MGE detailed information

MGE type: Conjugative plasmid        MGE length: 204468 bp
Accession: NZ_CP008842        Location: 1..204468         Organism: Klebsiella michiganensis strain M1       Replicon: plasmid pKOXM1A


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HR38_RS27085 () 651..2960 + 2310 WP_004152290.1 TerB N-terminal domain-containing protein -
HR38_RS27090 () 2964..4280 + 1317 WP_004152291.1 ATP-binding protein -
HR38_RS27095 () 4277..6472 + 2196 WP_000093087.1 DEAD/DEAH box helicase -
HR38_RS27100 () 7959..8831 - 873 WP_040118400.1 incFII family plasmid replication initiator RepA -
HR38_RS30655 () 8824..8895 - 72 WP_071887233.1 RepA leader peptide Tap -
HR38_RS27105 () 9111..9380 - 270 WP_040118434.1 replication regulatory protein RepA -
HR38_RS27110 () 9521..10087 - 567 WP_051800686.1 Phospholipase D VF
HR38_RS30665 () 10094..10297 - 204 Protein_8 DUF2726 domain-containing protein -
HR38_RS27115 () 10328..11713 - 1386 Protein_9 Tn3 family transposase TnpA_TnEc1 Transposase
HR38_RS27120 () 11714..11992 + 279 Protein_10 IS3 family transposase -
HR38_RS27125 () 12195..13004 - 810 WP_004118865.1 N-formylglutamate deformylase -
HR38_RS27130 () 12997..14205 - 1209 WP_040118401.1 imidazolonepropionase -
HR38_RS27135 () 14217..15608 - 1392 WP_004118873.1 cytosine permease -
HR38_RS32110 () 15661..16569 - 909 WP_162933674.1 urocanate hydratase -
HR38_RS32115 () 16578..17337 - 760 Protein_15 hypothetical protein -
HR38_RS27145 () 17684..18842 + 1159 Protein_16 ATP-binding cassette domain-containing protein -
HR38_RS27150 () 18839..19484 + 646 Protein_17 ABC transporter permease subunit -
HR38_RS31260 () 19544..20053 + 510 Protein_18 aromatic amino acid lyase -
HR38_RS27160 () 20087..20644 - 558 WP_040118404.1 HutD family protein -
HR38_RS27165 () 20641..21402 - 762 WP_032413289.1 histidine utilization repressor -
HR38_RS27170 () 21501..22868 + 1368 WP_040118405.1 formimidoylglutamate deiminase -
HR38_RS31265 () 23091..23782 - 692 Protein_22 IS1 family transposase -
HR38_RS27180 () 24588..25994 + 1407 WP_004118895.1 cytosine permease -
HR38_RS27185 () 26031..27620 + 1590 WP_004118898.1 AMP-binding protein -
HR38_RS27190 () 27617..28609 + 993 WP_004118901.1 DsbA family protein -
HR38_RS30685 () 28727..28834 - 108 Protein_26 antirestriction protein ArdA -
HR38_RS30690 () 29236..29514 + 279 WP_004118904.1 transposase -
HR38_RS31270 () 29597..30772 - 1176 Protein_28 IS3 family transposase -
HR38_RS27200 () 30849..31814 - 966 WP_004118922.1 DMT family transporter -
HR38_RS27205 () 31811..32629 - 819 WP_004118925.1 Glutamine transport ATP-binding protein GlnQ VF
HR38_RS27210 () 32634..33296 - 663 WP_004118928.1 amino acid ABC transporter permease -
HR38_RS27215 () 33293..33964 - 672 WP_004118931.1 amino acid ABC transporter permease -
HR38_RS27220 () 33988..34836 - 849 WP_004118155.1 transporter substrate-binding domain-containing protein -
HR38_RS27225 () 34993..35946 + 954 WP_004118935.1 Glycine cleavage system transcriptional activator VF
HR38_RS27230 () 36033..37244 + 1212 WP_004118158.1 M24 family metallopeptidase -
HR38_RS27235 () 37375..38343 + 969 WP_077255412.1 IS5 family transposase IS903B Transposase
HR38_RS27240 () 38560..39147 - 588 WP_032716672.1 fertility inhibition protein FinO -
HR38_RS27245 () 39289..40014 - 726 WP_040118407.1 type-F conjugative transfer system pilin acetylase TraX -
HR38_RS27250 () 40107..45371 - 5265 WP_040118408.1 Multifunctional conjugation protein TraI Relaxase
HR38_RS27255 () 45371..47701 - 2331 WP_040118437.1 type IV conjugative transfer system coupling protein TraD -
HR38_RS27260 () 47895..48626 - 732 WP_032716670.1 complement resistance protein TraT -
HR38_RS27265 () 48821..49435 - 615 WP_032732092.1 hypothetical protein -
HR38_RS27270 () 49461..52283 - 2823 WP_040118409.1 conjugal transfer mating pair stabilization protein TraG -
HR38_RS27275 () 52283..53653 - 1371 WP_032700807.1 conjugal transfer protein TraH -
HR38_RS27280 () 53640..54068 - 429 WP_032700808.1 conjugal transfer protein TrbF -
HR38_RS27285 () 54061..54627 - 567 WP_032732090.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
HR38_RS27290 () 54602..54838 - 237 WP_032700810.1 type-F conjugative transfer system pilin chaperone TraQ -
HR38_RS27295 () 54849..55601 - 753 WP_040118410.1 type-F conjugative transfer system pilin assembly protein TraF -
HR38_RS27300 () 55624..55950 - 327 WP_032700812.1 hypothetical protein -
HR38_RS27305 () 56240..57208 - 969 WP_077255412.1 IS5 family transposase IS903B Transposase
HR38_RS27310 () 57288..59243 - 1956 WP_040118411.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
HR38_RS27315 () 59243..59845 - 603 WP_162933671.1 type-F conjugative transfer system pilin assembly protein TrbC -
HR38_RS27320 () 59885..60874 - 990 WP_049268071.1 conjugal transfer pilus assembly protein TraU -
HR38_RS27325 () 60885..61514 - 630 WP_032716660.1 type-F conjugative transfer system protein TraW -
HR38_RS27330 () 61511..61903 - 393 WP_032716659.1 type-F conjugative transfer system protein TrbI -
HR38_RS27335 () 61903..64542 - 2640 WP_032716658.1 type IV secretion system protein TraC -
HR38_RS27340 () 64622..65017 - 396 WP_162933670.1 hypothetical protein -
HR38_RS27350 () 65388..65792 - 405 WP_040118414.1 hypothetical protein -
HR38_RS27355 () 65789..66010 - 222 WP_032732073.1 hypothetical protein -
HR38_RS27365 () 66492..66710 - 219 WP_040118438.1 hypothetical protein -
HR38_RS30720 () 67078..67647 - 570 WP_071889124.1 type IV conjugative transfer system lipoprotein TraV -
HR38_RS27370 () 67666..67872 - 207 WP_032700826.1 hypothetical protein -
HR38_RS27375 () 67853..68449 - 597 WP_119834738.1 TraP protein -
HR38_RS27380 () 68442..69860 - 1419 WP_040118415.1 conjugal transfer protein TraB -
HR38_RS27385 () 69860..70594 - 735 WP_040118416.1 type-F conjugative transfer system secretin TraK -
HR38_RS27390 () 70581..71147 - 567 WP_040118417.1 type IV conjugative transfer system protein TraE -
HR38_RS27395 () 71167..71472 - 306 WP_020323523.1 type IV conjugative transfer system protein TraL -
HR38_RS27400 () 71486..71854 - 369 WP_040118418.1 type IV conjugative transfer system pilin TraA -
HR38_RS30725 () 71917..72081 - 165 WP_032426810.1 TraY domain-containing protein -
HR38_RS30730 () 72259..72948 - 690 WP_071889125.1 hypothetical protein -
HR38_RS27405 () 73149..73538 - 390 WP_032700831.1 relaxosome protein TraM -
HR38_RS27410 () 73963..74442 + 480 WP_032716648.1 hypothetical protein VF
HR38_RS27415 () 74480..75010 - 531 WP_032716647.1 antirestriction protein -
HR38_RS27420 () 75695..75841 - 147 WP_032700834.1 hypothetical protein -
HR38_RS27425 () 75935..76282 - 348 WP_032700835.1 hypothetical protein -
HR38_RS27430 () 76308..76466 - 159 WP_162180130.1 hypothetical protein -
HR38_RS27435 () 76523..76798 - 276 WP_032700867.1 hypothetical protein -
HR38_RS27440 () 77617..77898 - 282 WP_004118961.1 helix-turn-helix transcriptional regulator -
HR38_RS27445 () 77879..78208 - 330 WP_004118963.1 type II toxin-antitoxin system RelE/ParE family toxin -
HR38_RS27450 () 78612..79340 - 729 WP_004118966.1 plasmid SOS inhibition protein A -
HR38_RS27455 () 79337..79768 - 432 WP_004118968.1 conjugation system SOS inhibitor PsiB -
HR38_RS27460 () 79812..81869 - 2058 WP_032700842.1 ParB/RepB/Spo0J family partition protein -
HR38_RS27465 () 81937..82170 - 234 WP_009654057.1 DUF905 domain-containing protein -
HR38_RS27470 () 82219..82767 - 549 WP_009654061.1 single-stranded DNA-binding protein -
HR38_RS27475 () 83106..83327 + 222 Protein_85 hypothetical protein -
HR38_RS27480 () 83601..84164 - 564 WP_032700843.1 methyltransferase -
HR38_RS27485 () 84213..85595 - 1383 WP_032700844.1 DUF3560 domain-containing protein -
HR38_RS27490 () 85646..85876 - 231 WP_032700845.1 hypothetical protein -
HR38_RS31885 () 86033..86172 - 140 Protein_89 single-stranded DNA-binding protein -
HR38_RS30745 () 86349..86558 + 210 Protein_90 hypothetical protein -
HR38_RS30750 () 86669..86914 - 246 WP_074172513.1 DNA polymerase III subunit theta -
HR38_RS27505 () 87100..87291 - 192 WP_032700847.1 hypothetical protein -
HR38_RS27510 () 87369..87797 - 429 WP_032700848.1 antirestriction protein -
HR38_RS27515 () 87967..88752 - 786 WP_032700849.1 hypothetical protein -
HR38_RS27520 () 88806..89225 - 420 WP_032700850.1 DUF1380 domain-containing protein -
HR38_RS27525 () 89237..89458 - 222 WP_032700851.1 hypothetical protein -
HR38_RS27530 () 89458..90138 - 681 WP_032700852.1 DNA methylase -
HR38_RS27535 () 90516..90795 - 280 Protein_98 hypothetical protein -
HR38_RS30760 () 91113..91343 - 231 WP_047665741.1 hypothetical protein -
HR38_RS27545 () 91407..92078 - 672 WP_032700854.1 plasmid partitioning/stability family protein -
HR38_RS27550 () 92081..93052 - 972 WP_077255421.1 StbA family protein -
HR38_RS27555 () 93271..93714 + 444 WP_040118420.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
HR38_RS27560 () 93714..94982 + 1269 WP_032752101.1 Y-family DNA polymerase -
HR38_RS27565 () 95147..95398 + 252 WP_032752108.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
HR38_RS27570 () 95395..95682 + 288 WP_032693963.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
HR38_RS27575 () 96775..97124 + 350 Protein_106 DUF4113 domain-containing protein -
HR38_RS27580 () 97848..98819 - 972 WP_032752114.1 ParB/RepB/Spo0J family plasmid partition protein -
HR38_RS27585 () 98819..99985 - 1167 WP_032752115.1 Sporulation initiation inhibitor protein Soj VF
HR38_RS27590 () 100804..101814 + 1011 WP_032752116.1 RepB family plasmid replication initiator protein -
HR38_RS27595 () 102123..102863 - 741 WP_032752117.1 site-specific integrase -
HR38_RS27600 () 103328..104593 - 1266 WP_051800687.1 AIPR family protein -
HR38_RS27605 () 104638..105663 + 1026 WP_040118421.1 IS630 family transposase ISEc40 Transposase
HR38_RS27620 () 107112..107468 - 357 WP_040118422.1 hypothetical protein -
HR38_RS31285 () 107881..108413 - 533 Protein_115 IS256 family transposase ISEae1 Transposase
HR38_RS27630 () 108740..109483 - 744 WP_040118423.1 site-specific integrase -
HR38_RS27635 () 109525..109854 - 330 WP_040118424.1 hypothetical protein -
HR38_RS27640 () 110163..110831 - 669 WP_040118425.1 hypothetical protein -
HR38_RS27645 () 110920..111192 - 273 WP_032752086.1 hypothetical protein -
HR38_RS27650 () 112070..112978 + 909 WP_007374408.1 HNH endonuclease -
HR38_RS27655 () 113386..113736 - 351 WP_032752126.1 DUF305 domain-containing protein -
HR38_RS27660 () 113882..114313 - 432 WP_007374411.1 silver-binding protein SilE -
HR38_RS27665 () 114559..116034 - 1476 WP_040118426.1 copper/silver sensor histidine kinase SilS -
HR38_RS27670 () 116027..116707 - 681 WP_000697968.1 Transcriptional regulatory protein CusR VF
HR38_RS27675 () 116897..118282 + 1386 WP_000475503.1 Cation efflux system protein CusC VF
HR38_RS27680 () 118311..118664 + 354 WP_001246153.1 cation efflux system protein CusF -
HR38_RS27685 () 118778..120070 + 1293 WP_023602553.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
HR38_RS27690 () 120081..123227 + 3147 WP_000574021.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
HR38_RS27695 () 123314..123754 + 441 WP_002436620.1 hypothetical protein -
HR38_RS27700 () 123852..126323 + 2472 WP_142132150.1 Ag(+)-translocating P-type ATPase SilP -
HR38_RS27705 () 126364..126561 + 198 WP_000843497.1 DUF2933 domain-containing protein -
HR38_RS27710 () 126595..127332 - 738 WP_004118669.1 Murein DD-endopeptidase MepM VF
HR38_RS27715 () 127621..128070 - 450 WP_001023257.1 copper resistance protein -
HR38_RS27720 () 128305..130122 + 1818 WP_040118428.1 multicopper oxidase PcoA -
HR38_RS27725 () 130128..131018 + 891 WP_001378118.1 copper resistance outer membrane transporter PcoB -
HR38_RS27730 () 131058..131438 + 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
HR38_RS27735 () 131443..132372 + 930 WP_004118344.1 copper resistance inner membrane protein PcoD -
HR38_RS27740 () 132427..133107 + 681 WP_001188930.1 Transcriptional activator protein CopR VF
HR38_RS27745 () 133104..134504 + 1401 WP_002436614.1 copper resistance membrane spanning protein PcoS -
HR38_RS27750 () 134720..135154 + 435 WP_004118347.1 hypothetical protein -
HR38_RS27755 () 135533..135631 - 99 WP_004118688.1 type II toxin-antitoxin system RelE/ParE family toxin -
HR38_RS27760 () 135618..135797 - 180 WP_004118349.1 type II toxin-antitoxin system ParD family antitoxin -
HR38_RS27765 () 136111..136374 + 264 WP_009310051.1 hypothetical protein -
HR38_RS27770 () 136371..136937 + 567 WP_009310052.1 hypothetical protein -
HR38_RS27775 () 136968..137462 + 495 WP_004213594.1 hypothetical protein -
HR38_RS27780 () 137523..137726 + 204 WP_004150739.1 hemolysin expression modulator Hha -
HR38_RS31290 () 137820..138508 + 689 Protein_147 IS3 family transposase -
HR38_RS27795 () 139181..140689 + 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
HR38_RS31890 () 140770..140949 + 180 Protein_149 IS3 family transposase -
HR38_RS27800 () 141231..142307 + 1077 WP_000227969.1 IS110 family transposase ISEc21 Transposase
HR38_RS31895 () 142324..142632 + 309 Protein_151 IS3 family transposase ISLad1 Transposase
HR38_RS27805 () 143062..144615 - 1554 WP_032716625.1 L-lactate permease -
HR38_RS27810 () 145051..146748 + 1698 WP_003033249.1 D-lactate dehydrogenase -
HR38_RS27815 () 146823..147542 + 720 WP_001102107.1 (Fe-S)-binding protein -
HR38_RS27820 () 147553..148980 + 1428 WP_000023895.1 iron-sulfur cluster-binding protein -
HR38_RS27825 () 148973..149668 + 696 WP_004118595.1 lactate utilization protein C -
HR38_RS27830 () 149718..150098 - 381 Protein_157 gluconate permease -
HR38_RS27835 () 150309..150620 + 312 WP_004118600.1 type II toxin-antitoxin system HigB family toxin Toxin Detail
HR38_RS27840 () 150617..151036 + 420 WP_000990392.1 helix-turn-helix domain-containing protein Antitoxin Detail
HR38_RS27845 () 151073..152275 - 1203 WP_003031541.1 hypothetical protein -
HR38_RS27850 () 152268..152597 - 330 WP_004118613.1 hypothetical protein -
HR38_RS27855 () 152594..153253 - 660 WP_000078540.1 hypothetical protein -
HR38_RS32120 () 153677..154270 - 594 WP_044348674.1 hypothetical protein -
HR38_RS27865 () 154586..154939 + 354 WP_001114073.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
HR38_RS27870 () 154987..155349 + 363 WP_000783215.1 arsenite efflux transporter metallochaperone ArsD -
HR38_RS27875 () 155367..157118 + 1752 WP_040118429.1 arsenite efflux transporter ATPase subunit ArsA -
HR38_RS27880 () 157167..158456 + 1290 WP_000922630.1 arsenite efflux transporter membrane subunit ArsB -
HR38_RS27885 () 158469..158894 + 426 WP_000065758.1 glutaredoxin-dependent arsenate reductase -
HR38_RS27890 () 158925..159191 - 267 WP_102047566.1 hypothetical protein -
HR38_RS27895 () 159265..159969 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
HR38_RS30835 () 160023..160703 - 681 Protein_171 hypothetical protein -
HR38_RS27900 () 160973..161239 + 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
HR38_RS27905 () 161227..161709 + 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
HR38_RS30840 () 161909..162826 + 918 Protein_174 ISNCY family transposase ISLad2 Transposase
HR38_RS27915 () 162916..164415 + 1500 WP_004118622.1 IS21 family transposase ISEc10 Transposase
HR38_RS27920 () 164412..165167 + 756 WP_038423655.1 IS21 family transposase ISEc10 Transposase
HR38_RS31900 () 165234..165683 + 450 Protein_177 ISNCY family transposase ISLad2 Transposase
HR38_RS27930 () 166184..166930 - 747 Protein_178 IS3 family transposase ISKpn38 Transposase
HR38_RS27935 () 167052..168032 + 981 WP_000019473.1 IS5 family transposase ISKpn26 Transposase
HR38_RS27940 () 168614..169133 - 520 Protein_180 IS5 family transposase ISPst7 Transposase
HR38_RS27945 () 169241..170110 - 870 WP_004152692.1 HTH-type transcriptional activator CmpR VF
HR38_RS27950 () 170104..171114 - 1011 WP_004152693.1 phosphonate dehydrogenase PtxD -
HR38_RS27955 () 171123..171950 - 828 WP_004152694.1 phosphonate ABC transporter, permease protein PhnE -
HR38_RS27960 () 171959..172822 - 864 WP_004152695.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
HR38_RS27965 () 172819..173646 - 828 WP_012637488.1 Glutamine transport ATP-binding protein GlnQ VF
HR38_RS27970 () 173830..176838 - 3009 WP_004118541.1 Tn3 family transposase ISEc63 Transposase
HR38_RS27975 () 176999..177556 + 558 WP_040118433.1 Tn3 family transposase ISEc63 Transposase
HR38_RS27980 () 177688..178020 + 333 WP_004118538.1 multidrug efflux SMR transporter -
HR38_RS27985 () 178374..179522 - 1149 WP_011977829.1 Na+/H+ antiporter NhaA -
HR38_RS27990 () 179797..180171 - 375 WP_004118534.1 fluoride efflux transporter CrcB -
HR38_RS27995 () 180700..181896 + 1197 WP_001549953.1 MFS transporter -
HR38_RS28000 () 181968..182795 - 828 WP_004118529.1 universal stress protein -
HR38_RS28005 () 182814..184292 - 1479 WP_001549885.1 SulP family inorganic anion transporter -
HR38_RS28010 () 184776..185129 + 354 WP_001549886.1 metalloregulator ArsR/SmtB family transcription factor -
HR38_RS28015 () 185266..185823 - 558 WP_003100847.1 Tn3 family transposase TnpR_ISPa38 Transposase
HR38_RS28020 () 185817..186185 - 369 WP_040118442.1 hypothetical protein -
HR38_RS28025 () 186215..186919 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
HR38_RS28030 () 187013..187513 - 501 WP_003100856.1 hypothetical protein -
HR38_RS28035 () 187510..187836 - 327 WP_006812576.1 hypothetical protein -
HR38_RS28040 () 188091..188447 - 357 WP_003465043.1 cupin domain-containing protein -
HR38_RS28045 () 188437..188838 - 402 WP_001293886.1 DUF86 domain-containing protein -
HR38_RS28050 () 188835..189125 - 291 WP_001247892.1 nucleotidyltransferase -
HR38_RS28055 () 189262..189966 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
HR38_RS28060 () 190038..190526 + 489 Protein_204 IS110 family transposase ISKpn2 Transposase
HR38_RS28065 () 190752..190865 - 114 Protein_205 IS3 family transposase ISSen4 Transposase
HR38_RS28070 () 191135..192088 + 954 WP_001198018.1 cation diffusion facilitator family transporter -
HR38_RS28075 () 192200..192574 + 375 WP_011977761.1 hypothetical protein -
HR38_RS28080 () 193012..193593 + 582 WP_011977760.1 cytochrome b/b6 domain-containing protein -
HR38_RS28085 () 193729..194418 + 690 WP_016240364.1 VIT family protein -
HR38_RS28090 () 194561..194872 - 312 WP_011977758.1 hypothetical protein -
HR38_RS28095 () 195068..195175 + 108 Protein_211 transposase -
HR38_RS28100 () 195533..196054 - 522 Protein_212 zinc-binding dehydrogenase -
HR38_RS28105 () 196104..196808 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
HR38_RS28110 () 196868..197371 - 504 Protein_214 Zinc-type alcohol dehydrogenase-like protein VF
HR38_RS28120 () 197832..198914 + 1083 WP_004152286.1 DNA-binding transcriptional repressor LacI -
HR38_RS28125 () 199036..202110 + 3075 WP_032427316.1 beta-galactosidase -
HR38_RS28130 () 202162..203415 + 1254 WP_003846917.1 lactose permease -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance