MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 87176 bp
Accession: NZ_CP004364 Location: 1..87176 Organism: Komagataeibacter xylinus E25 Replicon: plasmid pGX4
Accession: NZ_CP004364 Location: 1..87176 Organism: Komagataeibacter xylinus E25 Replicon: plasmid pGX4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H845_RS15895 () | 5..776 | + | 772 | Protein_0 | hypothetical protein | VF |
| H845_RS15900 () | 757..1440 | + | 684 | WP_117126083.1 | hypothetical protein | VF |
| H845_RS15905 () | 1437..2420 | + | 984 | WP_010516197.1 | c-type cytochrome | - |
| H845_RS15910 () | 2417..3847 | + | 1431 | WP_010516195.1 | cbb3-type cytochrome c oxidase subunit I | - |
| H845_RS18890 () | 4454..5107 | + | 654 | WP_167331480.1 | c-type cytochrome | - |
| H845_RS15925 () | 5149..5340 | + | 192 | WP_010516191.1 | hypothetical protein | - |
| H845_RS15930 () | 5761..5991 | + | 231 | WP_010516188.1 | hypothetical protein | - |
| H845_RS15935 () | 5988..6368 | + | 381 | WP_010516186.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| H845_RS15940 () | 6480..6831 | + | 352 | Protein_8 | CopG family transcriptional regulator | - |
| H845_RS15945 () | 6807..7790 | + | 984 | WP_041250514.1 | tyrosine-type recombinase/integrase | - |
| H845_RS18895 () | 7898..8527 | + | 630 | WP_010516180.1 | AAA family ATPase | - |
| H845_RS18900 () | 8548..8769 | + | 222 | WP_070324352.1 | chromosome partitioning protein ParB | - |
| H845_RS18905 () | 8819..9847 | + | 1029 | WP_081749530.1 | replication initiator protein A | - |
| H845_RS18910 () | 10047..10826 | - | 780 | WP_035979553.1 | DUF4019 domain-containing protein | - |
| H845_RS15960 () | 10823..11407 | - | 585 | WP_010516174.1 | Tn3 family transposase TnpR_ISMex38 | Transposase |
| H845_RS15965 () | 11595..14523 | + | 2929 | Protein_15 | Tn3 family transposase TnpA_ISAli20 | Transposase |
| H845_RS15970 () | 14579..15058 | - | 480 | Protein_16 | hypothetical protein | VF |
| H845_RS15975 () | 15088..15720 | - | 633 | WP_157699281.1 | invasion associated locus B family protein | - |
| H845_RS15980 () | 16382..16651 | + | 270 | WP_025439948.1 | hypothetical protein | - |
| H845_RS15985 () | 16651..17058 | + | 408 | WP_025439949.1 | Rrf2 family transcriptional regulator | - |
| H845_RS15990 () | 17152..18246 | - | 1095 | WP_025439950.1 | Fic family protein | - |
| H845_RS15995 () | 18561..19229 | - | 669 | WP_025439951.1 | hypothetical protein | - |
| H845_RS16000 () | 19522..19914 | - | 393 | WP_007396299.1 | PIN domain nuclease | - |
| H845_RS16005 () | 19911..20105 | - | 195 | WP_010512461.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| H845_RS16010 () | 20170..20592 | - | 423 | WP_025439952.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| H845_RS16015 () | 20589..20840 | - | 252 | WP_025439953.1 | plasmid stabilization protein | Antitoxin Detail |
| H845_RS16020 () | 20926..21189 | - | 264 | WP_041250516.1 | toxin-antitoxin system HicB family antitoxin | - |
| H845_RS16025 () | 21186..21608 | - | 423 | WP_010517487.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| H845_RS16030 () | 21655..25026 | - | 3372 | WP_025439955.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| H845_RS16035 () | 25123..25452 | + | 330 | WP_081749532.1 | conjugal transfer protein TraD | - |
| H845_RS16040 () | 25547..25813 | + | 267 | WP_025439956.1 | conjugal transfer protein TraD | - |
| H845_RS16045 () | 25806..26309 | + | 504 | WP_025439957.1 | MucR family transcriptional regulator | - |
| H845_RS16050 () | 26612..26953 | - | 342 | WP_025439958.1 | BrnA antitoxin family protein | - |
| H845_RS18920 () | 26922..27218 | - | 297 | WP_081749534.1 | BrnT family toxin | - |
| H845_RS19940 () | 27358..27684 | - | 327 | WP_147318906.1 | hypothetical protein | - |
| H845_RS20175 () | 27683..27847 | + | 165 | WP_162838769.1 | hypothetical protein | - |
| H845_RS16065 () | 28214..29125 | - | 912 | WP_025439960.1 | isopenicillin N synthase family oxygenase | - |
| H845_RS16070 () | 29358..29762 | - | 405 | WP_007396285.1 | DUF2442 domain-containing protein | - |
| H845_RS16075 () | 29746..29958 | - | 213 | WP_019092610.1 | DUF4160 domain-containing protein | - |
| H845_RS16080 () | 30070..30471 | + | 402 | Protein_39 | IS1380 family transposase ISNha3 | Transposase |
| H845_RS16085 () | 30832..31356 | + | 525 | WP_117126065.1 | hypothetical protein | - |
| H845_RS20180 () | 31608..33518 | + | 1911 | Protein_41 | phospholipase D family protein | - |
| H845_RS16095 () | 33604..34626 | + | 1023 | WP_041247965.1 | IS110 family transposase ISMdi12 | Transposase |
| H845_RS19945 () | 34904..35047 | + | 144 | WP_157699282.1 | hypothetical protein | - |
| H845_RS16100 () | 35091..35477 | - | 387 | WP_025439964.1 | type II toxin-antitoxin system VapC family toxin | - |
| H845_RS16105 () | 35474..35719 | - | 246 | WP_010518373.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| H845_RS18925 () | 35740..36000 | - | 261 | WP_034931139.1 | type II toxin-antitoxin system HicA family toxin | - |
| H845_RS20185 () | 36073..36225 | + | 153 | WP_165165566.1 | hypothetical protein | - |
| H845_RS16110 () | 36255..36578 | - | 324 | WP_025439965.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| H845_RS16115 () | 36575..36793 | - | 219 | WP_025439966.1 | antitoxin MazE family protein | Antitoxin Detail |
| H845_RS18930 () | 37029..37355 | - | 327 | WP_117125944.1 | DUF2442 domain-containing protein | - |
| H845_RS16120 () | 37448..37963 | - | 516 | WP_010518057.1 | hypothetical protein | - |
| H845_RS20190 () | 37869..38186 | - | 318 | WP_167331481.1 | hypothetical protein | - |
| H845_RS16130 () | 38249..38434 | - | 186 | WP_010518059.1 | PilT protein | - |
| H845_RS16135 () | 38431..38688 | - | 258 | WP_019087450.1 | plasmid stabilization protein | - |
| H845_RS16140 () | 38786..39040 | - | 255 | WP_081749535.1 | hypothetical protein | - |
| H845_RS16145 () | 39117..39533 | - | 417 | WP_010518062.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| H845_RS18935 () | 39544..39723 | - | 180 | WP_010518064.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| H845_RS18940 () | 40500..41615 | - | 1116 | WP_167331479.1 | IS110 family transposase ISSfr2 | Transposase |
| H845_RS16155 () | 41993..44968 | - | 2976 | WP_025439943.1 | Tn3 family transposase TnpA_ISAli20 | Transposase |
| H845_RS16160 () | 45108..45692 | + | 585 | WP_010516174.1 | Tn3 family transposase TnpR_ISMex38 | Transposase |
| H845_RS18945 () | 45689..46468 | + | 780 | WP_035979553.1 | DUF4019 domain-containing protein | - |
| H845_RS16170 () | 46596..47861 | + | 1266 | Protein_62 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| H845_RS18950 () | 47858..48412 | + | 555 | Protein_63 | 16S rRNA endonuclease CdiA | VF |
| H845_RS20195 () | 48692..49096 | + | 405 | Protein_64 | 16S rRNA endonuclease CdiA | VF |
| H845_RS20200 () | 49250..49789 | + | 540 | Protein_65 | 16S rRNA endonuclease CdiA | VF |
| H845_RS20205 () | 49880..50827 | + | 948 | Protein_66 | 16S rRNA endonuclease CdiA | VF |
| H845_RS20210 () | 51035..51835 | + | 801 | Protein_67 | 16S rRNA endonuclease CdiA | VF |
| H845_RS20215 () | 52025..52249 | + | 225 | Protein_68 | 16S rRNA endonuclease CdiA | VF |
| H845_RS18975 () | 53729..55429 | + | 1701 | Protein_69 | 16S rRNA endonuclease CdiA | VF |
| H845_RS18980 () | 55568..57020 | + | 1453 | Protein_70 | 16S rRNA endonuclease CdiA | VF |
| H845_RS16185 () | 57684..58520 | - | 837 | WP_038507813.1 | IS5 family transposase IS1031A | Transposase |
| H845_RS19980 () | 58847..59326 | + | 480 | WP_147318802.1 | hypothetical protein | - |
| H845_RS18210 () | 59545..61560 | + | 2016 | WP_025439973.1 | hemagglutinin repeat-containing protein | - |
| H845_RS19985 () | 61547..62170 | + | 624 | WP_146220231.1 | carboxypeptidase regulatory-like domain-containing protein | - |
| H845_RS16195 () | 62498..63430 | - | 933 | WP_181417552.1 | LysR family transcriptional regulator | - |
| H845_RS16200 () | 63507..64220 | + | 714 | WP_041250523.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| H845_RS16205 () | 64217..65230 | + | 1014 | WP_025439976.1 | zinc-binding dehydrogenase | - |
| H845_RS16210 () | 65232..66341 | + | 1110 | WP_025439977.1 | NADH:flavin oxidoreductase/NADH oxidase | - |
| H845_RS16220 () | 66701..67887 | + | 1187 | WP_089179083.1 | IS3 family transposase ISGxy1 | Transposase |
| H845_RS16225 () | 68033..69226 | - | 1194 | WP_025439978.1 | Fic family protein | - |
| H845_RS16230 () | 69560..71134 | - | 1575 | WP_025439979.1 | hypothetical protein | VF |
| H845_RS16240 () | 71612..71932 | + | 321 | WP_025439981.1 | WGR domain-containing protein | - |
| H845_RS16245 () | 71929..72564 | + | 636 | WP_025439982.1 | IS91 family transposase ISTha3 | Transposase |
| H845_RS16250 () | 72610..72864 | + | 255 | WP_010517099.1 | ribbon-helix-helix domain-containing protein | - |
| H845_RS20220 () | 72868..73100 | + | 233 | Protein_85 | PIN domain nuclease | - |
| H845_RS18995 () | 73350..74009 | + | 660 | WP_010517102.1 | hypothetical protein | VF |
| H845_RS19000 () | 74037..74294 | + | 258 | WP_081500038.1 | hypothetical protein | - |
| H845_RS16255 () | 74335..75390 | - | 1056 | WP_025439983.1 | replication initiator protein A | - |
| H845_RS19005 () | 75777..76892 | + | 1116 | WP_167331479.1 | IS110 family transposase ISSfr2 | Transposase |
| H845_RS19010 () | 77781..77954 | + | 174 | WP_010505173.1 | DUF4160 domain-containing protein | - |
| H845_RS16270 () | 77944..78351 | + | 408 | WP_010517879.1 | DUF2442 domain-containing protein | - |
| H845_RS16275 () | 78663..78905 | + | 243 | WP_010517881.1 | BrnA antitoxin family protein | - |
| H845_RS16280 () | 79298..79804 | - | 507 | WP_010517884.1 | MucR family transcriptional regulator | - |
| H845_RS16285 () | 79797..80063 | - | 267 | WP_010517886.1 | conjugal transfer protein TraD | - |
| H845_RS16290 () | 80128..80487 | - | 360 | WP_025439939.1 | conjugal transfer protein TraD | - |
| H845_RS16295 () | 80584..83670 | + | 3087 | WP_025439940.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| H845_RS16300 () | 83725..83919 | + | 195 | WP_010516209.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| H845_RS16305 () | 84048..84980 | - | 933 | WP_025439941.1 | IS5 family transposase ISPko1 | Transposase |
| H845_RS16310 () | 85527..86090 | + | 564 | WP_010516204.1 | DsrE family protein | - |
| H845_RS16315 () | 86146..87141 | + | 996 | WP_010516202.1 | substrate-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|