MGE detailed information
MGE type: Prophage MGE length: 75407 bp
Accession: NZ_CP009685 Location: 3398438..3473844 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_CP009685 Location: 3398438..3473844 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EO53_RS16865 () | 3393572..3394528 | + | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| EO53_RS16870 () | 3394525..3396723 | + | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| EO53_RS16875 () | 3396733..3397689 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| EO53_RS16880 () | 3397740..3398078 | + | 339 | Protein_3214 | LysR family transcriptional regulator | - |
| EO53_RS16890 () | 3398363..3399763 | + | 1401 | WP_001407714.1 | hypothetical protein ; Integrase | Integrase |
| EO53_RS16895 () | 3399880..3400320 | + | 441 | WP_000224818.1 | hypothetical protein | - |
| EO53_RS16900 () | 3400317..3400541 | + | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| EO53_RS16905 () | 3400660..3401514 | + | 855 | WP_000072039.1 | hypothetical protein | - |
| EO53_RS16910 () | 3401541..3402239 | + | 699 | WP_001214248.1 | recombinase family protein | - |
| EO53_RS16915 () | 3402511..3403137 | + | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| EO53_RS16920 () | 3403228..3404058 | - | 831 | Protein_3221 | type III restriction endonuclease subunit R | - |
| EO53_RS16925 () | 3404113..3404810 | + | 698 | Protein_3222 | IS1 family transposase IS1R | Transposase |
| EO53_RS24465 () | 3404827..3405030 | - | 204 | Protein_3223 | DUF3987 domain-containing protein | - |
| EO53_RS16930 () | 3405154..3406158 | + | 1005 | WP_001281825.1 | hypothetical protein | VF |
| EO53_RS16935 () | 3406297..3407055 | + | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| EO53_RS16940 () | 3407060..3408670 | - | 1611 | WP_000406871.1 | glycoside hydrolase family 43 protein | - |
| EO53_RS16945 () | 3408682..3410064 | - | 1383 | WP_000192863.1 | MFS transporter | - |
| EO53_RS16950 () | 3410291..3412258 | - | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| EO53_RS16955 () | 3412273..3413181 | - | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| EO53_RS16960 () | 3413476..3414630 | + | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| EO53_RS16965 () | 3414724..3415074 | + | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| EO53_RS16970 () | 3415097..3415345 | + | 249 | Protein_3232 | IS3 family transposase ISEhe3 | Transposase |
| EO53_RS24470 () | 3415355..3415528 | - | 174 | Protein_3233 | IS30 family transposase | - |
| EO53_RS16975 () | 3415584..3416281 | + | 698 | Protein_3234 | IS1 family transposase IS1R | Transposase |
| EO53_RS16980 () | 3416298..3416645 | + | 348 | Protein_3235 | ABC transporter permease subunit | - |
| EO53_RS16985 () | 3416657..3417703 | + | 1047 | WP_000192349.1 | hypothetical protein | VF |
| EO53_RS16990 () | 3417812..3418744 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| EO53_RS16995 () | 3418731..3420134 | - | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| EO53_RS17000 () | 3420342..3421358 | + | 1017 | WP_010723085.1 | IS5 family transposase IS5D | Transposase |
| EO53_RS17005 () | 3421506..3422597 | - | 1092 | Protein_3240 | group II intron reverse transcriptase/maturase | - |
| EO53_RS17020 () | 3423270..3423695 | - | 426 | Protein_3241 | IS3 family transposase | - |
| EO53_RS17025 () | 3423705..3424856 | - | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| EO53_RS17030 () | 3424924..3425181 | - | 258 | Protein_3243 | IS3 family transposase ISEc52 | Transposase |
| EO53_RS17035 () | 3425277..3426170 | + | 894 | WP_000770246.1 | LysR family transcriptional regulator | - |
| EO53_RS17040 () | 3426499..3427362 | + | 864 | WP_001065553.1 | GTPase family protein | - |
| EO53_RS17045 () | 3427454..3428275 | + | 822 | WP_000197389.1 | DUF945 domain-containing protein | - |
| EO53_RS25875 () | 3428492..3428683 | + | 192 | Protein_3247 | DeoR family transcriptional regulator | - |
| EO53_RS25880 () | 3428679..3428906 | + | 228 | WP_001548158.1 | hypothetical protein | - |
| EO53_RS25885 () | 3428906..3429349 | + | 444 | WP_000824223.1 | hypothetical protein | - |
| EO53_RS17060 () | 3429372..3429839 | + | 468 | WP_001547765.1 | hypothetical protein | - |
| EO53_RS17065 () | 3429916..3430155 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| EO53_RS17070 () | 3430253..3430711 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| EO53_RS17075 () | 3430727..3431203 | + | 477 | WP_000811693.1 | RadC family protein | - |
| EO53_RS24500 () | 3431212..3431433 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| EO53_RS17080 () | 3431452..3431769 | + | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| EO53_RS17085 () | 3431790..3432131 | + | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| EO53_RS17095 () | 3432703..3433956 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| EO53_RS17100 () | 3433968..3435071 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| EO53_RS17105 () | 3435359..3436414 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| EO53_RS17110 () | 3436453..3436782 | - | 330 | Protein_3260 | sigma factor-binding protein Crl | - |
| EO53_RS17115 () | 3436839..3437536 | + | 698 | Protein_3261 | IS1 family transposase IS1A | Transposase |
| EO53_RS25890 () | 3437550..3437630 | - | 81 | Protein_3262 | sigma factor-binding protein Crl | - |
| EO53_RS17120 () | 3437688..3438932 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 3438348..3438428 | - | 81 | NuclAT_12 | - | - |
| - () | 3438348..3438428 | - | 81 | NuclAT_12 | - | - |
| - () | 3438348..3438428 | - | 81 | NuclAT_12 | - | - |
| - () | 3438348..3438428 | - | 81 | NuclAT_12 | - | - |
| EO53_RS17125 () | 3439024..3439482 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| EO53_RS17130 () | 3439743..3441199 | + | 1457 | Protein_3265 | cytosol nonspecific dipeptidase | - |
| EO53_RS17135 () | 3441256..3441777 | - | 522 | Protein_3266 | peptide chain release factor H | - |
| EO53_RS17140 () | 3441773..3441979 | - | 207 | Protein_3267 | RtcB family protein | - |
| EO53_RS17145 () | 3442297..3442749 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| EO53_RS17150 () | 3442759..3443157 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| EO53_RS17155 () | 3443160..3443453 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| EO53_RS17160 () | 3443505..3444560 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| EO53_RS17165 () | 3444631..3445416 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| EO53_RS17170 () | 3445388..3447100 | + | 1713 | Protein_3273 | hypothetical protein | VF |
| EO53_RS17175 () | 3447324..3447821 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| EO53_RS17180 () | 3447997..3448746 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| EO53_RS17185 () | 3448956..3449216 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| EO53_RS17190 () | 3449219..3449497 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| EO53_RS17195 () | 3449653..3450393 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| EO53_RS17200 () | 3450364..3451131 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| EO53_RS17205 () | 3451337..3451915 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| EO53_RS17210 () | 3452155..3454599 | + | 2445 | WP_000973083.1 | hypothetical protein | VF |
| EO53_RS17215 () | 3454642..3455088 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| EO53_RS17220 () | 3455269..3456039 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| EO53_RS25895 () | 3456080..3456358 | - | 279 | Protein_3284 | ISAs1 family transposase | - |
| EO53_RS17230 () | 3456356..3456712 | + | 357 | Protein_3285 | hypothetical protein | - |
| EO53_RS17235 () | 3456722..3457201 | + | 480 | WP_001236645.1 | hypothetical protein | - |
| EO53_RS17240 () | 3457338..3458123 | - | 786 | WP_001086141.1 | lipoprotein | - |
| EO53_RS17250 () | 3458660..3459391 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| EO53_RS17255 () | 3459456..3459923 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| EO53_RS17260 () | 3459920..3460642 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| EO53_RS17265 () | 3460676..3461431 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| EO53_RS17270 () | 3461503..3462861 | + | 1359 | WP_000644685.1 | hypothetical protein | VF |
| EO53_RS17275 () | 3462909..3463505 | - | 597 | Protein_3293 | methyltransferase domain-containing protein | - |
| EO53_RS17280 () | 3463536..3464336 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| EO53_RS17285 () | 3464577..3465491 | + | 915 | WP_000648572.1 | hypothetical protein | VF |
| EO53_RS17290 () | 3465488..3466291 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
| EO53_RS17325 () | 3472050..3472625 | - | 576 | WP_001140187.1 | hypothetical protein | VF |
| EO53_RS17330 () | 3472813..3473844 | + | 1032 | WP_000594006.1 | hypothetical protein | VF |
| EO53_RS17335 () | 3473837..3474490 | + | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| EO53_RS17340 () | 3474530..3475345 | + | 816 | WP_000874226.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| EO53_RS17345 () | 3475463..3475867 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| EO53_RS17350 () | 3475864..3476571 | + | 708 | WP_000094011.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| EO53_RS17355 () | 3476683..3478401 | + | 1719 | WP_001260717.1 | proline--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|