MGE detailed information
MGE type: Mobilizable plasmid MGE length: 63710 bp
Accession: NZ_AP027948 Location: 1..63710 Organism: Escherichia coli strain VE-F10 Replicon: plasmid pVE-F10_2
Accession: NZ_AP027948 Location: 1..63710 Organism: Escherichia coli strain VE-F10 Replicon: plasmid pVE-F10_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQK65_RS23860 (VEF10_45750) | 1..1029 | + | 1029 | WP_001175212.1 | plasmid replication initiator RepA | - |
| QQK65_RS23865 | 1730..1920 | + | 191 | Protein_1 | hypothetical protein | - |
| QQK65_RS23870 | 2035..2439 | - | 405 | WP_001175008.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| QQK65_RS23875 (VEF10_45760) | 2498..3724 | + | 1227 | WP_001672025.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| QQK65_RS23880 (VEF10_45780) | 4388..4540 | + | 153 | Protein_4 | DUF5431 family protein | - |
| QQK65_RS23885 | 4485..4607 | + | 123 | WP_223170659.1 | type I toxin-antitoxin system Hok family toxin | - |
| QQK65_RS23890 (VEF10_45790) | 4757..5353 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| QQK65_RS23895 (VEF10_45800) | 5371..5655 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| QQK65_RS23900 (VEF10_45810) | 5729..6394 | - | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| QQK65_RS23905 (VEF10_45820) | 6983..7312 | + | 330 | WP_000855119.1 | hypothetical protein | - |
| QQK65_RS23910 (VEF10_45830) | 7716..8231 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| QQK65_RS23915 (VEF10_45840) | 8335..8877 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| QQK65_RS23920 (VEF10_45850) | 8874..9128 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| QQK65_RS23925 (VEF10_45860) | 9125..9367 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| QQK65_RS23930 (VEF10_45870) | 9938..10231 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| QQK65_RS23935 (VEF10_45890) | 10725..10973 | + | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| QQK65_RS23940 (VEF10_45900) | 10970..11317 | + | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| QQK65_RS23945 (VEF10_45910) | 11405..11848 | - | 444 | WP_023223351.1 | hypothetical protein | - |
| QQK65_RS23950 (VEF10_45920) | 12089..12388 | + | 300 | WP_034169410.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| QQK65_RS23955 (VEF10_45930) | 12648..12974 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| QQK65_RS23960 (VEF10_45940) | 12976..13299 | - | 324 | WP_223666488.1 | hypothetical protein | - |
| QQK65_RS23965 | 13276..13416 | - | 141 | Protein_21 | hypothetical protein | - |
| QQK65_RS23970 (VEF10_45950) | 13436..14143 | - | 708 | WP_063084541.1 | hypothetical protein | - |
| QQK65_RS23975 (VEF10_45960) | 14145..14897 | - | 753 | WP_000797967.1 | conjugal transfer protein TraL | - |
| QQK65_RS23980 (VEF10_45970) | 14915..15316 | - | 402 | WP_063084542.1 | hypothetical protein | - |
| QQK65_RS23985 (VEF10_45980) | 15684..16025 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| QQK65_RS23990 (VEF10_45990) | 16022..20335 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| QQK65_RS23995 (VEF10_46000) | 20433..22058 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| QQK65_RS24000 (VEF10_46010) | 22130..22903 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| QQK65_RS24005 (VEF10_46020) | 22862..23302 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| QQK65_RS24010 (VEF10_46030) | 23648..23854 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| QQK65_RS24015 (VEF10_46040) | 23923..26088 | - | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| QQK65_RS24020 (VEF10_46050) | 26093..26668 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| QQK65_RS24025 (VEF10_46060) | 26838..28514 | - | 1677 | WP_284344122.1 | PcfJ domain-containing protein | - |
| QQK65_RS24030 (VEF10_46070) | 28609..29141 | - | 533 | Protein_34 | thermonuclease family protein | - |
| QQK65_RS24035 (VEF10_46080) | 29171..29824 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| QQK65_RS24040 (VEF10_46090) | 29836..30960 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| QQK65_RS24045 | 32140..32400 | + | 261 | WP_029237379.1 | hypothetical protein | - |
| QQK65_RS24050 (VEF10_46120) | 32379..33695 | - | 1317 | WP_021500066.1 | hypothetical protein | VF |
| QQK65_RS24055 (VEF10_46130) | 33708..34343 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| QQK65_RS24060 (VEF10_46140) | 34347..34829 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| QQK65_RS24065 (VEF10_46150) | 34895..35452 | - | 558 | WP_000095048.1 | type 4 pilus major pilin | - |
| QQK65_RS24070 (VEF10_46160) | 35497..36606 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QQK65_RS24075 (VEF10_46170) | 36597..38135 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| QQK65_RS24080 (VEF10_46180) | 38160..38654 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| QQK65_RS24085 (VEF10_46190) | 38638..39948 | - | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| QQK65_RS24090 (VEF10_46200) | 39999..41642 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| QQK65_RS24095 (VEF10_46210) | 41635..42171 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| QQK65_RS24100 (VEF10_46220) | 42218..44176 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QQK65_RS24105 (VEF10_46230) | 44192..45247 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| QQK65_RS24110 (VEF10_46240) | 45266..46405 | - | 1140 | WP_000790640.1 | Type IV secretion system protein virB10 | VF |
| QQK65_RS24115 (VEF10_46250) | 46395..47165 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| QQK65_RS24120 (VEF10_46260) | 47162..47896 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| QQK65_RS24125 (VEF10_46280) | 48062..50419 | - | 2358 | WP_063078682.1 | VirB4 family type IV secretion system protein | - |
| QQK65_RS24130 (VEF10_46290) | 50425..50745 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| QQK65_RS24135 (VEF10_46300) | 50816..51106 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| QQK65_RS24140 (VEF10_46310) | 51106..51690 | - | 585 | WP_001177113.1 | Type IV secretion system protein virB1 | VF |
| QQK65_RS24145 (VEF10_46320) | 51711..52109 | - | 399 | WP_001153665.1 | hypothetical protein | - |
| QQK65_RS24150 (VEF10_46330) | 52228..52665 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| QQK65_RS24155 (VEF10_46340) | 52671..53906 | - | 1236 | WP_072652802.1 | hypothetical protein | VF |
| QQK65_RS24160 (VEF10_46350) | 53909..54208 | - | 300 | WP_000835764.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| QQK65_RS24165 (VEF10_46360) | 54276..54557 | - | 282 | WP_000638823.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QQK65_RS24170 (VEF10_46370) | 54547..54798 | - | 252 | WP_000121741.1 | hypothetical protein | Antitoxin Detail |
| QQK65_RS24175 | 54898..55533 | - | 636 | WP_015059536.1 | hypothetical protein | - |
| QQK65_RS24180 (VEF10_46380) | 55581..56390 | + | 810 | WP_171004827.1 | DUF5710 domain-containing protein | - |
| QQK65_RS24185 (VEF10_46390) | 56613..56837 | - | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| QQK65_RS24190 (VEF10_46400) | 56846..57490 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| QQK65_RS24195 (VEF10_46410) | 57496..58491 | - | 996 | WP_065304446.1 | hypothetical protein | VF |
| QQK65_RS24200 (VEF10_46420) | 58495..58752 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| QQK65_RS24205 (VEF10_46430) | 58749..59051 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| QQK65_RS24210 | 59032..59289 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| QQK65_RS24215 (VEF10_46440) | 59322..59768 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| QQK65_RS24220 (VEF10_46450) | 59779..59949 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| QQK65_RS24225 (VEF10_46460) | 59953..60396 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| QQK65_RS24230 (VEF10_46470) | 60770..61723 | - | 954 | WP_086669491.1 | SPFH domain-containing protein | - |
| QQK65_RS24235 (VEF10_46480) | 61750..61926 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| QQK65_RS24240 (VEF10_46490) | 61919..62134 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| QQK65_RS24245 (VEF10_46500) | 62127..62579 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|