MGE detailed information
MGE type: Conjugative plasmid MGE length: 75901 bp
Accession: NZ_AP028096 Location: 1..75901 Organism: Escherichia coli strain JNE132847 Replicon: plasmid pJNE132847_2
Accession: NZ_AP028096 Location: 1..75901 Organism: Escherichia coli strain JNE132847 Replicon: plasmid pJNE132847_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JE76HU_RS26720 (1) | 1..858 | + | 858 | WP_016240488.1 | incFII family plasmid replication initiator RepA | - |
| JE76HU_RS26725 (1771) | 1771..2040 | + | 270 | WP_033802255.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| JE76HU_RS26730 (2040) | 2040..2318 | + | 279 | WP_250110461.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| JE76HU_RS26735 (2641) | 2641..3219 | + | 579 | WP_235802409.1 | hypothetical protein | - |
| JE76HU_RS26740 (3573) | 3573..3908 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| JE76HU_RS26745 (4246) | 4246..5226 | + | 981 | WP_033807854.1 | plasmid segregation protein ParM | - |
| JE76HU_RS26750 (5229) | 5229..5651 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| JE76HU_RS26755 (5675) | 5675..5896 | + | 222 | WP_113263694.1 | hypothetical protein | - |
| JE76HU_RS26760 (5994) | 5994..7010 | + | 1017 | WP_023278197.1 | IS110 family transposase ISShdy1 | Transposase |
| JE76HU_RS26765 (7557) | 7557..7631 | + | 75 | Protein_9 | hypothetical protein | - |
| JE76HU_RS26770 (7741) | 7741..8643 | + | 903 | WP_077776040.1 | DUF1281 domain-containing protein | - |
| JE76HU_RS26775 (8640) | 8640..8882 | + | 243 | WP_286352595.1 | hypothetical protein | - |
| JE76HU_RS26780 (8980) | 8980..9996 | + | 1017 | WP_000219394.1 | IS110 family transposase ISShdy1 | Transposase |
| JE76HU_RS26785 (10543) | 10543..10617 | + | 75 | Protein_13 | hypothetical protein | - |
| JE76HU_RS26790 (10693) | 10693..11376 | + | 684 | WP_024249881.1 | DNA methylase | - |
| JE76HU_RS26795 (11377) | 11377..11598 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| JE76HU_RS26800 (11528) | 11528..12046 | + | 519 | WP_235802552.1 | DUF1380 family protein | - |
| JE76HU_RS26805 (12091) | 12091..12861 | + | 771 | WP_033802143.1 | hypothetical protein | - |
| JE76HU_RS26810 (13274) | 13274..13699 | + | 426 | WP_001198900.1 | antirestriction protein | - |
| JE76HU_RS26815 (13746) | 13746..14168 | + | 423 | WP_000271688.1 | DUF1380 family protein | - |
| JE76HU_RS26820 (14165) | 14165..14356 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| JE76HU_RS26825 (15323) | 15323..15553 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| JE76HU_RS26830 (15605) | 15605..16966 | + | 1362 | WP_113263701.1 | DUF3560 domain-containing protein | - |
| JE76HU_RS26835 (17013) | 17013..17576 | + | 564 | WP_016240496.1 | class I SAM-dependent methyltransferase | - |
| JE76HU_RS26840 (17662) | 17662..18105 | - | 444 | Protein_24 | hypothetical protein | - |
| JE76HU_RS26845 (18407) | 18407..18934 | + | 528 | WP_134888794.1 | single-stranded DNA-binding protein | - |
| JE76HU_RS26850 (18991) | 18991..19224 | + | 234 | WP_113334342.1 | DUF905 domain-containing protein | - |
| JE76HU_RS26855 (19283) | 19283..21241 | + | 1959 | WP_286352596.1 | ParB/RepB/Spo0J family partition protein | - |
| JE76HU_RS26860 (21296) | 21296..21730 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| JE76HU_RS26865 (21727) | 21727..22489 | + | 763 | Protein_29 | plasmid SOS inhibition protein A | - |
| - (22458) | 22458..22682 | + | 225 | NuclAT_0 | - | - |
| - (22458) | 22458..22682 | + | 225 | NuclAT_0 | - | - |
| - (22458) | 22458..22682 | + | 225 | NuclAT_0 | - | - |
| - (22458) | 22458..22682 | + | 225 | NuclAT_0 | - | - |
| JE76HU_RS26870 (22668) | 22668..22817 | + | 150 | Protein_30 | plasmid maintenance protein Mok | - |
| JE76HU_RS26875 (22759) | 22759..22884 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| JE76HU_RS26880 (23185) | 23185..23481 | - | 297 | Protein_32 | hypothetical protein | - |
| JE76HU_RS26885 (23781) | 23781..24077 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| JE76HU_RS26890 (24188) | 24188..25009 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| JE76HU_RS26895 (25306) | 25306..25908 | - | 603 | WP_000243713.1 | hypothetical protein | VF |
| JE76HU_RS26900 (26231) | 26231..26614 | + | 384 | WP_001354030.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JE76HU_RS26905 (26808) | 26808..27479 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| JE76HU_RS26910 (27616) | 27616..27843 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| JE76HU_RS26915 (27876) | 27876..28235 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| JE76HU_RS26920 (28250) | 28250..28561 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| JE76HU_RS26925 (28583) | 28583..29149 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| JE76HU_RS26930 (29136) | 29136..29864 | + | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| JE76HU_RS26935 (29864) | 29864..31315 | + | 1452 | WP_000146675.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| JE76HU_RS26940 (31305) | 31305..31871 | + | 567 | WP_000896599.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| JE76HU_RS26945 (31858) | 31858..32178 | + | 321 | WP_001057307.1 | conjugal transfer protein TrbD | - |
| JE76HU_RS26950 (32175) | 32175..32690 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JE76HU_RS26955 (32825) | 32825..33046 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| JE76HU_RS26965 (34456) | 34456..34788 | + | 333 | Protein_49 | hypothetical protein | - |
| JE76HU_RS26970 (34781) | 34781..35254 | + | 474 | WP_000549568.1 | hypothetical protein | - |
| JE76HU_RS26975 (35334) | 35334..35552 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| JE76HU_RS26980 (35580) | 35580..35927 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| JE76HU_RS26985 (36053) | 36053..38683 | + | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| JE76HU_RS26990 (38680) | 38680..39066 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| JE76HU_RS26995 (39063) | 39063..39695 | + | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| JE76HU_RS27000 (39692) | 39692..40684 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| JE76HU_RS27005 (40714) | 40714..41019 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| JE76HU_RS27010 (41028) | 41028..41666 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JE76HU_RS27015 (41663) | 41663..43513 | + | 1851 | WP_032301714.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JE76HU_RS27020 (43540) | 43540..43797 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| JE76HU_RS27025 (43790) | 43790..44533 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JE76HU_RS27030 (44547) | 44547..44888 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| JE76HU_RS27035 (44869) | 44869..45204 | - | 336 | WP_001620807.1 | hypothetical protein | - |
| JE76HU_RS27040 (45285) | 45285..45569 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JE76HU_RS27045 (45556) | 45556..46101 | + | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JE76HU_RS27050 (46031) | 46031..46378 | + | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| JE76HU_RS27055 (46359) | 46359..46751 | + | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| JE76HU_RS27060 (46738) | 46738..48111 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| JE76HU_RS27065 (48108) | 48108..50933 | + | 2826 | WP_113479637.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| JE76HU_RS27070 (50930) | 50930..51439 | + | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
| JE76HU_RS27075 (51453) | 51453..52184 | + | 732 | WP_012881123.1 | conjugal transfer complement resistance protein TraT | - |
| JE76HU_RS27080 (52387) | 52387..53124 | + | 738 | WP_012881122.1 | hypothetical protein | - |
| JE76HU_RS27085 (53175) | 53175..55436 | + | 2262 | WP_286352593.1 | type IV conjugative transfer system coupling protein TraD | - |
| JE76HU_RS27090 (55436) | 55436..60706 | + | 5271 | WP_286352594.1 | Multifunctional conjugation protein TraI | Relaxase |
| JE76HU_RS27095 (60726) | 60726..61472 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| JE76HU_RS27100 (61527) | 61527..62087 | + | 561 | WP_033807966.1 | fertility inhibition protein FinO | - |
| JE76HU_RS27105 (62219) | 62219..62431 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| JE76HU_RS27110 (62677) | 62677..63138 | + | 462 | WP_001233850.1 | thermonuclease family protein | - |
| JE76HU_RS27115 (63184) | 63184..63393 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| JE76HU_RS27120 (63431) | 63431..64090 | + | 660 | WP_113465560.1 | DUF2726 domain-containing protein | - |
| JE76HU_RS27125 (64014) | 64014..66872 | - | 2859 | Protein_81 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JE76HU_RS27130 (66920) | 66920..67624 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JE76HU_RS27135 (68042) | 68042..68626 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| JE76HU_RS27140 (68626) | 68626..69864 | - | 1239 | WP_113263699.1 | macrolide resistance MFS transporter Mrx(A) | - |
| JE76HU_RS27145 (69861) | 69861..70766 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| JE76HU_RS27150 (70888) | 70888..71592 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JE76HU_RS27155 (71639) | 71639..71815 | - | 177 | WP_200922282.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JE76HU_RS27160 (71979) | 71979..72536 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| JE76HU_RS27165 (72719) | 72719..73579 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| JE76HU_RS27170 (74386) | 74386..74661 | + | 276 | WP_072276260.1 | hypothetical protein | - |
| - (74804) | 74804..74863 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (74804) | 74804..74863 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (74804) | 74804..74863 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (74804) | 74804..74863 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| JE76HU_RS27175 (74908) | 74908..75057 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| JE76HU_RS27180 (75342) | 75342..75590 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| JE76HU_RS27185 (75705) | 75705..75889 | + | 185 | Protein_93 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|