MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 81505 bp
Accession: NZ_AP027958 Location: 1..81505 Organism: Escherichia coli strain VE-T10 Replicon: plasmid pVE-T10_1
Accession: NZ_AP027958 Location: 1..81505 Organism: Escherichia coli strain VE-T10 Replicon: plasmid pVE-T10_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQK14_RS23785 (1) | 1..756 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QQK14_RS23790 (1344) | 1344..2510 | + | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| QQK14_RS23795 (2510) | 2510..3481 | + | 972 | WP_000817035.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QQK14_RS23800 (4219) | 4219..5120 | + | 902 | Protein_3 | DUF1281 domain-containing protein | - |
| QQK14_RS23805 (5124) | 5124..5429 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| QQK14_RS23810 (5506) | 5506..6189 | + | 684 | WP_000085939.1 | DNA methylase | - |
| QQK14_RS23815 (6190) | 6190..6411 | + | 222 | WP_001104870.1 | hypothetical protein | - |
| QQK14_RS23820 (6305) | 6305..6859 | + | 555 | WP_077248347.1 | DUF1380 family protein | - |
| QQK14_RS23825 (6905) | 6905..7681 | + | 777 | WP_001005035.1 | hypothetical protein | - |
| QQK14_RS23830 (8094) | 8094..8519 | + | 426 | WP_001198918.1 | antirestriction protein | - |
| QQK14_RS23835 (8566) | 8566..8988 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| QQK14_RS23840 (8985) | 8985..9176 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QQK14_RS23845 (9146) | 9146..9655 | - | 510 | WP_071600123.1 | hypothetical protein | - |
| QQK14_RS23850 (9973) | 9973..10512 | + | 540 | WP_000290801.1 | single-stranded DNA-binding protein | - |
| QQK14_RS23855 (10569) | 10569..10802 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| QQK14_RS23860 (10868) | 10868..12034 | + | 1167 | Protein_15 | type IV secretion system DNA-binding domain-containing protein | - |
| QQK14_RS23865 (12032) | 12032..12646 | + | 615 | Protein_16 | conjugal transfer pilus acetylase TraX | - |
| QQK14_RS23870 (12701) | 12701..13261 | + | 561 | WP_000139310.1 | fertility inhibition protein FinO | - |
| QQK14_RS23875 (13396) | 13396..13608 | + | 213 | WP_001541896.1 | ANR family transcriptional regulator | - |
| - (13950) | 13950..14011 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (13950) | 13950..14011 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (13950) | 13950..14011 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (13950) | 13950..14011 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| QQK14_RS23880 (14055) | 14055..14204 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| QQK14_RS23885 (14472) | 14472..14729 | + | 258 | WP_001541895.1 | replication regulatory protein RepA | - |
| QQK14_RS23890 (14961) | 14961..15035 | + | 75 | WP_061357229.1 | RepA leader peptide Tap | - |
| QQK14_RS23895 (15028) | 15028..15885 | + | 858 | WP_039002220.1 | incFII family plasmid replication initiator RepA | - |
| QQK14_RS23900 (16851) | 16851..17102 | + | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| QQK14_RS23905 (17099) | 17099..17386 | + | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QQK14_RS23910 (17461) | 17461..17649 | - | 189 | Protein_25 | IS3 family transposase | - |
| QQK14_RS23915 (17683) | 17683..19196 | - | 1514 | Protein_26 | Tn3-like element TnAs1 family transposase | - |
| QQK14_RS23920 (19262) | 19262..19963 | + | 702 | Protein_27 | IS6-like element IS26 family transposase | - |
| QQK14_RS23925 (20211) | 20211..20498 | + | 288 | WP_230071785.1 | hypothetical protein | - |
| QQK14_RS23935 (21875) | 21875..22689 | + | 815 | Protein_30 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| QQK14_RS23940 (22776) | 22776..23018 | + | 243 | Protein_31 | phosphoglucosamine mutase | - |
| QQK14_RS23945 (23254) | 23254..24747 | - | 1494 | WP_015344975.1 | IS91-like element ISVsa3 family transposase | - |
| QQK14_RS23950 (24859) | 24859..25164 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| QQK14_RS23955 (25192) | 25192..26405 | - | 1214 | Protein_34 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| QQK14_RS23960 (26626) | 26626..27261 | - | 636 | WP_072716705.1 | DUF3363 domain-containing protein | - |
| QQK14_RS23965 (27539) | 27539..28369 | - | 831 | Protein_36 | IS91-like element ISVsa3 family transposase | - |
| QQK14_RS23970 (28433) | 28433..29137 | + | 705 | WP_001067784.1 | IS6-like element IS1006 family transposase | - |
| QQK14_RS23975 (29222) | 29222..29698 | - | 477 | WP_223171565.1 | hypothetical protein | - |
| QQK14_RS23980 (29632) | 29632..32583 | - | 2952 | WP_015344976.1 | Tn3-like element TnAs3 family transposase | - |
| QQK14_RS23985 (32586) | 32586..33146 | - | 561 | WP_000147567.1 | recombinase family protein | - |
| QQK14_RS23990 (33272) | 33272..33622 | - | 351 | WP_071830595.1 | DUF3330 domain-containing protein | - |
| QQK14_RS23995 (33825) | 33825..34838 | - | 1014 | WP_000845039.1 | class 1 integron integrase IntI1 | - |
| QQK14_RS24000 (34983) | 34983..35480 | + | 498 | WP_001083725.1 | trimethoprim-resistant dihydrofolate reductase DfrA12 | - |
| QQK14_RS24005 (35592) | 35592..35882 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| QQK14_RS24010 (35888) | 35888..36726 | + | 839 | Protein_45 | AadA family aminoglycoside 3''-O-nucleotidyltransferase | - |
| QQK14_RS24015 (36941) | 36941..38200 | + | 1260 | WP_000095725.1 | chloramphenicol efflux MFS transporter CmlA1 | - |
| QQK14_RS24020 (38293) | 38293..39131 | + | 839 | Protein_47 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | - |
| QQK14_RS24025 (39254) | 39254..39586 | + | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| QQK14_RS24030 (39833) | 39833..40465 | - | 633 | WP_020802982.1 | IS256 family transposase | - |
| QQK14_RS24035 (40488) | 40488..40718 | + | 231 | WP_136655701.1 | hypothetical protein | - |
| QQK14_RS24040 (40726) | 40726..40893 | - | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| QQK14_RS24045 (41012) | 41012..42931 | - | 1920 | WP_025989258.1 | tetracycline resistance ribosomal protection protein Tet(M) | - |
| QQK14_RS24050 (42947) | 42947..43063 | - | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| QQK14_RS24055 (43308) | 43308..43775 | - | 468 | Protein_54 | conjugal transfer protein | - |
| QQK14_RS24060 (43829) | 43829..44533 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QQK14_RS24065 (44596) | 44596..45006 | + | 411 | Protein_56 | IS3 family transposase | - |
| QQK14_RS24070 (45093) | 45093..45288 | + | 196 | Protein_57 | serine/threonine protein kinase | - |
| QQK14_RS24075 (45409) | 45409..46149 | + | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| QQK14_RS24080 (46434) | 46434..47411 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| QQK14_RS24085 (48157) | 48157..48480 | + | 324 | Protein_60 | helix-turn-helix domain-containing protein | - |
| QQK14_RS24090 (48482) | 48482..48586 | + | 105 | Protein_61 | AAA family ATPase | - |
| QQK14_RS24095 (48647) | 48647..49160 | + | 514 | Protein_62 | DUF4113 domain-containing protein | - |
| QQK14_RS24105 (50393) | 50393..51307 | + | 915 | WP_000949004.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| QQK14_RS24110 (51307) | 51307..52134 | + | 828 | WP_000983710.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| QQK14_RS24115 (52131) | 52131..52988 | + | 858 | WP_001101723.1 | iron/manganese ABC transporter permease subunit SitC | - |
| QQK14_RS24120 (52985) | 52985..53842 | + | 858 | WP_000968139.1 | iron/manganese ABC transporter permease subunit SitD | - |
| QQK14_RS24125 (54076) | 54076..54333 | - | 258 | Protein_68 | Tn3 family transposase | - |
| QQK14_RS24130 (54331) | 54331..54744 | + | 414 | Protein_69 | phosphopyruvate hydratase | - |
| QQK14_RS24135 (55085) | 55085..55465 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| QQK14_RS24140 (55845) | 55845..57038 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| QQK14_RS24145 (57174) | 57174..58898 | + | 1725 | WP_000602863.1 | NIS family aerobactin synthetase IucA | - |
| QQK14_RS24150 (58899) | 58899..59846 | + | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase IucB | - |
| QQK14_RS24155 (59846) | 59846..61588 | + | 1743 | WP_001015721.1 | NIS family aerobactin synthetase IucC | - |
| QQK14_RS24160 (61585) | 61585..62918 | + | 1334 | Protein_75 | NADPH-dependent L-lysine N(6)-monooxygenase IucD | - |
| QQK14_RS24165 (62944) | 62944..65145 | + | 2202 | WP_000973519.1 | ferric aerobactin receptor IutA | - |
| QQK14_RS24170 (65525) | 65525..66222 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| QQK14_RS24175 (66476) | 66476..67498 | - | 1023 | WP_284344166.1 | DNA helicase UvrD | - |
| QQK14_RS24180 (67483) | 67483..69048 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| QQK14_RS24185 (69123) | 69123..69539 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QQK14_RS24190 (69536) | 69536..69766 | - | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| QQK14_RS24195 (70147) | 70147..73941 | + | 3795 | WP_001144731.1 | hypothetical protein | - |
| QQK14_RS24200 (73986) | 73986..74402 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QQK14_RS24205 (74399) | 74399..74629 | - | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| QQK14_RS24210 (74894) | 74894..75394 | + | 501 | WP_000528932.1 | HEPN family nuclease | - |
| QQK14_RS24215 (75407) | 75407..76180 | + | 774 | WP_000905949.1 | hypothetical protein | - |
| QQK14_RS24220 (76347) | 76347..77480 | + | 1134 | WP_000545984.1 | DUF3800 domain-containing protein | - |
| QQK14_RS24225 (77514) | 77514..78026 | - | 513 | WP_000151784.1 | hypothetical protein | - |
| QQK14_RS24230 (78594) | 78594..78812 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| QQK14_RS24235 (78814) | 78814..79119 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | - |
| QQK14_RS24240 (79120) | 79120..79926 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| QQK14_RS24245 (80438) | 80438..81142 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|