MGE detailed information
MGE type: Conjugative plasmid MGE length: 168318 bp
Accession: NZ_CP009105 Location: 1..168318 Organism: Escherichia coli strain RM9387 Replicon: plasmid pO104_H7
Accession: NZ_CP009105 Location: 1..168318 Organism: Escherichia coli strain RM9387 Replicon: plasmid pO104_H7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW42_RS28295 () | 484..1131 | - | 648 | Protein_1 | DNA methylase | - |
| HW42_RS28300 () | 1243..1557 | - | 315 | Protein_2 | hypothetical protein | - |
| HW42_RS28040 () | 1554..2452 | - | 899 | Protein_3 | DUF1281 domain-containing protein | - |
| HW42_RS24135 () | 2875..3123 | + | 249 | WP_000618108.1 | DinI-like family protein | - |
| HW42_RS24140 () | 3120..3557 | + | 438 | WP_040116933.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HW42_RS24145 () | 3557..4708 | + | 1152 | Protein_6 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HW42_RS24150 () | 4880..5506 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| HW42_RS28305 () | 5503..5805 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| HW42_RS24165 () | 6162..6413 | + | 252 | WP_031322317.1 | hypothetical protein | - |
| HW42_RS24170 () | 6413..7003 | + | 591 | WP_040116934.1 | hypothetical protein | - |
| HW42_RS24175 () | 7021..7368 | - | 348 | WP_040116935.1 | hypothetical protein | - |
| HW42_RS24180 () | 7497..7832 | + | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| HW42_RS24185 () | 7854..8189 | - | 336 | Protein_13 | colicin | - |
| HW42_RS24190 () | 8284..9015 | - | 732 | WP_000850413.1 | complement resistance protein TraT | - |
| HW42_RS28310 () | 9291..9401 | - | 111 | Protein_15 | IS481 family transposase | - |
| HW42_RS26830 () | 9405..9619 | - | 215 | Protein_16 | hypothetical protein | - |
| HW42_RS24200 () | 10185..11160 | + | 976 | Protein_17 | RepB family plasmid replication initiator protein | - |
| HW42_RS26840 () | 11399..11681 | - | 283 | Protein_18 | ISL3 family transposase ISEc53 | Transposase |
| HW42_RS27505 () | 11838..12064 | - | 227 | Protein_19 | serine/threonine protein kinase | - |
| HW42_RS24205 () | 12194..12688 | - | 495 | WP_000377258.1 | Transcriptional repressor MprA | VF |
| HW42_RS24210 () | 12809..14248 | - | 1440 | WP_021293303.1 | Hemolysin secretion protein D, chromosomal | VF |
| HW42_RS24215 () | 14252..16372 | - | 2121 | WP_072094473.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| HW42_RS24220 () | 16422..19418 | - | 2997 | WP_040116937.1 | Hemolysin, chromosomal | VF |
| HW42_RS24225 () | 19420..19935 | - | 516 | WP_001365635.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| HW42_RS24230 () | 20362..21165 | - | 804 | WP_000899428.1 | Outer membrane protein A | VF |
| HW42_RS24235 () | 21190..25455 | - | 4266 | WP_159454915.1 | Autotransporter adhesin SadA | VF |
| HW42_RS24240 () | 25507..25788 | - | 282 | WP_040116939.1 | Major pilu subunit operon regulatory protein PapB | VF |
| HW42_RS24245 () | 26895..28451 | + | 1557 | WP_040116940.1 | L-lactate permease | - |
| HW42_RS24250 () | 28502..29221 | + | 720 | WP_040116941.1 | (Fe-S)-binding protein | - |
| HW42_RS24255 () | 29232..30647 | + | 1416 | WP_040116942.1 | iron-sulfur cluster-binding protein | - |
| HW42_RS24260 () | 30652..31350 | + | 699 | WP_040116943.1 | lactate utilization protein C | - |
| HW42_RS24265 () | 31740..32165 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| HW42_RS24270 () | 32162..32512 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| HW42_RS24275 () | 32543..34156 | + | 1614 | WP_039264366.1 | IS66 family transposase ISEc23 | Transposase |
| HW42_RS24280 () | 34233..34673 | - | 441 | WP_052214797.1 | IS3 family transposase ISKpn8 | Transposase |
| HW42_RS24295 () | 36258..37640 | + | 1383 | WP_040116944.1 | Adhesin YadA | VF |
| HW42_RS27515 () | 37703..38889 | + | 1187 | Protein_38 | IS91 family transposase ISEc37 | Transposase |
| HW42_RS28060 () | 39323..39612 | + | 290 | Protein_39 | IS3 family transposase IS3F | Transposase |
| HW42_RS28065 () | 39816..39977 | + | 162 | Protein_40 | IS3 family transposase IS3F | Transposase |
| HW42_RS24330 () | 40302..42389 | + | 2088 | WP_040116947.1 | bifunctional siderophore receptor/adhesin Iha | - |
| HW42_RS24335 () | 42650..43072 | - | 423 | WP_001212725.1 | Exc2 family lipoprotein | - |
| HW42_RS27525 () | 43407..43589 | - | 183 | Protein_43 | IS110 family transposase | - |
| HW42_RS24340 () | 43651..43839 | + | 189 | Protein_44 | IS66 family transposase ISEc47 | Transposase |
| HW42_RS26870 () | 44123..44548 | - | 426 | WP_001373081.1 | subtilase AB5 cytotoxin subunit B | - |
| HW42_RS24350 () | 44565..45608 | - | 1044 | WP_000912970.1 | subtilase AB5 cytotoxin subunit A | - |
| HW42_RS24360 () | 45662..46626 | - | 965 | Protein_47 | IS66 family transposase IS682 | Transposase |
| HW42_RS24365 () | 46657..47005 | - | 349 | Protein_48 | IS66 family transposase IS682 | Transposase |
| HW42_RS24370 () | 47002..47427 | - | 426 | WP_000435654.1 | IS66 family transposase IS682 | Transposase |
| HW42_RS26875 () | 47732..47917 | - | 186 | WP_071531845.1 | hypothetical protein | - |
| HW42_RS24375 () | 47917..49215 | - | 1299 | Protein_51 | VENN motif pre-toxin domain-containing protein | - |
| HW42_RS28075 () | 49471..49644 | + | 174 | Protein_52 | Tn3 family transposase | - |
| HW42_RS24380 () | 49841..50845 | + | 1005 | Protein_53 | IS110 family transposase IS4321 | Transposase |
| HW42_RS28315 () | 51345..51530 | - | 186 | WP_169124752.1 | hypothetical protein | - |
| HW42_RS24395 () | 52537..53743 | - | 1207 | Protein_55 | IS3 family transposase ISEc48 | Transposase |
| HW42_RS24410 () | 53819..54109 | - | 291 | WP_000421260.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HW42_RS24415 () | 54109..54393 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| HW42_RS24420 () | 55017..55208 | - | 192 | WP_001027503.1 | hypothetical protein | - |
| HW42_RS28325 () | 55260..55454 | - | 195 | WP_159454916.1 | hypothetical protein | - |
| HW42_RS24430 () | 56536..56913 | + | 378 | WP_040116951.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HW42_RS24435 () | 56913..58186 | + | 1274 | Protein_61 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HW42_RS24440 () | 58188..58604 | - | 417 | WP_040116952.1 | plasmid partitioning/stability family protein | - |
| HW42_RS24445 () | 58597..59577 | - | 981 | WP_000688510.1 | plasmid segregation protein ParM | - |
| HW42_RS24450 () | 59984..60292 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| HW42_RS24455 () | 60379..61023 | - | 645 | WP_001144036.1 | ParA family protein | - |
| HW42_RS24460 () | 61205..62011 | - | 807 | WP_040116953.1 | site-specific integrase | - |
| HW42_RS24465 () | 62012..62317 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HW42_RS24470 () | 62319..62537 | - | 219 | WP_038355956.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HW42_RS24480 () | 63132..63389 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| HW42_RS24485 () | 63389..63979 | + | 591 | WP_000194574.1 | hypothetical protein | - |
| HW42_RS26910 () | 63999..64342 | - | 344 | Protein_71 | hypothetical protein | - |
| HW42_RS24490 () | 64461..64808 | + | 348 | WP_000762580.1 | hypothetical protein | - |
| HW42_RS24495 () | 64826..66706 | - | 1881 | WP_001283354.1 | colicin | - |
| HW42_RS27540 () | 66985..67650 | - | 666 | WP_000448923.1 | hypothetical protein | - |
| HW42_RS24505 () | 67673..67882 | - | 210 | Protein_75 | IS21 family transposase IS21 | Transposase |
| HW42_RS24515 () | 68379..70352 | + | 1974 | WP_024199761.1 | Hemin receptor | VF |
| HW42_RS26915 () | 70371..70526 | + | 156 | Protein_77 | DUF4198 domain-containing protein | - |
| HW42_RS24520 () | 70612..71037 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| HW42_RS24525 () | 71034..71384 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| HW42_RS24530 () | 71415..73028 | + | 1614 | WP_039264366.1 | IS66 family transposase ISEc23 | Transposase |
| HW42_RS24535 () | 73357..73998 | - | 642 | Protein_81 | DUF4198 domain-containing protein | - |
| HW42_RS24540 () | 74031..75644 | - | 1614 | WP_039264366.1 | IS66 family transposase ISEc23 | Transposase |
| HW42_RS24545 () | 75675..76025 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| HW42_RS24550 () | 76022..76447 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| HW42_RS24555 () | 76682..77332 | + | 651 | WP_040116954.1 | IS66 family transposase IS679 | Transposase |
| HW42_RS24560 () | 77332..77679 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| HW42_RS24565 () | 77699..79270 | + | 1572 | WP_040116955.1 | IS66 family transposase ISCro1 | Transposase |
| HW42_RS28095 () | 79488..79724 | + | 237 | WP_040116956.1 | colicin V immunity protein | - |
| HW42_RS24575 () | 79941..80258 | + | 318 | WP_032144652.1 | colicin V family bacteriocin | - |
| HW42_RS24580 () | 80445..82559 | - | 2115 | WP_123129447.1 | peptidase domain-containing ABC transporter | - |
| HW42_RS24585 () | 82534..83808 | - | 1275 | WP_024192804.1 | HlyD family secretion protein | - |
| HW42_RS28100 () | 84219..84305 | + | 87 | Protein_92 | colicin-Ia domain protein | - |
| HW42_RS24590 () | 84454..84711 | + | 258 | WP_040116958.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HW42_RS24595 () | 84680..85045 | + | 366 | WP_148307810.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HW42_RS24600 () | 85423..85704 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HW42_RS24605 () | 85701..85970 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| HW42_RS24615 () | 86880..87911 | - | 1032 | WP_040116960.1 | replication initiation protein | - |
| HW42_RS24620 () | 88613..89254 | + | 642 | WP_077784641.1 | transcription termination factor NusG | - |
| HW42_RS24625 () | 89395..90060 | + | 666 | WP_001536608.1 | hypothetical protein | - |
| HW42_RS24630 () | 90327..90947 | + | 621 | WP_040116961.1 | DUF1449 family protein | - |
| HW42_RS24635 () | 90974..92668 | + | 1695 | WP_000482663.1 | flotillin family protein | - |
| HW42_RS26945 () | 92749..92991 | + | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| HW42_RS24640 () | 93108..93443 | + | 336 | WP_040116998.1 | hypothetical protein | - |
| HW42_RS24655 () | 94059..94946 | + | 888 | WP_040116964.1 | hypothetical protein | - |
| HW42_RS24660 () | 94939..95379 | - | 441 | WP_000468139.1 | hypothetical protein | - |
| HW42_RS24665 () | 95482..96549 | + | 1068 | WP_040116965.1 | hypothetical protein | VF |
| HW42_RS24670 () | 96554..96991 | + | 438 | WP_000539684.1 | type IV pilus biogenesis protein PilM | - |
| HW42_RS24675 () | 97022..98641 | + | 1620 | WP_001034998.1 | Outer membrane lipoprotein BfpB | VF |
| HW42_RS24680 () | 98662..99957 | + | 1296 | WP_033806466.1 | type 4b pilus protein PilO2 | - |
| HW42_RS24685 () | 99947..100399 | + | 453 | WP_040116966.1 | type IV pilus biogenesis protein PilP | - |
| HW42_RS24690 () | 100484..101992 | + | 1509 | WP_040116967.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HW42_RS24695 () | 101994..103094 | + | 1101 | WP_001563249.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HW42_RS24700 () | 103168..103704 | + | 537 | WP_001011156.1 | cleavage protein | - |
| HW42_RS24705 () | 103758..104231 | + | 474 | WP_000870986.1 | hypothetical protein | VF |
| HW42_RS24710 () | 104250..104885 | + | 636 | WP_040116968.1 | prepilin peptidase | - |
| HW42_RS24715 () | 104890..106254 | + | 1365 | WP_021531785.1 | hypothetical protein | VF |
| HW42_RS24720 () | 106712..107002 | + | 291 | WP_000681898.1 | hypothetical protein | - |
| HW42_RS24725 () | 107094..107414 | - | 321 | WP_000695052.1 | hypothetical protein | - |
| HW42_RS24730 () | 107674..108495 | + | 822 | WP_000804089.1 | hypothetical protein | - |
| HW42_RS24735 () | 108585..109787 | + | 1203 | WP_000980151.1 | conjugal transfer protein TraF | - |
| HW42_RS28330 () | 109927..110097 | + | 171 | WP_000482367.1 | hypothetical protein | - |
| HW42_RS24740 () | 110146..110598 | + | 453 | WP_001081199.1 | DotD/TraH family lipoprotein | - |
| HW42_RS24745 () | 110595..111431 | + | 837 | WP_040116969.1 | hypothetical protein | VF |
| HW42_RS24750 () | 111415..112563 | + | 1149 | WP_040116970.1 | putative protein YggR | VF |
| HW42_RS24755 () | 112560..112850 | + | 291 | WP_040116971.1 | hypothetical protein | - |
| HW42_RS24760 () | 112914..116930 | + | 4017 | WP_040116972.1 | DNA primase | - |
| HW42_RS24765 () | 116947..117297 | + | 351 | WP_001056369.1 | hypothetical protein | - |
| HW42_RS24770 () | 117309..118004 | + | 696 | WP_001287261.1 | DotI/IcmL family type IV secretion protein | - |
| HW42_RS24775 () | 118015..118989 | + | 975 | WP_040116973.1 | hypothetical protein | VF |
| HW42_RS24780 () | 118993..120324 | + | 1332 | WP_040116974.1 | conjugal transfer protein TraO | - |
| HW42_RS24785 () | 120321..121034 | + | 714 | WP_000787009.1 | conjugal transfer protein TraP | - |
| HW42_RS24790 () | 121034..121561 | + | 528 | WP_040116999.1 | conjugal transfer protein TraQ | - |
| HW42_RS24795 () | 121608..122006 | + | 399 | WP_040116975.1 | hypothetical protein | - |
| HW42_RS24800 () | 122063..122314 | + | 252 | WP_001277575.1 | hypothetical protein | - |
| HW42_RS24805 () | 122229..123047 | + | 819 | WP_072121450.1 | conjugal transfer protein TraT | - |
| HW42_RS24810 () | 123102..123461 | + | 360 | WP_000380400.1 | hypothetical protein | - |
| HW42_RS24815 () | 123461..123841 | + | 381 | WP_000690886.1 | hypothetical protein | - |
| HW42_RS24820 () | 124017..127061 | + | 3045 | WP_032326940.1 | conjugal transfer protein | - |
| HW42_RS24825 () | 127061..127678 | + | 618 | WP_000286857.1 | hypothetical protein | - |
| HW42_RS24830 () | 127639..128844 | + | 1206 | WP_040116976.1 | conjugal transfer protein TraW | - |
| HW42_RS24835 () | 128841..129410 | + | 570 | WP_040116977.1 | conjugal transfer protein TraX | - |
| HW42_RS24840 () | 129483..131039 | + | 1557 | Protein_142 | DotA/TraY family protein | - |
| HW42_RS24850 () | 131104..132266 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
| HW42_RS24855 () | 132298..132909 | + | 612 | Protein_144 | DotA/TraY family protein | - |
| HW42_RS24860 () | 132980..133633 | + | 654 | WP_001098361.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HW42_RS24865 () | 133907..135493 | + | 1587 | WP_000004565.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| HW42_RS24870 () | 135631..135783 | - | 153 | WP_001597021.1 | Hok/Gef family protein | - |
| HW42_RS24875 () | 136116..136358 | + | 243 | WP_000064387.1 | hypothetical protein | - |
| HW42_RS24880 () | 136451..137986 | - | 1536 | WP_172686882.1 | phosphoethanolamine transferase | - |
| HW42_RS24885 () | 138186..138641 | - | 456 | WP_040116979.1 | DUF2569 family protein | - |
| HW42_RS24890 () | 138729..139352 | - | 624 | WP_040116980.1 | hypothetical protein | - |
| HW42_RS24895 () | 139511..140014 | + | 504 | WP_040116981.1 | thermonuclease family protein | - |
| HW42_RS24900 () | 140394..144293 | + | 3900 | WP_040116982.1 | Serine protease EspP | VF |
| HW42_RS26950 () | 144456..144665 | - | 210 | WP_071885013.1 | hypothetical protein | - |
| HW42_RS24910 () | 144799..145164 | + | 366 | WP_029365222.1 | hypothetical protein | - |
| HW42_RS24915 () | 145174..145365 | + | 192 | WP_000264909.1 | hypothetical protein | - |
| HW42_RS24920 () | 145396..145695 | + | 300 | WP_040116983.1 | hypothetical protein | - |
| HW42_RS24930 () | 146494..147765 | + | 1272 | WP_040116984.1 | IncI1-type conjugal transfer protein TrbA | - |
| HW42_RS24935 () | 147762..148880 | + | 1119 | WP_040116985.1 | DsbC family protein | - |
| HW42_RS24940 () | 148861..151161 | + | 2301 | WP_040116986.1 | TraM recognition domain-containing protein | - |
| HW42_RS24945 () | 151382..154102 | - | 2721 | WP_040116987.1 | Protein TraI | Relaxase |
| HW42_RS24950 () | 154114..154446 | - | 333 | WP_001291056.1 | hypothetical protein | - |
| HW42_RS24955 () | 154678..155013 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HW42_RS24960 () | 155098..155946 | - | 849 | WP_032331167.1 | DUF4942 domain-containing protein | - |
| HW42_RS24965 () | 156525..156776 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| HW42_RS24970 () | 156807..157052 | - | 246 | WP_012605149.1 | hypothetical protein | - |
| HW42_RS24975 () | 157052..157990 | - | 939 | WP_040116988.1 | Recombination-promoting nuclease RpnA | VF |
| HW42_RS24980 () | 158055..158321 | - | 267 | WP_001247860.1 | hypothetical protein | - |
| HW42_RS24985 () | 158413..158847 | - | 435 | WP_000218849.1 | hypothetical protein | - |
| HW42_RS28335 () | 159266..159424 | - | 159 | WP_179206415.1 | hypothetical protein | - |
| HW42_RS24995 () | 159449..159949 | - | 501 | WP_000117616.1 | antirestriction protein ArdA | - |
| HW42_RS25000 () | 160414..161010 | - | 597 | WP_040116989.1 | hypothetical protein | - |
| HW42_RS25005 () | 161007..161726 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| HW42_RS25010 () | 161723..162157 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| HW42_RS25015 () | 162212..164170 | - | 1959 | WP_040116990.1 | ParB/RepB/Spo0J family partition protein | - |
| HW42_RS25020 () | 164236..164469 | - | 234 | WP_040116991.1 | DUF905 family protein | - |
| HW42_RS25025 () | 164527..165054 | - | 528 | WP_040116992.1 | single-stranded DNA-binding protein | - |
| HW42_RS27565 () | 165491..165844 | - | 354 | WP_077630265.1 | hypothetical protein | - |
| HW42_RS25035 () | 165807..165998 | - | 192 | WP_001027518.1 | hypothetical protein | - |
| HW42_RS25040 () | 165998..166417 | - | 420 | WP_000271737.1 | DUF1380 family protein | - |
| HW42_RS25045 () | 166464..166766 | - | 303 | WP_001364029.1 | antirestriction protein | - |
| HW42_RS25055 () | 167304..168080 | - | 777 | WP_024177483.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|