 2672426..2672854 | - | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| RP72_RS22780 () | 2672950..2673099 | - | 150 | WP_003229910.1 | hypothetical protein | - |
| RP72_RS14190 () | 2673090..2674031 | - | 942 | WP_075058863.1 | ATP-binding protein | - |
| RP72_RS14195 () | 2673913..2674590 | - | 678 | WP_010886575.1 | DNA-binding protein | - |
| RP72_RS14200 () | 2674666..2675520 | - | 855 | WP_003229907.1 | recombinase RecT | - |
| RP72_RS14205 () | 2675523..2676482 | - | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| RP72_RS14210 () | 2676588..2676782 | - | 195 | WP_003229905.1 | hypothetical protein | - |
| RP72_RS23360 () | 2676742..2676915 | - | 174 | WP_119123069.1 | hypothetical protein | - |
| RP72_RS14215 () | 2676912..2677169 | - | 258 | WP_003245994.1 | hypothetical protein | - |
| RP72_RS14220 () | 2677166..2677735 | - | 570 | WP_004398626.1 | helix-turn-helix transcriptional regulator | - |
| RP72_RS22785 () | 2677809..2677949 | - | 141 | WP_003229902.1 | hypothetical protein | - |
| RP72_RS14230 () | 2677979..2678209 | - | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| RP72_RS14235 () | 2678386..2678736 | + | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
| RP72_RS22790 () | 2679003..2679170 | - | 168 | WP_003229900.1 | hypothetical protein | - |
| RP72_RS14245 () | 2679526..2680062 | - | 537 | WP_004399117.1 | AAA family ATPase | - |
| RP72_RS14250 () | 2680331..2680849 | + | 519 | WP_004399097.1 | ImmA/IrrE family metallo-endopeptidase | - |
| RP72_RS14255 () | 2680855..2681247 | + | 393 | Protein_2731 | sigma-70 family RNA polymerase sigma factor | - |
| RP72_RS23365 () | 2681247..2681363 | + | 117 | WP_003229898.1 | hypothetical protein | - |
| RP72_RS22795 () | 2681329..2681529 | - | 201 | Protein_2733 | recombinase family protein | - |
| RP72_RS22800 () | 2681472..2681636 | - | 165 | WP_010886576.1 | hypothetical protein | - |
| RP72_RS14265 () | 2682181..2682597 | - | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | Prophage | TA6322, TA10201, TA20260 | NC_000964 | 2645490..2699243 | 0 |