MGE detailed information
MGE type: Genomic_island MGE length: 15961 bp
Accession: NZ_CP010152 Location: 814981..830941 Organism: Escherichia coli strain D9 Replicon: chromosome
Accession: NZ_CP010152 Location: 814981..830941 Organism: Escherichia coli strain D9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG42_RS04165 () | 814158..814550 | + | 393 | WP_001101839.1 | hypothetical protein | - |
| RG42_RS04170 () | 814981..816117 | + | 1137 | Protein_725 | ISAs1 family transposase ISEc1 | Transposase |
| RG42_RS04175 () | 816158..816928 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| RG42_RS04180 () | 817109..817555 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| RG42_RS04185 () | 817598..820042 | - | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| RG42_RS04190 () | 820282..820860 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| RG42_RS04195 () | 821066..821833 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| RG42_RS04200 () | 821804..822544 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| RG42_RS04205 () | 822700..822978 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| RG42_RS04210 () | 822981..823241 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| RG42_RS04215 () | 823451..824200 | + | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| RG42_RS04220 () | 824376..824873 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| RG42_RS04230 () | 825097..826809 | - | 1713 | Protein_736 | Flagellar biosynthesis protein FlhA | VF |
| RG42_RS04235 () | 826781..827566 | + | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| RG42_RS04240 () | 827637..828692 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| RG42_RS04245 () | 828744..829037 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| RG42_RS04250 () | 829040..829438 | + | 399 | WP_001263488.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| RG42_RS04255 () | 829448..829900 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| RG42_RS04265 () | 830218..830424 | + | 207 | Protein_742 | RtcB family protein | - |
| RG42_RS04270 () | 830420..830941 | + | 522 | Protein_743 | peptide chain release factor H | - |
| RG42_RS04275 () | 830998..832455 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| RG42_RS04280 () | 832716..833174 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| RG42_RS04285 () | 833266..834510 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 833770..833850 | + | 81 | NuclAT_12 | - | - |
| - () | 833770..833850 | + | 81 | NuclAT_12 | - | - |
| - () | 833770..833850 | + | 81 | NuclAT_12 | - | - |
| - () | 833770..833850 | + | 81 | NuclAT_12 | - | - |
| RG42_RS04290 () | 834568..834969 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA28996, TA28997 | NC_020518 | 223678..243064 | 0.008 |