MGE detailed information
MGE type: Mobilizable plasmid MGE length: 62376 bp
Accession: NZ_CP010241 Location: 1..62376 Organism: Escherichia coli strain C7 Replicon: plasmid A
Accession: NZ_CP010241 Location: 1..62376 Organism: Escherichia coli strain C7 Replicon: plasmid A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG29_RS28620 () | 2..295 | - | 294 | Protein_0 | RepB family plasmid replication initiator protein | - |
| RG29_RS28625 () | 342..1148 | - | 807 | WP_073519399.1 | site-specific integrase | - |
| RG29_RS28630 () | 1149..1454 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| RG29_RS28635 () | 1456..1674 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| RG29_RS28640 () | 2231..6052 | - | 3822 | WP_032232022.1 | hypothetical protein | - |
| RG29_RS30520 () | 6296..6457 | + | 162 | WP_000251882.1 | hypothetical protein | - |
| RG29_RS28645 () | 6475..6822 | - | 348 | WP_001775009.1 | hypothetical protein | - |
| RG29_RS28650 () | 6941..7288 | + | 348 | WP_001604436.1 | hypothetical protein | - |
| RG29_RS28655 () | 7306..8409 | - | 1104 | Protein_8 | colicin | - |
| RG29_RS28670 () | 9174..10151 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| RG29_RS28675 () | 10430..11170 | - | 741 | WP_001066934.1 | tyrosine-type recombinase/integrase | - |
| RG29_RS28680 () | 11291..11440 | - | 150 | WP_032164232.1 | hypothetical protein | - |
| RG29_RS28685 () | 12460..12675 | + | 216 | WP_000109991.1 | hypothetical protein | - |
| RG29_RS28690 () | 12730..12873 | + | 144 | Protein_13 | Fimbria A protein | VF |
| RG29_RS28695 () | 13424..14350 | - | 927 | WP_024243976.1 | Right origin-binding protein | VF |
| RG29_RS28700 () | 14604..15143 | + | 540 | WP_024182495.1 | hypothetical protein | VF |
| RG29_RS28705 () | 15211..17583 | + | 2373 | WP_050553110.1 | Outer membrane usher protein YraJ | VF |
| RG29_RS28710 () | 17576..18352 | + | 777 | WP_001042687.1 | Chaperone protein FaeE | VF |
| RG29_RS28715 () | 18395..18886 | + | 492 | WP_000728530.1 | hypothetical protein | VF |
| RG29_RS28720 () | 19108..19971 | + | 864 | WP_000751773.1 | hypothetical protein | - |
| RG29_RS28725 () | 20156..20887 | + | 732 | WP_000780632.1 | hypothetical protein | VF |
| RG29_RS28730 () | 20917..21681 | + | 765 | WP_001434433.1 | hypothetical protein | VF |
| RG29_RS28740 () | 22000..23149 | + | 1150 | Protein_22 | IS3 family transposase ISEc16 | Transposase |
| RG29_RS28745 () | 23909..24606 | - | 698 | Protein_23 | IS1-like element IS1A family transposase | - |
| RG29_RS28765 () | 24679..25164 | + | 486 | WP_077827312.1 | surface exclusion protein | - |
| RG29_RS28770 () | 25213..25944 | + | 732 | WP_024248462.1 | complement resistance protein TraT | - |
| RG29_RS28775 () | 26197..28350 | + | 2154 | WP_040092615.1 | type IV conjugative transfer system coupling protein TraD | - |
| RG29_RS28780 () | 28359..28757 | - | 399 | WP_000911317.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| RG29_RS28785 () | 28757..28984 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| RG29_RS28790 () | 29066..34336 | + | 5271 | WP_077898326.1 | Multifunctional conjugation protein TraI | Relaxase |
| RG29_RS28795 () | 34356..35102 | + | 747 | WP_000205747.1 | conjugal transfer pilus acetylase TraX | - |
| RG29_RS28800 () | 35157..35717 | + | 561 | WP_024244031.1 | fertility inhibition protein FinO | - |
| RG29_RS28805 () | 35849..36061 | + | 213 | WP_032323685.1 | hypothetical protein | - |
| - () | 36645..36706 | - | 62 | NuclAT_1 | - | - |
| - () | 36645..36706 | - | 62 | NuclAT_1 | - | - |
| - () | 36645..36706 | - | 62 | NuclAT_1 | - | - |
| - () | 36645..36706 | - | 62 | NuclAT_1 | - | - |
| RG29_RS28815 () | 36693..36899 | + | 207 | WP_032232098.1 | type I toxin-antitoxin system Hok family toxin | - |
| RG29_RS28820 () | 37221..37523 | + | 303 | WP_001346256.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| RG29_RS28825 () | 37514..37996 | + | 483 | WP_000405244.1 | GNAT family N-acetyltransferase | Toxin Detail |
| RG29_RS28830 () | 38305..38562 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| RG29_RS28840 () | 38797..38871 | + | 75 | WP_032164225.1 | RepA leader peptide Tap | - |
| RG29_RS28845 () | 38864..39346 | + | 483 | WP_000247130.1 | hypothetical protein | - |
| RG29_RS28850 () | 39339..40196 | + | 858 | WP_000774299.1 | incFII family plasmid replication initiator RepA | - |
| RG29_RS28860 () | 41062..41346 | + | 285 | WP_024182491.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| RG29_RS28865 () | 41346..41621 | + | 276 | WP_000421253.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RG29_RS28870 () | 41746..42498 | + | 753 | Protein_42 | Tn3 family transposase TnpA_Tn3 | Transposase |
| RG29_RS28875 () | 42495..42845 | - | 351 | Protein_43 | transposase family protein | - |
| RG29_RS28880 () | 42947..43314 | - | 368 | Protein_44 | IS110 family transposase ISEc11 | Transposase |
| RG29_RS28885 () | 43419..43619 | - | 201 | WP_024182490.1 | hypothetical protein | - |
| RG29_RS28905 () | 44336..45033 | + | 698 | Protein_46 | IS1-like element IS1A family transposase | - |
| RG29_RS28910 () | 45201..45584 | - | 384 | WP_001063020.1 | relaxosome protein TraM | - |
| RG29_RS28920 () | 45936..46526 | + | 591 | WP_001375132.1 | hypothetical protein | VF |
| RG29_RS28925 () | 46822..47643 | - | 822 | WP_001234417.1 | DUF945 domain-containing protein | - |
| RG29_RS28930 () | 47762..48049 | - | 288 | WP_000107542.1 | hypothetical protein | - |
| RG29_RS30525 () | 48074..48280 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| RG29_RS30530 () | 48350..48709 | + | 360 | Protein_52 | hypothetical protein | - |
| RG29_RS28945 () | 48947..49105 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 49170..49368 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49170..49368 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49170..49368 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49170..49368 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| RG29_RS28955 () | 49380..50099 | - | 720 | WP_000116348.1 | plasmid SOS inhibition protein A | - |
| RG29_RS28960 () | 50096..50530 | - | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| RG29_RS28965 () | 50585..52543 | - | 1959 | WP_000117173.1 | ParB/RepB/Spo0J family partition protein | - |
| RG29_RS28970 () | 52609..52842 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| RG29_RS28975 () | 52899..53351 | - | 453 | WP_000290802.1 | single-stranded DNA-binding protein | - |
| RG29_RS30535 () | 53669..54178 | + | 510 | WP_032163513.1 | hypothetical protein | - |
| RG29_RS28995 () | 54148..54339 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| RG29_RS29000 () | 54336..54758 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| RG29_RS29005 () | 54805..55107 | - | 303 | WP_072095193.1 | antirestriction protein | - |
| RG29_RS30540 () | 55644..56420 | - | 777 | WP_001005032.1 | hypothetical protein | - |
| RG29_RS29020 () | 56466..57020 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| RG29_RS29025 () | 56914..57135 | - | 222 | WP_001104904.1 | hypothetical protein | - |
| RG29_RS29030 () | 57136..57819 | - | 684 | WP_000085939.1 | DNA methylase | - |
| RG29_RS29035 () | 57896..58201 | - | 306 | WP_032163515.1 | hypothetical protein | - |
| RG29_RS29040 () | 58205..59106 | - | 902 | Protein_68 | DUF1281 domain-containing protein | - |
| RG29_RS29055 () | 60016..60987 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| RG29_RS29060 () | 60987..62153 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|