NZ_AP0279721..169195

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 169195 bp
Accession: NZ_AP027972        Location: 1..169195         Organism: Escherichia coli strain VE-V10-F       Replicon: plasmid pVE-V10-F_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QQK73_RS23915 (1) 1..978 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
QQK73_RS23920 (1263) 1263..2003 - 741 WP_001066954.1 tyrosine-type recombinase/integrase -
QQK73_RS23925 (2124) 2124..2312 - 189 WP_001324033.1 hypothetical protein -
QQK73_RS23930 (2686) 2686..3587 - 902 Protein_3 antimicrobial resistance protein Mig-14 -
QQK73_RS23935 (3656) 3656..4765 - 1110 WP_000771475.1 SDR family oxidoreductase -
QQK73_RS23940 (5198) 5198..6151 - 954 WP_000280980.1 Protease 7 VF
QQK73_RS23945 (7439) 7439..7618 - 180 Protein_6 integrase core domain-containing protein -
QQK73_RS23950 (7757) 7757..8956 + 1200 Protein_7 IS3 family transposase IS629 Transposase
QQK73_RS23955 (9104) 9104..9429 - 326 Protein_8 IS3 family transposase ISLad1 Transposase
QQK73_RS23960 (9475) 9475..9815 + 341 Protein_9 IS3 family transposase -
QQK73_RS23965 (10410) 10410..11597 + 1188 WP_000928804.1 efflux RND transporter periplasmic adaptor subunit -
QQK73_RS23970 (11594) 11594..13534 + 1941 WP_000733250.1 Macrolide export ATP-binding/permease protein MacB VF
QQK73_RS23975 (13538) 13538..14908 + 1371 WP_001312828.1 efflux transporter outer membrane subunit -
QQK73_RS23980 (15382) 15382..15576 + 195 Protein_13 IS200/IS605-like element IS200C family transposase -
QQK73_RS23985 (15705) 15705..16646 - 942 WP_000974762.1 hypothetical protein -
QQK73_RS23990 (16881) 16881..18270 - 1390 Protein_15 ISNCY family transposase ISKpn21 Transposase
QQK73_RS23995 (18580) 18580..18729 - 150 Protein_16 IS3 family transposase IS2 Transposase
QQK73_RS24000 (18907) 18907..20100 - 1194 WP_000450494.1 GTP-binding protein -
QQK73_RS24005 (21342) 21342..22079 - 738 Protein_18 IS3 family transposase IS2 Transposase
QQK73_RS24010 (22132) 22132..23294 + 1163 WP_085947598.1 IS3 family transposase ISEc17 Transposase
QQK73_RS24015 (23311) 23311..23831 - 521 Protein_20 IS3 family transposase IS2 Transposase
QQK73_RS24020 (24456) 24456..24749 + 294 WP_000738422.1 increased serum survival lipoprotein Iss -
QQK73_RS24025 (24807) 24807..25006 - 200 Protein_22 lysis protein -
QQK73_RS24030 (25560) 25560..26584 + 1025 Protein_23 integrase core domain-containing protein -
QQK73_RS24035 (27895) 27895..29010 + 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
QQK73_RS24040 (29150) 29150..32809 + 3660 WP_001389363.1 Multidrug efflux ATP-binding/permease protein VF
QQK73_RS24045 (32913) 32913..34142 + 1230 WP_000933678.1 Enterochelin esterase VF
QQK73_RS24050 (34227) 34227..35183 + 957 WP_000271274.1 Ferri-bacillibactin esterase BesA VF
QQK73_RS24055 (35228) 35228..37405 - 2178 WP_001222185.1 Ferric enterobactin receptor VF
QQK73_RS24060 (38270) 38270..39304 - 1035 WP_001190234.1 3-deoxy-7-phosphoheptulonate synthase -
QQK73_RS24065 (39485) 39485..39786 + 302 Protein_30 hypothetical protein -
QQK73_RS24070 (39864) 39864..40172 - 309 WP_000377483.1 DUF6404 family protein -
QQK73_RS24075 (40325) 40325..40450 - 126 Protein_32 type II toxin-antitoxin system toxin YacB -
QQK73_RS24080 (40450) 40450..40718 - 269 Protein_33 type II toxin-antitoxin system antitoxin YacA -
QQK73_RS24085 (41329) 41329..42603 + 1275 WP_000489609.1 HlyD family secretion protein -
QQK73_RS24090 (42596) 42596..44146 + 1551 Protein_35 ABC transporter transmembrane domain-containing protein -
QQK73_RS24095 (44187) 44187..44891 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
QQK73_RS24100 (44957) 44957..46469 + 1513 Protein_37 Tn3 family transposase TnpA_TnAs1 Transposase
QQK73_RS24105 (46527) 46527..46769 + 243 WP_000844627.1 transposase -
QQK73_RS24110 (46801) 46801..47451 - 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
QQK73_RS24115 (47557) 47557..48756 + 1200 WP_000804064.1 Tetracycline resistance protein, class C ARG
QQK73_RS24120 (48788) 48788..49672 - 885 WP_000058717.1 EamA family transporter -
QQK73_RS24125 (49810) 49810..50202 - 393 WP_001351729.1 isochorismatase family cysteine hydrolase -
QQK73_RS24130 (50206) 50206..51957 + 1752 Protein_43 Tn3 family transposase TnpA_TnAs1 Transposase
QQK73_RS24135 (52815) 52815..53159 + 345 WP_001553768.1 hypothetical protein -
QQK73_RS24140 (53340) 53340..54455 - 1116 Protein_45 IS91 family transposase IS91 Transposase
QQK73_RS24145 (54455) 54455..54820 - 366 WP_000124098.1 hypothetical protein -
QQK73_RS24150 (54942) 54942..56093 - 1152 WP_001442799.1 IS30 family transposase IS30D Transposase
QQK73_RS24155 (56161) 56161..56418 - 258 Protein_48 IS3 family transposase IS911 Transposase
QQK73_RS24160 (56697) 56697..56888 - 192 Protein_49 IS91 family transposase -
QQK73_RS24165 (57059) 57059..61192 + 4134 WP_001080137.1 Temperature-sensitive hemagglutinin tsh autotransporter VF
QQK73_RS24170 (61301) 61301..61693 + 393 Protein_51 peptide deformylase -
QQK73_RS24175 (61740) 61740..62006 - 267 Protein_52 Tn3 family transposase TnpR_TnEc1 Transposase
QQK73_RS24180 (62046) 62046..63583 - 1538 Protein_53 IS66 family transposase ISEc8 Transposase
QQK73_RS24185 (63633) 63633..63980 - 348 WP_000612591.1 IS66 family transposase ISEc8 Transposase
QQK73_RS24190 (63977) 63977..64357 - 381 WP_001171523.1 IS66 family transposase ISEc8 Transposase
QQK73_RS24195 (64433) 64433..65413 - 981 WP_001017346.1 NAD(P)-binding domain-containing protein -
QQK73_RS24200 (65410) 65410..65679 - 270 WP_000379710.1 SemiSWEET transporter -
QQK73_RS24205 (65681) 65681..66085 - 405 WP_001389361.1 hypothetical protein -
QQK73_RS24210 (66057) 66057..66500 - 444 WP_001323891.1 dehydrogenase -
QQK73_RS24215 (66619) 66619..66855 + 237 WP_001323890.1 colicin V immunity protein -
QQK73_RS24220 (66833) 66833..67144 + 312 WP_001259758.1 colicin V -
QQK73_RS24225 (67314) 67314..67877 - 564 Protein_62 Heterocyst differentiation ATP-binding protein HepA VF
QQK73_RS24230 (67943) 67943..68647 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
QQK73_RS24235 (69095) 69095..70108 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
QQK73_RS24240 (70264) 70264..70737 + 474 WP_004201280.1 Dihydrofolate reductase type 1 ARG
QQK73_RS24245 (70807) 70807..71511 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
QQK73_RS24250 (71565) 71565..71879 + 315 Protein_67 Tn3 family transposase TnpR_TnAs3 Transposase
QQK73_RS24255 (71882) 71882..74848 + 2967 WP_284330367.1 Tn3 family transposase TnpA_ISPa38 Transposase
QQK73_RS24260 (74927) 74927..75931 + 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
QQK73_RS24265 (76203) 76203..76289 - 87 Protein_70 Arm DNA-binding domain-containing protein -
QQK73_RS24270 (76619) 76619..77434 + 816 WP_001043260.1 Dihydropteroate synthase ARG
QQK73_RS24275 (77495) 77495..78298 + 804 WP_001082320.1 Aminoglycoside 3'-phosphotransferase ARG
QQK73_RS24280 (78298) 78298..79134 + 837 WP_000480972.1 hypothetical protein ARG
QQK73_RS24285 (79365) 79365..80225 - 861 WP_000027057.1 Beta-lactamase TEM ARG
QQK73_RS24290 (80408) 80408..80965 - 558 WP_001235713.1 Tn3 family transposase TnpR_Tn3 Transposase
QQK73_RS24295 (81129) 81129..84134 + 3006 WP_001143760.1 Tn3 family transposase TnpA_Tn3 Transposase
QQK73_RS24300 (84207) 84207..85598 - 1392 WP_001493761.1 ISKra4 family transposase ISKpn19 Transposase
QQK73_RS24305 (85635) 85635..86207 - 573 WP_001493762.1 Tn3 family transposase TnpR_ISPa40 Transposase
QQK73_RS24310 (86344) 86344..86889 - 546 WP_001493763.1 plasmid pRiA4b ORF-3 family protein -
QQK73_RS24315 (87027) 87027..87392 - 366 Protein_80 plasmid replication initiator RepA -
QQK73_RS24320 (87385) 87385..87867 - 483 WP_001273588.1 hypothetical protein -
QQK73_RS24325 (87860) 87860..87907 - 48 WP_229471593.1 hypothetical protein -
QQK73_RS24330 (87898) 87898..88149 + 252 WP_223195197.1 replication protein RepA -
QQK73_RS24335 (88166) 88166..88423 - 258 WP_000083845.1 replication regulatory protein RepA -
QQK73_RS24340 (88707) 88707..88856 - 150 WP_001312851.1 Hok/Gef family protein Toxin Detail
- (88900) 88900..88961 + 62 NuclAT_1 - Antitoxin Detail
- (88900) 88900..88961 + 62 NuclAT_1 - Antitoxin Detail
- (88900) 88900..88961 + 62 NuclAT_1 - Antitoxin Detail
- (88900) 88900..88961 + 62 NuclAT_1 - Antitoxin Detail
QQK73_RS24345 (89217) 89217..89291 - 75 Protein_86 endonuclease -
QQK73_RS24350 (89537) 89537..89749 - 213 WP_001299730.1 ANR family transcriptional regulator -
QQK73_RS24355 (89885) 89885..90445 - 561 WP_000139315.1 fertility inhibition protein FinO -
QQK73_RS24360 (90548) 90548..91408 - 861 WP_000704513.1 putative protein YcjY VF
QQK73_RS24365 (91467) 91467..92213 - 747 WP_284330307.1 conjugal transfer pilus acetylase TraX -
QQK73_RS24370 (92233) 92233..97503 - 5271 WP_286627209.1 Multifunctional conjugation protein TraI Relaxase
QQK73_RS24375 (97585) 97585..97812 + 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
QQK73_RS24380 (97812) 97812..98210 + 399 WP_000911313.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
QQK73_RS24385 (98219) 98219..99853 - 1635 Protein_94 type IV conjugative transfer system coupling protein TraD -
QQK73_RS24390 (100162) 100162..100893 - 732 WP_023565183.1 conjugal transfer complement resistance protein TraT -
QQK73_RS24395 (100925) 100925..101422 - 498 WP_000605857.1 entry exclusion protein -
QQK73_RS24400 (101438) 101438..104260 - 2823 WP_001007018.1 conjugal transfer mating-pair stabilization protein TraG -
QQK73_RS24405 (104257) 104257..104994 - 738 Protein_98 conjugal transfer protein TraH -
QQK73_RS24410 (105297) 105297..105683 - 387 WP_000099691.1 type-F conjugative transfer system protein TrbI -
QQK73_RS24415 (105680) 105680..108307 - 2628 WP_001064245.1 type IV secretion system protein TraC -
QQK73_RS24420 (108467) 108467..108688 - 222 WP_001278689.1 conjugal transfer protein TraR -
QQK73_RS24425 (108823) 108823..109338 - 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
QQK73_RS24430 (109335) 109335..109586 - 252 WP_001038342.1 conjugal transfer protein TrbG -
QQK73_RS24435 (109598) 109598..109795 - 198 WP_024179215.1 conjugal transfer protein TrbD -
QQK73_RS24440 (109782) 109782..110372 - 591 WP_000002787.1 conjugal transfer pilus-stabilizing protein TraP -
QQK73_RS24445 (110362) 110362..111789 - 1428 WP_000146684.1 F-type conjugal transfer pilus assembly protein TraB -
QQK73_RS24450 (111789) 111789..112517 - 729 WP_001230813.1 type-F conjugative transfer system secretin TraK -
QQK73_RS24455 (112504) 112504..113070 - 567 WP_000399790.1 type IV conjugative transfer system protein TraE -
QQK73_RS24460 (113092) 113092..113403 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
QQK73_RS24465 (113418) 113418..113783 - 366 WP_000340282.1 type IV conjugative transfer system pilin TraA -
QQK73_RS24470 (113826) 113826..114041 - 216 WP_001352842.1 conjugal transfer relaxosome protein TraY -
QQK73_RS24475 (114177) 114177..114824 - 648 WP_000332520.1 conjugal transfer transcriptional regulator TraJ -
QQK73_RS24480 (115016) 115016..115399 - 384 WP_001063020.1 conjugal transfer relaxosome DNA-binding protein TraM -
QQK73_RS24485 (115739) 115739..116341 + 603 WP_077248356.1 hypothetical protein VF
QQK73_RS24490 (116636) 116636..117457 - 822 WP_001234475.1 DUF932 domain-containing protein -
QQK73_RS24495 (117576) 117576..117863 - 288 WP_000107546.1 hypothetical protein -
QQK73_RS24500 (117888) 117888..118094 - 207 WP_000547965.1 hypothetical protein -
QQK73_RS24505 (118164) 118164..118460 + 297 Protein_118 hypothetical protein -
QQK73_RS24510 (118761) 118761..118886 - 126 WP_096937776.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
QQK73_RS24515 (118828) 118828..118977 - 150 Protein_120 DUF5431 family protein -
- (118984) 118984..119182 - 199 NuclAT_0 - Antitoxin Detail
- (118984) 118984..119182 - 199 NuclAT_0 - Antitoxin Detail
- (118984) 118984..119182 - 199 NuclAT_0 - Antitoxin Detail
- (118984) 118984..119182 - 199 NuclAT_0 - Antitoxin Detail
QQK73_RS24520 (119151) 119151..119913 - 763 Protein_121 plasmid SOS inhibition protein A -
QQK73_RS24525 (119910) 119910..120344 - 435 WP_000845928.1 conjugation system SOS inhibitor PsiB -
QQK73_RS24530 (120399) 120399..122357 - 1959 WP_029487628.1 ParB/RepB/Spo0J family partition protein -
QQK73_RS24535 (122423) 122423..122527 - 105 Protein_124 DUF905 family protein -
QQK73_RS24540 (122613) 122613..123358 - 746 Protein_125 IS21-like element ISEc12 family helper ATPase IstB -
QQK73_RS24545 (123373) 123373..124889 - 1517 Protein_126 IS21-like element ISEc12 family transposase -
QQK73_RS24550 (125103) 125103..125237 - 135 Protein_127 DUF905 family protein -
QQK73_RS24555 (125294) 125294..125833 - 540 WP_000290801.1 single-stranded DNA-binding protein -
QQK73_RS24560 (126582) 126582..126773 - 192 WP_001027495.1 hypothetical protein -
QQK73_RS24565 (126770) 126770..127192 - 423 WP_000271685.1 DUF1380 family protein -
QQK73_RS24570 (127239) 127239..127664 - 426 WP_001198918.1 antirestriction protein -
QQK73_RS24575 (128077) 128077..128853 - 777 WP_001005035.1 hypothetical protein -
QQK73_RS24580 (128899) 128899..129453 - 555 WP_077248347.1 DUF1380 family protein -
QQK73_RS24585 (129347) 129347..129568 - 222 WP_001104870.1 hypothetical protein -
QQK73_RS24590 (129569) 129569..130252 - 684 WP_000085939.1 DNA methylase -
QQK73_RS24595 (130329) 130329..130634 - 306 WP_010891292.1 hypothetical protein -
QQK73_RS24600 (130638) 130638..131539 - 902 Protein_137 DUF1281 domain-containing protein -
QQK73_RS24605 (132449) 132449..133420 - 972 WP_000817035.1 ParB/RepB/Spo0J family plasmid partition protein -
QQK73_RS24610 (133420) 133420..134586 - 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
QQK73_RS24615 (135174) 135174..135929 - 756 WP_000852146.1 replication initiation protein RepE -
QQK73_RS24620 (136681) 136681..137487 - 807 WP_000016982.1 site-specific integrase -
QQK73_RS24625 (137488) 137488..137793 - 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
QQK73_RS24630 (137795) 137795..138013 - 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
QQK73_RS24635 (138605) 138605..139093 + 489 WP_011254646.1 hypothetical protein -
QQK73_RS24640 (139127) 139127..140260 - 1134 WP_000545984.1 DUF3800 domain-containing protein -
QQK73_RS24645 (140427) 140427..141200 - 774 WP_000905949.1 hypothetical protein -
QQK73_RS24650 (141213) 141213..141713 - 501 WP_000528932.1 HEPN family nuclease -
QQK73_RS24655 (141978) 141978..142208 + 231 WP_001261278.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
QQK73_RS24660 (142205) 142205..142621 + 417 WP_001034046.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
QQK73_RS24665 (142666) 142666..146460 - 3795 WP_001144731.1 hypothetical protein -
QQK73_RS24670 (146841) 146841..147071 + 231 WP_001261286.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
QQK73_RS24675 (147068) 147068..147484 + 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
QQK73_RS24680 (147559) 147559..149124 + 1566 WP_001128474.1 AAA family ATPase -
QQK73_RS24685 (149109) 149109..150131 + 1023 WP_000361402.1 helicase UvrD -
QQK73_RS24695 (151462) 151462..153663 - 2202 WP_000973519.1 Ferric aerobactin receptor VF
QQK73_RS24700 (153689) 153689..155022 - 1334 Protein_157 L-lysine N6-monooxygenase VF
QQK73_RS24705 (155019) 155019..156761 - 1743 WP_001015721.1 Aerobactin synthase VF
QQK73_RS24710 (156761) 156761..157708 - 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase VF
QQK73_RS24715 (157709) 157709..159433 - 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
QQK73_RS24720 (159569) 159569..160762 + 1194 WP_000095526.1 MFS transporter -
QQK73_RS24725 (161142) 161142..161522 - 381 WP_001318207.1 fluoride efflux transporter CrcB -
QQK73_RS24730 (161863) 161863..162276 - 414 Protein_163 phosphopyruvate hydratase -
QQK73_RS24735 (162765) 162765..163622 - 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
QQK73_RS24740 (163619) 163619..164476 - 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
QQK73_RS24745 (164473) 164473..165300 - 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
QQK73_RS24750 (165300) 165300..166214 - 915 WP_000949004.1 Putative metal ABC transporter substrate-binding protein Hpf VF
QQK73_RS24755 (166570) 166570..167267 + 698 WP_223155668.1 IS1 family transposase IS1S Transposase
QQK73_RS24760 (167447) 167447..167960 - 514 Protein_169 DUF4113 domain-containing protein -
QQK73_RS24765 (168021) 168021..168125 - 105 Protein_170 AAA family ATPase -
QQK73_RS24770 (168127) 168127..168450 - 324 Protein_171 IS21 family transposase IS21 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance