MGE detailed information
MGE type: Mobilizable plasmid MGE length: 78111 bp
Accession: NZ_CP009053 Location: 1..78111 Organism: Escherichia coli NCCP15648 Replicon: plasmid p15648-3
Accession: NZ_CP009053 Location: 1..78111 Organism: Escherichia coli NCCP15648 Replicon: plasmid p15648-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A610_RS29360 () | 166..1143 | + | 978 | WP_001388581.1 | RepB family plasmid replication initiator protein | - |
| A610_RS29365 () | 1428..2168 | - | 741 | WP_001388582.1 | tyrosine-type recombinase/integrase | - |
| A610_RS29370 () | 2289..2471 | - | 183 | WP_048657295.1 | hypothetical protein | - |
| A610_RS29380 () | 2815..3122 | - | 308 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
| A610_RS29390 () | 3615..4783 | + | 1169 | Protein_4 | hypothetical protein | - |
| A610_RS29395 () | 4816..4944 | + | 129 | Protein_5 | IS481 family transposase | - |
| A610_RS29400 () | 4979..5272 | - | 294 | WP_001105065.1 | hypothetical protein | - |
| A610_RS29405 () | 5378..5653 | - | 276 | WP_000421273.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A610_RS29410 () | 5653..5937 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| A610_RS29425 () | 6854..7876 | - | 1023 | WP_000234918.1 | replication initiation protein | - |
| A610_RS29430 () | 7866..8399 | - | 534 | WP_001505108.1 | incFII RepA family protein | - |
| A610_RS29435 () | 8392..8466 | - | 75 | WP_001388587.1 | RepA leader peptide Tap | - |
| A610_RS29445 () | 8699..8956 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| A610_RS29450 () | 9196..9786 | - | 591 | WP_000766804.1 | DUF2726 domain-containing protein | - |
| A610_RS29455 () | 9825..10034 | - | 210 | Protein_14 | hemolysin expression modulator Hha | - |
| A610_RS29460 () | 10080..10541 | - | 462 | WP_001233835.1 | thermonuclease family protein | - |
| A610_RS29465 () | 10786..10998 | - | 213 | WP_001388588.1 | ANR family transcriptional regulator | - |
| A610_RS29470 () | 11530..12198 | - | 669 | WP_000392234.1 | hypothetical protein | - |
| A610_RS29475 () | 12484..12696 | - | 213 | WP_015056531.1 | ANR family transcriptional regulator | - |
| A610_RS29480 () | 12827..13387 | - | 561 | WP_000139325.1 | fertility inhibition protein FinO | - |
| A610_RS29485 () | 13442..13969 | - | 528 | Protein_20 | type-F conjugative transfer system pilin acetylase TraX | - |
| A610_RS30355 () | 13968..14132 | - | 165 | Protein_21 | TraU family protein | - |
| A610_RS30545 () | 14129..14455 | - | 327 | Protein_22 | conjugal transfer protein TraW | - |
| A610_RS30550 () | 14450..15001 | - | 552 | Protein_23 | conjugal transfer protein TraB | - |
| A610_RS29495 () | 15001..15705 | - | 705 | WP_110093084.1 | type-F conjugative transfer system secretin TraK | - |
| A610_RS29500 () | 15716..16282 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| A610_RS29505 () | 16304..16615 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| A610_RS29510 () | 16620..16982 | - | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| A610_RS29515 () | 17016..17243 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| A610_RS29520 () | 17331..18023 | - | 693 | WP_000332477.1 | PAS domain-containing protein | - |
| A610_RS29525 () | 18217..18600 | - | 384 | WP_001151566.1 | relaxosome protein TraM | - |
| A610_RS29530 () | 18940..19530 | + | 591 | WP_176453891.1 | transglycosylase SLT domain-containing protein | - |
| A610_RS29540 () | 19825..20646 | - | 822 | WP_001234482.1 | DUF945 domain-containing protein | - |
| A610_RS30360 () | 20825..21390 | + | 566 | Protein_33 | hypothetical protein | - |
| A610_RS29555 () | 21628..21786 | - | 159 | WP_001388592.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 21830..22054 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 21830..22054 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 21830..22054 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 21830..22054 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| A610_RS29560 () | 21866..22045 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| A610_RS29565 () | 22066..22668 | - | 603 | Protein_36 | plasmid SOS inhibition protein A | - |
| A610_RS29585 () | 23768..25435 | + | 1668 | WP_001091724.1 | group II intron reverse transcriptase/maturase | - |
| A610_RS30555 () | 25572..25688 | + | 117 | Protein_38 | pilus protein | - |
| A610_RS29595 () | 25774..25956 | - | 183 | Protein_39 | class I SAM-dependent methyltransferase | - |
| A610_RS29600 () | 25956..27302 | - | 1347 | Protein_40 | IS66 family transposase | - |
| A610_RS29605 () | 27322..27504 | - | 183 | WP_100138628.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| A610_RS29615 () | 27779..28798 | - | 1020 | WP_000878026.1 | IS110-like element ISEc11 family transposase | - |
| A610_RS29620 () | 28944..29111 | - | 168 | Protein_43 | IS66 family insertion sequence element accessory protein TnpB | - |
| A610_RS29625 () | 29108..29785 | - | 678 | WP_001088305.1 | IS66 family insertion sequence hypothetical protein | - |
| A610_RS29630 () | 30002..30994 | - | 993 | WP_001145107.1 | hypothetical protein | - |
| A610_RS30365 () | 31043..31198 | - | 156 | WP_000074142.1 | hypothetical protein | - |
| A610_RS29640 () | 31776..32333 | + | 558 | WP_001235713.1 | recombinase family protein | - |
| A610_RS29645 () | 32516..33376 | + | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| A610_RS29650 () | 33523..35994 | - | 2472 | Protein_49 | Tn3-like element TnAs3 family transposase | - |
| A610_RS29655 () | 35997..36083 | - | 87 | Protein_50 | helix-turn-helix domain-containing protein | - |
| A610_RS29660 () | 36137..36841 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| A610_RS29665 () | 36981..37382 | - | 402 | WP_000085189.1 | hypothetical protein | - |
| A610_RS29670 () | 37591..38682 | - | 1092 | WP_077628275.1 | group II intron reverse transcriptase/maturase | - |
| A610_RS29675 () | 38724..39647 | - | 924 | Protein_54 | IS66-like element ISEc43 family transposase | - |
| A610_RS29680 () | 39678..40028 | - | 351 | WP_000624688.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| A610_RS29685 () | 40025..40459 | - | 435 | WP_001309734.1 | IS66 family insertion sequence hypothetical protein | - |
| A610_RS29690 () | 40618..40824 | - | 207 | Protein_57 | transposase | - |
| A610_RS29700 () | 41674..42885 | - | 1212 | WP_001390768.1 | dispersin export-associated protein AatD | - |
| A610_RS29705 () | 42897..43526 | - | 630 | WP_000621743.1 | dispersin export ABC transporter ATP-binding protein AatC | - |
| A610_RS29710 () | 43519..44340 | - | 822 | WP_002431107.1 | dispersin export-associated protein AatB | - |
| A610_RS29715 () | 44237..45475 | - | 1239 | WP_001216022.1 | dispersin export ABC transporter outer membrane protein AatA | - |
| A610_RS29720 () | 45472..46602 | - | 1131 | WP_000209218.1 | dispersin export ABC transporter permease subunit AatP | - |
| A610_RS29725 () | 46982..47152 | + | 171 | Protein_63 | transposase | - |
| A610_RS29730 () | 47373..47609 | + | 237 | WP_000239755.1 | transposase | - |
| A610_RS30560 () | 47644..49370 | - | 1727 | Protein_65 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| A610_RS29750 () | 49687..50680 | - | 994 | Protein_66 | IS630 family transposase | - |
| A610_RS29755 () | 50898..51098 | - | 201 | WP_000643555.1 | AggR-activated transcriptional regulator Aar | - |
| A610_RS29760 () | 51204..51519 | - | 316 | Protein_68 | hypothetical protein | - |
| A610_RS29765 () | 51829..52179 | + | 351 | WP_000721276.1 | dispersin Aap | - |
| A610_RS29770 () | 52287..52502 | - | 216 | Protein_70 | integrase core domain-containing protein | - |
| A610_RS29775 () | 52541..52684 | + | 144 | WP_077628273.1 | hypothetical protein | - |
| A610_RS29780 () | 53019..53816 | + | 798 | WP_000769457.1 | aggregative adherence transcriptional regulator AggR | - |
| A610_RS29785 () | 53917..54111 | + | 195 | Protein_73 | IS1 family transposase | - |
| A610_RS29790 () | 54100..54288 | + | 189 | Protein_74 | transposase | - |
| A610_RS29795 () | 54495..54572 | + | 78 | Protein_75 | IS200/IS605 family transposase | - |
| A610_RS29800 () | 54571..54934 | + | 364 | Protein_76 | zinc ABC transporter substrate-binding protein | - |
| A610_RS29805 () | 54993..55360 | + | 368 | Protein_77 | transposase | - |
| A610_RS30370 () | 55593..55745 | + | 153 | WP_000565591.1 | hypothetical protein | - |
| A610_RS29810 () | 56248..56787 | - | 540 | WP_001387337.1 | isopentenyl-diphosphate Delta-isomerase | - |
| A610_RS29815 () | 56791..57819 | - | 1029 | WP_000869859.1 | class 1 isoprenoid biosynthesis enzyme | - |
| A610_RS29820 () | 57961..58128 | - | 168 | Protein_81 | integrase core domain-containing protein | - |
| A610_RS29825 () | 58128..59204 | + | 1077 | Protein_82 | IS256-like element IS1414 family transposase | - |
| A610_RS29830 () | 59195..59422 | - | 228 | WP_012602932.1 | hypothetical protein | - |
| A610_RS29835 () | 59471..59971 | - | 501 | WP_100138626.1 | aggregative adherence fimbria 3 major subunit Agg3A | - |
| A610_RS29840 () | 60146..60586 | - | 441 | WP_001390764.1 | aggregative adherence fimbria 3 minor subunit Agg3B | - |
| A610_RS29845 () | 60600..63149 | - | 2550 | WP_000902426.1 | aggregative adherence fimbria 3 usher protein Agg3C | - |
| A610_RS29850 () | 63203..63955 | - | 753 | WP_000702698.1 | aggregative adherence fimbria 3 chaperone Agg3D | - |
| A610_RS29855 () | 64326..64649 | + | 324 | Protein_88 | DDE-type integrase/transposase/recombinase | - |
| A610_RS29860 () | 64703..65442 | + | 740 | Protein_89 | IS3 family transposase | - |
| A610_RS29870 () | 66115..67623 | + | 1509 | WP_001189118.1 | group II intron reverse transcriptase/maturase | - |
| A610_RS29875 () | 67713..68186 | + | 474 | Protein_91 | IS3 family transposase | - |
| A610_RS29880 () | 68197..69024 | + | 828 | Protein_92 | translesion error-prone DNA polymerase V subunit UmuC | - |
| A610_RS29885 () | 69056..69448 | - | 393 | WP_000340832.1 | plasmid partitioning/stability family protein | - |
| A610_RS29890 () | 69453..70424 | - | 972 | WP_001103689.1 | hypothetical protein | - |
| A610_RS29895 () | 70653..71297 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| A610_RS29900 () | 71291..71566 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| A610_RS29905 () | 71704..72513 | - | 810 | WP_000016979.1 | site-specific integrase | - |
| A610_RS29910 () | 72514..72819 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| A610_RS29915 () | 72821..73039 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| A610_RS29920 () | 73401..73589 | - | 189 | Protein_100 | IS66 family transposase | - |
| A610_RS29925 () | 73650..74783 | + | 1134 | WP_000555401.1 | IS110-like element ISEc45 family transposase | - |
| A610_RS29930 () | 75037..76461 | - | 1425 | Protein_102 | IS66-like element ISEc23 family transposase | - |
| A610_RS29935 () | 76492..76842 | - | 351 | WP_000624722.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| A610_RS29940 () | 76839..77264 | - | 426 | WP_000422741.1 | IS66 family insertion sequence hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|