MGE detailed information
MGE type: Genomic_island MGE length: 25522 bp
Accession: NZ_CP006929 Location: 445905..471426 Organism: Dickeya zeae EC1 Replicon: chromosome
Accession: NZ_CP006929 Location: 445905..471426 Organism: Dickeya zeae EC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| W909_RS01995 () | 441745..443001 | + | 1257 | WP_016943011.1 | integrase arm-type DNA-binding domain-containing protein | - |
| W909_RS02000 () | 443120..445891 | + | 2772 | WP_016943010.1 | site-specific DNA-methyltransferase | - |
| W909_RS02005 () | 445905..447098 | - | 1194 | WP_016943009.1 | phospholipase D family protein | - |
| W909_RS02015 () | 447842..448831 | + | 990 | WP_016943985.1 | IS110 family transposase IS1663 | Transposase |
| W909_RS02020 () | 449183..449758 | - | 576 | WP_016943942.1 | hypothetical protein | - |
| W909_RS02025 () | 449834..450046 | - | 213 | WP_016943943.1 | AlpA family phage regulatory protein | - |
| W909_RS02030 () | 450167..450796 | - | 630 | WP_029456671.1 | inovirus Gp2 family protein | - |
| W909_RS02035 () | 451625..452452 | + | 828 | WP_033581532.1 | ribbon-helix-helix domain-containing protein | - |
| W909_RS02040 () | 452592..453458 | + | 867 | WP_016943946.1 | GTPase family protein | - |
| W909_RS02045 () | 453545..454366 | + | 822 | WP_016943947.1 | DUF945 domain-containing protein | - |
| W909_RS02050 () | 454396..454869 | + | 474 | WP_016943948.1 | DNA repair protein RadC | - |
| W909_RS02055 () | 454933..455247 | + | 315 | WP_016943949.1 | TA system toxin CbtA family protein | - |
| W909_RS02060 () | 455365..456198 | + | 834 | WP_016943950.1 | DUF4942 domain-containing protein | - |
| W909_RS02065 () | 456309..456557 | + | 249 | WP_012883160.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| W909_RS02070 () | 456561..456836 | + | 276 | WP_016943951.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| W909_RS20475 () | 456920..457603 | - | 684 | Protein_403 | IS1 family transposase | - |
| W909_RS02080 () | 457738..460122 | + | 2385 | WP_016943953.1 | dynamin family protein | - |
| W909_RS02085 () | 460119..461024 | + | 906 | WP_016943954.1 | hypothetical protein | - |
| W909_RS02090 () | 461021..462094 | + | 1074 | WP_016943955.1 | patatin-like phospholipase family protein | - |
| W909_RS02095 () | 462574..462804 | + | 231 | WP_033576634.1 | antitoxin | Antitoxin Detail |
| W909_RS02100 () | 462804..463208 | + | 405 | WP_033576633.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| W909_RS02105 () | 463289..463732 | + | 444 | WP_016943280.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| W909_RS02110 () | 463822..464622 | + | 801 | WP_016943279.1 | helix-turn-helix transcriptional regulator | - |
| W909_RS02115 () | 465006..466445 | + | 1440 | WP_016943278.1 | sensor domain-containing diguanylate cyclase | - |
| W909_RS19885 () | 466486..466620 | - | 135 | Protein_412 | SAM-dependent methyltransferase | - |
| W909_RS02120 () | 466905..467759 | + | 855 | WP_016943277.1 | pirin family protein | - |
| W909_RS02125 () | 467956..468294 | - | 339 | WP_029456566.1 | hypothetical protein | - |
| W909_RS02130 () | 468904..469530 | + | 627 | WP_020477070.1 | hypothetical protein | - |
| W909_RS20480 () | 469787..470119 | - | 333 | WP_020477069.1 | hypothetical protein | - |
| W909_RS20730 () | 470074..470391 | - | 318 | WP_016943272.1 | hypothetical protein | - |
| W909_RS02140 () | 470623..471426 | + | 804 | WP_016943271.1 | hypothetical protein | - |
| W909_RS02145 () | 471677..472084 | + | 408 | Protein_419 | hypothetical protein | - |
| W909_RS02150 () | 472491..473336 | + | 846 | WP_016943269.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| W909_RS02155 () | 473336..474316 | + | 981 | WP_016943268.1 | substrate-binding domain-containing protein | - |
| W909_RS02160 () | 474320..475825 | + | 1506 | WP_016943267.1 | sugar ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|