MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 138950 bp
Accession: NZ_CP010207 Location: 1..138950 Organism: Escherichia coli strain M11 Replicon: plasmid A
Accession: NZ_CP010207 Location: 1..138950 Organism: Escherichia coli strain M11 Replicon: plasmid A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG60_RS26245 () | 185..391 | + | 207 | WP_073519933.1 | hypothetical protein | - |
| RG60_RS29125 () | 655..771 | - | 117 | Protein_1 | IS21 family transposase | - |
| RG60_RS26250 () | 911..1795 | + | 885 | WP_034173833.1 | alpha/beta hydrolase | - |
| RG60_RS26255 () | 1820..2548 | - | 729 | WP_034173832.1 | transcriptional regulator NanR | - |
| RG60_RS26260 () | 2618..3703 | + | 1086 | WP_077897982.1 | hypothetical protein | - |
| RG60_RS26265 () | 3840..4739 | + | 900 | WP_073519990.1 | N-acetylneuraminate lyase | - |
| RG60_RS26270 () | 4799..5674 | + | 876 | WP_073519989.1 | N-acetylmannosamine kinase | - |
| RG60_RS26275 () | 5745..7211 | + | 1467 | WP_073519932.1 | MFS transporter | - |
| RG60_RS26280 () | 7227..8036 | + | 810 | WP_073519931.1 | alpha/beta hydrolase | - |
| RG60_RS26285 () | 8090..8800 | + | 711 | WP_073519930.1 | N-acetylneuraminic acid channel protein | - |
| RG60_RS26290 () | 8810..9919 | + | 1110 | WP_073519929.1 | N-acetylneuraminate epimerase | - |
| RG60_RS29130 () | 10089..10362 | + | 274 | Protein_11 | hypothetical protein | - |
| RG60_RS26295 () | 10440..10661 | - | 222 | Protein_12 | IS1 family transposase IS1N | Transposase |
| RG60_RS26300 () | 10660..10848 | - | 189 | Protein_13 | transposase | - |
| RG60_RS26305 () | 10839..10949 | + | 111 | WP_073519988.1 | conjugal transfer protein TraI | - |
| RG60_RS26310 () | 11252..11824 | + | 573 | WP_073519927.1 | hypothetical protein | - |
| RG60_RS26315 () | 11858..13078 | + | 1221 | WP_073519926.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| RG60_RS26320 () | 13080..15233 | + | 2154 | WP_073519925.1 | peptidase domain-containing ABC transporter | - |
| RG60_RS26325 () | 15277..16011 | + | 735 | WP_073519924.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| RG60_RS26330 () | 16066..16626 | + | 561 | Protein_19 | fertility inhibition protein FinO | - |
| RG60_RS26335 () | 16760..16972 | + | 213 | WP_032334799.1 | hypothetical protein | - |
| RG60_RS26340 () | 17215..17675 | + | 461 | Protein_21 | thermonuclease family protein | - |
| RG60_RS26345 () | 17721..17930 | + | 210 | WP_032334801.1 | hemolysin expression modulator Hha | - |
| RG60_RS26350 () | 17968..18558 | + | 591 | WP_032334802.1 | DUF2726 domain-containing protein | - |
| RG60_RS26355 () | 18538..18780 | - | 243 | WP_071996372.1 | hypothetical protein | - |
| - () | 18731..18787 | - | 57 | NuclAT_1 | - | - |
| - () | 18731..18787 | - | 57 | NuclAT_1 | - | - |
| - () | 18731..18787 | - | 57 | NuclAT_1 | - | - |
| - () | 18731..18787 | - | 57 | NuclAT_1 | - | - |
| RG60_RS26360 () | 18836..18985 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | - |
| RG60_RS26365 () | 19186..19443 | + | 258 | WP_073519922.1 | replication regulatory protein RepA | - |
| RG60_RS26370 () | 19460..19608 | - | 149 | Protein_27 | replication protein RepA | - |
| RG60_RS26375 () | 19675..19749 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| RG60_RS26380 () | 19742..20570 | + | 829 | Protein_29 | incFII family plasmid replication initiator RepA | - |
| RG60_RS26385 () | 20932..21126 | + | 195 | WP_073519921.1 | replication protein | - |
| RG60_RS26390 () | 21142..21273 | - | 132 | WP_071595370.1 | replication protein RepA4 | - |
| RG60_RS26400 () | 21485..21754 | + | 270 | WP_073519918.1 | hypothetical protein | Antitoxin Detail |
| RG60_RS26405 () | 21751..21966 | + | 216 | WP_073519917.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RG60_RS26410 () | 22118..22423 | + | 306 | WP_073521420.1 | hypothetical protein | - |
| RG60_RS26415 () | 22420..22692 | - | 273 | WP_046201741.1 | hypothetical protein | - |
| RG60_RS26420 () | 22685..23224 | - | 540 | WP_077897976.1 | recombinase family protein | - |
| RG60_RS29135 () | 23382..23465 | + | 84 | Protein_37 | maturase | - |
| RG60_RS29140 () | 23699..24061 | + | 363 | WP_071597330.1 | hypothetical protein | - |
| RG60_RS26430 () | 24086..24286 | + | 201 | WP_073519915.1 | hypothetical protein | - |
| RG60_RS26435 () | 24291..24926 | + | 636 | WP_073519914.1 | CPBP family intramembrane metalloprotease | - |
| RG60_RS26440 () | 25029..26282 | + | 1254 | WP_073519913.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| RG60_RS26445 () | 26282..28471 | + | 2190 | WP_073519912.1 | peptidase domain-containing ABC transporter | - |
| RG60_RS28445 () | 28632..28778 | + | 147 | Protein_43 | 3'-5' exonuclease | - |
| RG60_RS26455 () | 28983..32030 | - | 3048 | Protein_44 | Tn3 family transposase ISPsy42 | Transposase |
| RG60_RS26460 () | 32180..32758 | + | 579 | WP_001400936.1 | Tn3 family transposase ISPsy39 | Transposase |
| RG60_RS26465 () | 32751..33023 | + | 273 | WP_046201741.1 | hypothetical protein | - |
| RG60_RS26470 () | 33061..33255 | - | 195 | Protein_47 | hypothetical protein | - |
| RG60_RS28450 () | 33668..34044 | - | 377 | Protein_48 | hypothetical protein | - |
| RG60_RS26475 () | 33940..34359 | + | 420 | WP_073519911.1 | Exc2 family lipoprotein | - |
| RG60_RS26480 () | 34729..35082 | + | 354 | WP_077897977.1 | hypothetical protein | - |
| RG60_RS26485 () | 35094..35492 | + | 399 | WP_073519910.1 | hypothetical protein | - |
| RG60_RS29145 () | 35704..35850 | - | 147 | Protein_52 | 3'-5' exonuclease | - |
| RG60_RS26495 () | 35926..36500 | - | 575 | Protein_53 | IS481 family transposase ISErsp1 | Transposase |
| RG60_RS26500 () | 36584..36769 | - | 186 | WP_077897978.1 | LacI family transcriptional regulator | - |
| RG60_RS26505 () | 36803..37216 | - | 414 | WP_077897979.1 | GntR family transcriptional regulator | - |
| RG60_RS26510 () | 37973..42076 | + | 4104 | WP_073519907.1 | Serine protease pic autotransporter | VF |
| RG60_RS29150 () | 42318..43394 | + | 1077 | Protein_57 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| RG60_RS29155 () | 43416..44609 | + | 1194 | WP_095374788.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| RG60_RS26520 () | 44834..45472 | - | 639 | WP_073519905.1 | ParB N-terminal domain-containing protein | - |
| RG60_RS26525 () | 45457..46689 | - | 1233 | WP_073519904.1 | phosphoadenosine phosphosulfate reductase | - |
| RG60_RS28455 () | 47213..47426 | + | 214 | Protein_61 | IS1 family transposase | - |
| RG60_RS28460 () | 47575..48332 | + | 758 | Protein_62 | IS3 family transposase | - |
| RG60_RS28465 () | 48364..48627 | - | 264 | WP_077897983.1 | HNH endonuclease | - |
| RG60_RS26550 () | 48680..49727 | + | 1048 | Protein_64 | IS21 family transposase IS100kyp | Transposase |
| RG60_RS26555 () | 49817..50468 | + | 652 | Protein_65 | IS21 family transposase IS100kyp | Transposase |
| RG60_RS26560 () | 50542..51051 | - | 510 | Protein_66 | HNH endonuclease | - |
| RG60_RS29160 () | 51174..51414 | - | 241 | Protein_67 | IS91 family transposase | - |
| RG60_RS29165 () | 51506..51712 | - | 207 | WP_149025693.1 | hypothetical protein | - |
| RG60_RS26570 () | 52200..52499 | + | 300 | WP_073519900.1 | Major pilu subunit operon regulatory protein PapB | VF |
| RG60_RS26575 () | 52507..53049 | + | 543 | WP_073519899.1 | hypothetical protein | VF |
| RG60_RS26580 () | 53082..55508 | + | 2427 | WP_077897984.1 | Outer membrane usher protein YraJ | VF |
| RG60_RS26585 () | 55501..56277 | + | 777 | WP_073519897.1 | Chaperone protein FaeE | VF |
| RG60_RS26590 () | 56312..56803 | + | 492 | WP_073519896.1 | hypothetical protein | VF |
| RG60_RS26595 () | 57025..57822 | + | 798 | WP_073519895.1 | hypothetical protein | - |
| RG60_RS26600 () | 58020..58817 | + | 798 | WP_073519894.1 | hypothetical protein | VF |
| RG60_RS26605 () | 58847..59611 | + | 765 | WP_073519893.1 | hypothetical protein | VF |
| RG60_RS26610 () | 59628..60389 | + | 762 | WP_073519892.1 | hypothetical protein | VF |
| RG60_RS26615 () | 60631..60915 | - | 285 | WP_077897980.1 | Major pilu subunit operon regulatory protein PapB | VF |
| RG60_RS26620 () | 60999..64928 | - | 3930 | WP_073519890.1 | Serine protease EspC | VF |
| RG60_RS26630 () | 65850..66275 | + | 426 | Protein_80 | IS3 family transposase ISEc16 | Transposase |
| RG60_RS26635 () | 66289..66492 | - | 204 | WP_141221903.1 | hypothetical protein | - |
| RG60_RS28470 () | 66551..67550 | + | 1000 | Protein_82 | colicin transporter | - |
| RG60_RS26650 () | 67547..67744 | + | 198 | WP_049035580.1 | hypothetical protein | - |
| RG60_RS26655 () | 67880..68149 | + | 270 | Protein_84 | transcriptional regulator | - |
| RG60_RS29170 () | 68485..68591 | + | 107 | Protein_85 | IS110 family transposase | - |
| RG60_RS26660 () | 68593..68802 | + | 210 | Protein_86 | hypothetical protein | - |
| RG60_RS26665 () | 69055..69903 | - | 849 | WP_073519985.1 | hypothetical protein | - |
| RG60_RS26670 () | 69976..70223 | - | 248 | Protein_88 | hypothetical protein | - |
| RG60_RS26675 () | 70585..70731 | + | 147 | WP_073519886.1 | serine/threonine protein kinase | - |
| RG60_RS26680 () | 70894..71634 | + | 741 | WP_073519885.1 | site-specific integrase | - |
| RG60_RS26685 () | 71919..72896 | - | 978 | WP_000361618.1 | RepB family plasmid replication initiator protein | - |
| RG60_RS29175 () | 73546..73826 | - | 281 | Protein_92 | IS3 family transposase ISKpn37 | Transposase |
| RG60_RS26705 () | 73825..74112 | - | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RG60_RS26710 () | 74109..74360 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| RG60_RS29180 () | 74350..74556 | + | 207 | WP_073519883.1 | hypothetical protein | - |
| RG60_RS26715 () | 74525..74737 | - | 213 | WP_032334873.1 | hypothetical protein | - |
| RG60_RS26720 () | 74727..74912 | + | 186 | WP_073519882.1 | hypothetical protein | - |
| RG60_RS26725 () | 75111..76316 | + | 1206 | WP_000817644.1 | Plasmid partition protein A | VF |
| RG60_RS26730 () | 76313..77275 | + | 963 | WP_000756325.1 | ParB/RepB/Spo0J family partition protein | - |
| RG60_RS28475 () | 77509..78265 | + | 757 | Protein_100 | IS4 family transposase ISEc13 | Transposase |
| RG60_RS26745 () | 78387..78455 | - | 69 | Protein_101 | DUF4113 domain-containing protein | - |
| RG60_RS29185 () | 78887..78991 | + | 105 | Protein_102 | aerotaxis sensor receptor, flavoprotein | - |
| RG60_RS26760 () | 79194..80339 | + | 1146 | WP_073519881.1 | IS21 family transposase IS21 | Transposase |
| RG60_RS26765 () | 80339..80887 | + | 549 | Protein_104 | IS21 family transposase IS21 | Transposase |
| RG60_RS26770 () | 80968..81156 | - | 189 | WP_001332845.1 | hypothetical protein | - |
| RG60_RS26775 () | 81199..82971 | + | 1773 | WP_073519780.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| RG60_RS26780 () | 82984..92109 | + | 9126 | Protein_107 | tRNA nuclease CdiA | VF |
| RG60_RS26785 () | 92997..93212 | + | 216 | WP_065682930.1 | hypothetical protein | - |
| RG60_RS26790 () | 93273..94028 | + | 756 | Protein_109 | hypothetical protein | - |
| RG60_RS26795 () | 94021..94440 | + | 420 | Protein_110 | IS110 family transposase | - |
| RG60_RS26800 () | 94468..94794 | - | 327 | Protein_111 | hypothetical protein | - |
| RG60_RS26805 () | 94794..95231 | - | 438 | WP_073519984.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| RG60_RS26810 () | 95228..95476 | - | 249 | WP_073519983.1 | DinI-like family protein | - |
| RG60_RS26815 () | 95587..95856 | + | 270 | WP_032072581.1 | hypothetical protein | - |
| RG60_RS26820 () | 95870..96766 | + | 897 | WP_106423823.1 | DUF1281 domain-containing protein | - |
| RG60_RS29190 () | 96759..96842 | + | 84 | Protein_116 | hypothetical protein | - |
| RG60_RS26825 () | 97081..98007 | + | 927 | WP_073519982.1 | hypothetical protein | - |
| RG60_RS26830 () | 98132..99004 | - | 873 | WP_073519981.1 | HTH-type transcriptional regulator MetR | VF |
| RG60_RS26835 () | 99129..99836 | + | 708 | WP_073519980.1 | AzlC family ABC transporter permease | - |
| RG60_RS26840 () | 99833..100141 | + | 309 | WP_073519979.1 | AzlD domain-containing protein | - |
| RG60_RS26845 () | 100184..100879 | + | 696 | WP_073519978.1 | alpha/beta hydrolase | - |
| RG60_RS28485 () | 100982..101954 | - | 973 | Protein_122 | IS110 family transposase ISOt5 | Transposase |
| RG60_RS26860 () | 102533..103009 | + | 477 | Protein_123 | antirestriction protein ArdA | - |
| RG60_RS26865 () | 103449..103709 | + | 261 | WP_073519976.1 | DNA polymerase III subunit theta | - |
| RG60_RS29195 () | 103837..104058 | - | 222 | WP_123006580.1 | hypothetical protein | - |
| RG60_RS29200 () | 104271..104360 | + | 90 | WP_072223070.1 | single-stranded DNA-binding protein | - |
| RG60_RS26870 () | 104392..104949 | + | 558 | WP_073519975.1 | single-stranded DNA-binding protein | - |
| RG60_RS26875 () | 105001..105243 | + | 243 | WP_073519974.1 | DUF905 domain-containing protein | - |
| RG60_RS26880 () | 105313..107310 | + | 1998 | WP_073519973.1 | ParB/RepB/Spo0J family partition protein | - |
| RG60_RS26885 () | 107351..107785 | + | 435 | WP_097455818.1 | conjugation system SOS inhibitor PsiB | - |
| RG60_RS26890 () | 107782..108511 | + | 730 | Protein_131 | plasmid SOS inhibition protein A | - |
| RG60_RS26895 () | 108508..108822 | + | 315 | WP_073519971.1 | theronine dehydrogenase | - |
| - () | 108802..108979 | + | 178 | NuclAT_0 | - | - |
| - () | 108802..108979 | + | 178 | NuclAT_0 | - | - |
| - () | 108802..108979 | + | 178 | NuclAT_0 | - | - |
| - () | 108802..108979 | + | 178 | NuclAT_0 | - | - |
| RG60_RS26900 () | 108803..108954 | - | 152 | Protein_133 | protein sok | - |
| RG60_RS26905 () | 109032..109193 | + | 162 | WP_073519970.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| RG60_RS28490 () | 109301..109741 | + | 441 | WP_149025694.1 | hypothetical protein | - |
| RG60_RS29205 () | 109926..110337 | - | 412 | Protein_136 | hypothetical protein | - |
| RG60_RS29210 () | 110374..110583 | - | 210 | Protein_137 | hypothetical protein | - |
| RG60_RS26920 () | 110515..110644 | + | 130 | Protein_138 | single-stranded DNA-binding protein | - |
| RG60_RS26925 () | 110634..110978 | + | 345 | WP_073519969.1 | hypothetical protein | - |
| RG60_RS26930 () | 111122..111943 | + | 822 | WP_073519968.1 | DUF945 domain-containing protein | - |
| RG60_RS26935 () | 112239..112748 | - | 510 | WP_073519994.1 | hypothetical protein | VF |
| RG60_RS26940 () | 113172..113558 | + | 387 | WP_073519967.1 | relaxosome protein TraM | - |
| RG60_RS26945 () | 113747..114169 | + | 423 | WP_073519966.1 | PAS domain-containing protein | - |
| RG60_RS26950 () | 114526..114753 | + | 228 | WP_073519965.1 | conjugal transfer relaxosome protein TraY | - |
| RG60_RS26955 () | 114787..115146 | + | 360 | WP_073519964.1 | type IV conjugative transfer system pilin TraA | - |
| RG60_RS26960 () | 115161..115472 | + | 312 | WP_073519963.1 | type IV conjugative transfer system protein TraL | - |
| RG60_RS26965 () | 115494..116060 | + | 567 | WP_073519962.1 | type IV conjugative transfer system protein TraE | - |
| RG60_RS26970 () | 116071..116778 | + | 708 | WP_149025695.1 | type-F conjugative transfer system secretin TraK | - |
| RG60_RS26975 () | 116778..118226 | + | 1449 | WP_073519960.1 | conjugal transfer protein TraB | - |
| RG60_RS26980 () | 118195..118779 | + | 585 | WP_073519959.1 | conjugal transfer protein TraP | - |
| RG60_RS26985 () | 118733..119086 | + | 354 | WP_077897972.1 | conjugal transfer protein TrbD | - |
| RG60_RS26990 () | 119083..119598 | + | 516 | WP_073519958.1 | type IV conjugative transfer system lipoprotein TraV | - |
| RG60_RS26995 () | 119733..119954 | + | 222 | WP_073519957.1 | conjugal transfer protein TraR | - |
| RG60_RS27000 () | 119947..120423 | + | 477 | WP_073519956.1 | hypothetical protein | - |
| RG60_RS27005 () | 120420..120890 | + | 471 | WP_073519955.1 | hypothetical protein | - |
| RG60_RS27010 () | 120887..121282 | + | 396 | WP_073519954.1 | hypothetical protein | - |
| RG60_RS27015 () | 121300..123927 | + | 2628 | WP_073519953.1 | type IV secretion system protein TraC | - |
| RG60_RS27020 () | 123924..124310 | + | 387 | WP_073519952.1 | type-F conjugative transfer system protein TrbI | - |
| RG60_RS27025 () | 124307..124939 | + | 633 | WP_073519951.1 | type-F conjugative transfer system protein TraW | - |
| RG60_RS27030 () | 124936..125928 | + | 993 | WP_073519950.1 | conjugal transfer pilus assembly protein TraU | - |
| RG60_RS27035 () | 125937..126575 | + | 639 | WP_073519949.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| RG60_RS27040 () | 126572..126952 | + | 381 | WP_073519948.1 | hypothetical protein | - |
| RG60_RS27045 () | 127200..129071 | + | 1872 | WP_097455820.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| RG60_RS27050 () | 129083..129550 | + | 468 | WP_073519947.1 | hypothetical protein | - |
| RG60_RS27055 () | 129561..130304 | + | 744 | WP_073519946.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| RG60_RS27060 () | 130318..130683 | + | 366 | WP_073519945.1 | hypothetical protein | - |
| RG60_RS27065 () | 130644..130979 | - | 336 | WP_073519944.1 | hypothetical protein | - |
| RG60_RS27070 () | 131069..131356 | + | 288 | WP_073519943.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| RG60_RS27075 () | 131337..131891 | + | 555 | WP_073519942.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| RG60_RS27080 () | 131904..132395 | + | 492 | WP_073519941.1 | hypothetical protein | - |
| RG60_RS27090 () | 132800..134218 | + | 1419 | WP_073519939.1 | conjugal transfer protein TraH | - |
| RG60_RS27095 () | 134215..137067 | + | 2853 | WP_073519938.1 | conjugal transfer mating pair stabilization protein TraG | - |
| RG60_RS27100 () | 137088..137585 | + | 498 | WP_073519937.1 | surface exclusion protein | - |
| RG60_RS27105 () | 137617..138348 | + | 732 | WP_123006582.1 | complement resistance protein TraT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|