MGE detailed information
MGE type: Genomic_island MGE length: 118532 bp
Accession: NZ_CP010237 Location: 760064..878595 Organism: Escherichia coli strain S43 Replicon: chromosome
Accession: NZ_CP010237 Location: 760064..878595 Organism: Escherichia coli strain S43 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG71_RS04115 () | 755066..756574 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| RG71_RS04120 () | 756709..756873 | + | 165 | Protein_731 | IS3 family transposase | - |
| RG71_RS04130 () | 757116..758192 | + | 1077 | WP_073528146.1 | IS110 family transposase | - |
| RG71_RS27155 () | 758209..758517 | + | 309 | Protein_733 | DDE-type integrase/transposase/recombinase | - |
| RG71_RS04140 () | 758415..759713 | - | 1299 | WP_000342159.1 | IS256 family transposase | - |
| RG71_RS27160 () | 759931..760095 | - | 165 | Protein_735 | transposase domain-containing protein | - |
| RG71_RS27165 () | 760040..760303 | - | 264 | WP_001247776.1 | transposase | - |
| RG71_RS27170 () | 760318..760581 | + | 264 | WP_001295708.1 | hypothetical protein | - |
| RG71_RS04165 () | 760810..761091 | + | 282 | WP_000643628.1 | helix-turn-helix domain-containing protein | - |
| RG71_RS04170 () | 761126..761695 | + | 570 | WP_000350435.1 | Spore protein SP21 | VF |
| RG71_RS04175 () | 761801..764683 | + | 2883 | WP_000101612.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| RG71_RS04180 () | 764683..764874 | + | 192 | WP_073528147.1 | hypothetical protein | - |
| RG71_RS04185 () | 764935..766662 | + | 1728 | WP_000412528.1 | FtsH/Yme1/Tma family ATP-dependent metallopeptidase | - |
| RG71_RS04190 () | 766750..767208 | + | 459 | WP_001275372.1 | Spore protein SP21 | VF |
| RG71_RS04195 () | 767231..768145 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| RG71_RS04200 () | 768248..769135 | + | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| RG71_RS04205 () | 769225..769836 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| RG71_RS04210 () | 769916..771061 | + | 1146 | WP_073528082.1 | hypothetical protein | - |
| RG71_RS04215 () | 771051..771491 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| RG71_RS04220 () | 771495..773210 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| RG71_RS04225 () | 773207..773704 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| RG71_RS04230 () | 773682..774647 | + | 966 | WP_021553242.1 | M48 family metalloprotease | - |
| RG71_RS04235 () | 774672..775823 | + | 1152 | WP_000323729.1 | Putative serine protease HhoB | VF |
| RG71_RS26570 () | 776048..776617 | - | 570 | Protein_753 | IS5 family transposase ISThi1 | Transposase |
| RG71_RS26575 () | 776613..777307 | - | 695 | Protein_754 | IS5 family transposase ISThi1 | Transposase |
| RG71_RS04245 () | 777739..778602 | + | 864 | WP_016154552.1 | GTPase family protein | - |
| RG71_RS04250 () | 778694..779515 | + | 822 | WP_001548153.1 | DUF945 domain-containing protein | - |
| RG71_RS04255 () | 779732..780433 | + | 702 | WP_021553244.1 | WYL domain-containing protein | - |
| RG71_RS04260 () | 780474..780710 | + | 237 | WP_001144029.1 | hypothetical protein | - |
| RG71_RS04265 () | 780710..781153 | + | 444 | WP_021553245.1 | hypothetical protein | - |
| RG71_RS04270 () | 781176..781643 | + | 468 | WP_001385283.1 | hypothetical protein | - |
| RG71_RS26580 () | 781720..781959 | + | 240 | Protein_761 | DUF905 domain-containing protein | - |
| RG71_RS04280 () | 782057..782515 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| RG71_RS04285 () | 782531..783007 | + | 477 | WP_000811693.1 | RadC family protein | - |
| RG71_RS04290 () | 783016..783237 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| RG71_RS04295 () | 783256..783573 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| RG71_RS04300 () | 783594..783935 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| RG71_RS04310 () | 784507..785760 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| RG71_RS04315 () | 785772..786875 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| RG71_RS04320 () | 787163..788218 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| RG71_RS04325 () | 788257..788658 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| RG71_RS04330 () | 788716..789960 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 789376..789456 | - | 81 | NuclAT_8 | - | - |
| - () | 789376..789456 | - | 81 | NuclAT_8 | - | - |
| - () | 789376..789456 | - | 81 | NuclAT_8 | - | - |
| - () | 789376..789456 | - | 81 | NuclAT_8 | - | - |
| RG71_RS04335 () | 790052..790510 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| RG71_RS04340 () | 790771..792228 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| RG71_RS04345 () | 792285..792806 | - | 522 | Protein_774 | peptide chain release factor H | - |
| RG71_RS04350 () | 792805..793008 | - | 204 | Protein_775 | RNA ligase RtcB family protein | - |
| RG71_RS04355 () | 793254..793706 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| RG71_RS04360 () | 793716..794114 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| RG71_RS04365 () | 794117..794410 | - | 294 | WP_073528149.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| RG71_RS04370 () | 794462..795517 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| RG71_RS04375 () | 795588..796373 | - | 786 | WP_000207587.1 | Chemotaxis protein LafU | VF |
| RG71_RS04380 () | 796345..798057 | + | 1713 | Protein_781 | Flagellar biosynthesis protein FlhA | VF |
| RG71_RS04395 () | 798273..798770 | - | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| RG71_RS04405 () | 798946..799719 | - | 774 | WP_141010784.1 | Murein DD-endopeptidase MepH | VF |
| RG71_RS04410 () | 799905..800165 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| RG71_RS04415 () | 800168..800437 | + | 270 | Protein_785 | type II toxin-antitoxin system YafQ family toxin | - |
| RG71_RS04420 () | 800593..801333 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| RG71_RS04425 () | 801304..802071 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| RG71_RS04430 () | 802277..802855 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| RG71_RS04435 () | 803095..805539 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| RG71_RS04440 () | 805582..806028 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| RG71_RS04445 () | 806209..806979 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| RG71_RS04450 () | 807020..808156 | - | 1137 | WP_001393308.1 | ISAs1 family transposase ISEc1 | Transposase |
| RG71_RS04455 () | 808587..808979 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| RG71_RS04460 () | 808957..812619 | - | 3663 | Protein_794 | Protein RhsD | VF |
| RG71_RS04465 () | 812609..813532 | + | 924 | Protein_795 | hypothetical protein | VF |
| RG71_RS04470 () | 813543..814895 | + | 1353 | WP_073528152.1 | hypothetical protein | VF |
| RG71_RS04475 () | 814919..815401 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| RG71_RS04480 () | 815445..816359 | + | 915 | WP_000908066.1 | hypothetical protein | - |
| RG71_RS04485 () | 816369..816848 | + | 480 | WP_073528153.1 | hypothetical protein | - |
| RG71_RS04490 () | 816985..817770 | - | 786 | WP_001086141.1 | lipoprotein | - |
| RG71_RS04495 () | 818287..819495 | + | 1209 | WP_016236915.1 | Prophage integrase IntA ; Integrase | Integrase |
| RG71_RS04500 () | 819554..820027 | + | 474 | WP_001614377.1 | hypothetical protein | - |
| RG71_RS04505 () | 820079..820777 | - | 699 | WP_001614376.1 | inovirus Gp2 family protein | - |
| RG71_RS04510 () | 821101..822627 | - | 1527 | WP_001614374.1 | DUF3987 domain-containing protein | - |
| RG71_RS04515 () | 822652..822876 | - | 225 | WP_001614372.1 | AlpA family phage regulatory protein | - |
| RG71_RS04520 () | 822980..824827 | + | 1848 | WP_016236914.1 | hypothetical protein | - |
| RG71_RS04525 () | 825604..825786 | + | 183 | WP_023564427.1 | hypothetical protein | - |
| RG71_RS04530 () | 825845..826138 | - | 294 | Protein_808 | hypothetical protein | - |
| RG71_RS04535 () | 826207..826452 | + | 246 | Protein_809 | IS3 family transposase ISEc17 | Transposase |
| RG71_RS04540 () | 826469..827166 | - | 698 | Protein_810 | IS1 family transposase IS1R | Transposase |
| RG71_RS04560 () | 827222..827716 | + | 495 | Protein_811 | GIY-YIG nuclease family protein | - |
| RG71_RS04565 () | 827998..828978 | - | 981 | WP_073528155.1 | IS5 family transposase ISKpn26 | Transposase |
| RG71_RS04570 () | 829229..829642 | + | 414 | Protein_813 | gluconate permease | - |
| RG71_RS04575 () | 829692..830387 | - | 696 | WP_000370411.1 | lactate utilization protein C | - |
| RG71_RS04580 () | 830380..831807 | - | 1428 | WP_001547749.1 | iron-sulfur cluster-binding protein | - |
| RG71_RS04585 () | 831818..832537 | - | 720 | WP_001102105.1 | (Fe-S)-binding protein | - |
| RG71_RS04590 () | 832612..834357 | - | 1746 | WP_023157191.1 | D-lactate dehydrogenase | - |
| RG71_RS04595 () | 834745..836298 | + | 1554 | WP_000545262.1 | L-lactate permease | - |
| RG71_RS04615 () | 836556..837253 | + | 698 | Protein_819 | IS1 family transposase IS1R | Transposase |
| RG71_RS04620 () | 837533..838177 | + | 645 | WP_001547746.1 | HTH-type transcriptional regulator AcrR | VF |
| RG71_RS04625 () | 838301..838705 | + | 405 | WP_000334957.1 | Regulatory protein SoxS | VF |
| RG71_RS04630 () | 838718..840502 | - | 1785 | Protein_822 | diguanylate cyclase | - |
| RG71_RS04635 () | 840622..841731 | - | 1110 | WP_001211967.1 | AI-2E family transporter | - |
| RG71_RS04640 () | 842095..843372 | + | 1278 | Protein_824 | S-methylmethionine permease | - |
| RG71_RS04645 () | 843370..843648 | - | 279 | Protein_825 | metalloregulator ArsR/SmtB family transcription factor | - |
| RG71_RS04650 () | 843868..845643 | - | 1776 | WP_032170439.1 | ATP-binding protein | - |
| RG71_RS04655 () | 845640..846788 | - | 1149 | WP_032170441.1 | SIR2 family protein | - |
| RG71_RS04665 () | 847400..848347 | + | 948 | WP_032170443.1 | hypothetical protein | - |
| RG71_RS04670 () | 848328..849257 | - | 930 | WP_032170444.1 | DNA (cytosine-5-)-methyltransferase | - |
| RG71_RS04690 () | 850994..851620 | - | 627 | Protein_831 | Prophage integrase IntA ; Integrase | Integrase |
| RG71_RS04695 () | 851704..852087 | + | 384 | WP_001201739.1 | IS66 family transposase IS682 | Transposase |
| RG71_RS04700 () | 852084..852431 | + | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| RG71_RS04705 () | 852481..854016 | + | 1536 | WP_021553945.1 | IS66 family transposase ISSgsp1 | Transposase |
| RG71_RS04715 () | 854648..857686 | - | 3039 | WP_199771224.1 | DEAD/DEAH box helicase family protein | - |
| RG71_RS04720 () | 857688..858266 | - | 579 | Protein_836 | site-specific DNA-methyltransferase | - |
| RG71_RS04730 () | 858420..859401 | - | 982 | Protein_837 | IS5 family transposase ISKpn26 | Transposase |
| RG71_RS27700 () | 860194..860847 | - | 654 | Protein_838 | site-specific DNA-methyltransferase | - |
| RG71_RS04740 () | 860908..861762 | - | 855 | WP_060617909.1 | DUF4391 domain-containing protein | - |
| RG71_RS04745 () | 861755..865021 | - | 3267 | WP_060617908.1 | DEAD/DEAH box helicase family protein | - |
| RG71_RS04750 () | 865471..865776 | + | 306 | Protein_841 | IS110 family transposase | - |
| RG71_RS26595 () | 865755..866608 | - | 854 | Protein_842 | IS5 family transposase | - |
| RG71_RS04765 () | 866941..867816 | + | 876 | WP_054626057.1 | GTPase family protein | - |
| RG71_RS04770 () | 868030..868737 | + | 708 | WP_023563912.1 | WYL domain-containing protein | - |
| RG71_RS27585 () | 868742..868888 | + | 147 | WP_023563913.1 | hypothetical protein | - |
| RG71_RS04775 () | 868901..869116 | + | 216 | WP_041036768.1 | hypothetical protein | - |
| RG71_RS04780 () | 869230..869640 | + | 411 | WP_042851426.1 | hypothetical protein | - |
| RG71_RS26600 () | 869706..870644 | + | 939 | WP_023564414.1 | hypothetical protein | - |
| RG71_RS04790 () | 870733..871551 | + | 819 | WP_016236913.1 | DUF945 domain-containing protein | - |
| RG71_RS04800 () | 871819..872289 | + | 471 | WP_000131762.1 | antirestriction protein | - |
| RG71_RS04805 () | 872301..872780 | + | 480 | WP_000437750.1 | DNA repair protein RadC | - |
| RG71_RS04810 () | 872801..873022 | + | 222 | WP_000691981.1 | DUF987 domain-containing protein | - |
| RG71_RS04815 () | 873046..873405 | + | 360 | WP_000066236.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| RG71_RS04820 () | 873456..873833 | + | 378 | WP_001568519.1 | TA system toxin CbtA family protein | Toxin Detail |
| RG71_RS04825 () | 873830..874321 | + | 492 | WP_000777682.1 | hypothetical protein | - |
| RG71_RS04830 () | 874353..874556 | + | 204 | WP_000413747.1 | DUF957 domain-containing protein | - |
| RG71_RS04835 () | 874637..875482 | + | 846 | WP_016236912.1 | DUF4942 domain-containing protein | - |
| RG71_RS04845 () | 875824..876555 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| RG71_RS04850 () | 876620..877087 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| RG71_RS04855 () | 877084..877806 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| RG71_RS04860 () | 877840..878595 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| RG71_RS04865 () | 878667..880025 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| RG71_RS04870 () | 880073..880669 | - | 597 | Protein_863 | methyltransferase domain-containing protein | - |
| RG71_RS04875 () | 880700..881500 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| RG71_RS04880 () | 881741..882655 | + | 915 | WP_000648572.1 | LysR family transcriptional regulator | - |
| RG71_RS04885 () | 882652..883455 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|