MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 52226 bp
Accession: NZ_CP007029 Location: 2350521..2402746 Organism: Thioalkalivibrio paradoxus ARh Replicon: chromosome
Accession: NZ_CP007029 Location: 2350521..2402746 Organism: Thioalkalivibrio paradoxus ARh Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| THITH_RS10570 () | 2345583..2346455 | - | 873 | WP_006748128.1 | bifunctional nuclease family protein | - |
| THITH_RS10575 () | 2346534..2346761 | - | 228 | WP_006748127.1 | hypothetical protein | - |
| THITH_RS10580 () | 2346792..2347772 | - | 981 | WP_006748126.1 | hydrolase | - |
| THITH_RS18535 () | 2347766..2347936 | - | 171 | WP_156925516.1 | hypothetical protein | - |
| THITH_RS10585 () | 2347933..2349060 | - | 1128 | WP_006748125.1 | FAD-dependent oxidoreductase | - |
| THITH_RS10590 () | 2349418..2350896 | + | 1479 | WP_006748124.1 | DUF853 family protein | - |
| THITH_RS10595 () | 2351146..2351553 | + | 408 | WP_006748123.1 | hypothetical protein | - |
| THITH_RS10600 () | 2351655..2353514 | + | 1860 | WP_041483772.1 | hypothetical protein | - |
| THITH_RS10605 () | 2353640..2354989 | - | 1350 | WP_006748121.1 | FAD-dependent oxidoreductase | - |
| THITH_RS10610 () | 2355142..2356107 | - | 966 | WP_041483431.1 | sulfur oxygenase/reductase | - |
| THITH_RS10615 () | 2356113..2357450 | - | 1338 | WP_051418671.1 | outer membrane protein transport protein | - |
| THITH_RS10620 () | 2357742..2358779 | + | 1038 | WP_006748118.1 | dihydroorotase | - |
| THITH_RS10625 () | 2358832..2359548 | + | 717 | WP_006748117.1 | UPF0149 family protein | - |
| THITH_RS10630 () | 2359762..2360049 | - | 288 | WP_006748116.1 | hypothetical protein | - |
| THITH_RS10635 () | 2360430..2361107 | + | 678 | WP_006748115.1 | VTT domain-containing protein | - |
| THITH_RS10640 () | 2361153..2362208 | - | 1056 | WP_006748114.1 | DUF21 domain-containing protein | - |
| THITH_RS10645 () | 2362260..2362874 | - | 615 | WP_006748113.1 | hypothetical protein | - |
| THITH_RS10650 () | 2362986..2363783 | - | 798 | WP_006748112.1 | transglutaminase family protein | - |
| THITH_RS10655 () | 2364259..2365092 | + | 834 | WP_006748111.1 | dihydrofolate reductase family protein | - |
| THITH_RS10660 () | 2365361..2366347 | - | 987 | WP_025367485.1 | DMT family transporter | - |
| THITH_RS10665 () | 2366704..2368521 | + | 1818 | WP_006748109.1 | SLC13 family permease | - |
| THITH_RS10670 () | 2368608..2370146 | - | 1539 | WP_006748108.1 | UPF0149 family protein | - |
| THITH_RS10675 () | 2370330..2370575 | + | 246 | WP_006748107.1 | DUF1049 domain-containing protein | - |
| THITH_RS10680 () | 2370608..2374012 | - | 3405 | WP_006748106.1 | DEAD/DEAH box helicase family protein | - |
| THITH_RS10685 () | 2374009..2374404 | - | 396 | WP_006748105.1 | hypothetical protein | - |
| THITH_RS10690 () | 2374702..2374953 | + | 252 | WP_006748104.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| THITH_RS10695 () | 2374950..2375237 | + | 288 | WP_006748103.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| THITH_RS17965 () | 2375257..2375535 | - | 279 | WP_006748102.1 | YgiT-type zinc finger protein | - |
| THITH_RS17970 () | 2375532..2375963 | - | 432 | WP_198019441.1 | DUF4258 domain-containing protein | - |
| THITH_RS10705 () | 2376526..2377785 | - | 1260 | WP_006748101.1 | ATP-binding protein | - |
| THITH_RS10710 () | 2378055..2379236 | - | 1182 | WP_006748100.1 | restriction endonuclease subunit S | - |
| THITH_RS10715 () | 2379233..2380735 | - | 1503 | WP_006748099.1 | type I restriction-modification system subunit M | - |
| THITH_RS18795 () | 2381326..2381481 | - | 156 | WP_198019442.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| THITH_RS17985 () | 2381633..2381821 | - | 189 | WP_006748097.1 | hypothetical protein | - |
| THITH_RS18540 () | 2381950..2382303 | - | 354 | WP_156925517.1 | hypothetical protein | - |
| THITH_RS18545 () | 2382419..2383081 | - | 663 | WP_006748096.1 | hypothetical protein | - |
| THITH_RS10725 () | 2383192..2383686 | + | 495 | WP_156925518.1 | hypothetical protein | - |
| THITH_RS10730 () | 2383743..2384006 | - | 264 | WP_006748093.1 | Txe/YoeB family addiction module toxin | - |
| THITH_RS10735 () | 2384003..2384245 | - | 243 | WP_006748092.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| THITH_RS10740 () | 2384450..2384983 | - | 534 | WP_156925584.1 | Uma2 family endonuclease | - |
| THITH_RS18550 () | 2385222..2385470 | - | 249 | WP_156925519.1 | type II toxin-antitoxin system VapC family toxin | - |
| THITH_RS18800 () | 2385373..2385600 | - | 228 | WP_084222657.1 | DUF86 domain-containing protein | - |
| THITH_RS10750 () | 2385773..2386042 | + | 270 | WP_006748089.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| THITH_RS10755 () | 2386039..2386455 | + | 417 | WP_006748088.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| THITH_RS10760 () | 2386498..2388336 | - | 1839 | WP_198019510.1 | NERD domain-containing protein | - |
| THITH_RS10765 () | 2388655..2389014 | + | 360 | WP_006748086.1 | MbcA/ParS/Xre antitoxin family protein | Antitoxin Detail |
| THITH_RS10770 () | 2389016..2389762 | + | 747 | WP_006748085.1 | RES family NAD+ phosphorylase | Toxin Detail |
| THITH_RS10775 () | 2389983..2390159 | - | 177 | Protein_2160 | type II toxin-antitoxin system VapC family toxin | - |
| THITH_RS10780 () | 2390192..2390467 | - | 276 | WP_006748083.1 | helix-turn-helix domain-containing protein | - |
| THITH_RS10785 () | 2390761..2393751 | - | 2991 | WP_041483432.1 | hypothetical protein | - |
| THITH_RS10790 () | 2394165..2395187 | + | 1023 | WP_025367491.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| THITH_RS10795 () | 2395270..2396121 | + | 852 | WP_006748080.1 | hypothetical protein | - |
| THITH_RS10800 () | 2396854..2397201 | - | 348 | WP_006748079.1 | hypothetical protein | - |
| THITH_RS10810 () | 2397616..2399104 | + | 1489 | Protein_2166 | ISNCY family transposase | - |
| THITH_RS10815 () | 2399398..2400219 | - | 822 | WP_006748076.1 | alpha/beta hydrolase | - |
| THITH_RS10820 () | 2400598..2401731 | - | 1134 | WP_006748075.1 | IS91 family transposase | - |
| THITH_RS10825 () | 2401724..2402104 | - | 381 | Protein_2169 | tyrosine-type recombinase/integrase | - |
| THITH_RS10830 () | 2402071..2403222 | - | 1152 | Protein_2170 | IS66 family transposase | - |
| THITH_RS10835 () | 2403303..2404872 | + | 1570 | Protein_2171 | IS3 family transposase | - |
| THITH_RS10840 () | 2404902..2405429 | - | 528 | Protein_2172 | transposase | - |
| THITH_RS10845 () | 2405478..2405831 | - | 354 | WP_006746000.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| THITH_RS10850 () | 2405828..2406061 | - | 234 | WP_006749214.1 | hypothetical protein | - |
| THITH_RS10855 () | 2406231..2406803 | - | 573 | Protein_2175 | phage integrase N-terminal SAM-like domain-containing protein | - |
| THITH_RS17995 () | 2406920..2407663 | - | 744 | WP_006748069.1 | CPBP family intramembrane metalloprotease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|