MGE detailed information
MGE type: Prophage MGE length: 55352 bp
Accession: NZ_AP024628 Location: 2619529..2674880 Organism: Bacillus subtilis strain BEST3145 Replicon: chromosome
Accession: NZ_AP024628 Location: 2619529..2674880 Organism: Bacillus subtilis strain BEST3145 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6K00_RS13605 (2614617) | 2614617..2614973 | - | 357 | WP_003229971.1 | ribosome silencing factor | - |
| K6K00_RS13610 (2614991) | 2614991..2615551 | - | 561 | WP_004399059.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| K6K00_RS13615 (2615541) | 2615541..2616110 | - | 570 | WP_004398676.1 | nicotinate-nucleotide adenylyltransferase | - |
| K6K00_RS13620 (2616122) | 2616122..2616412 | - | 291 | WP_003226133.1 | ribosome assembly RNA-binding protein YhbY | - |
| K6K00_RS13625 (2616406) | 2616406..2617248 | - | 843 | WP_003229967.1 | shikimate dehydrogenase | - |
| K6K00_RS13630 (2617266) | 2617266..2618366 | - | 1101 | WP_003229966.1 | ribosome biogenesis GTPase YqeH | - |
| K6K00_RS13635 (2618370) | 2618370..2618888 | - | 519 | WP_003226126.1 | YqeG family HAD IIIA-type phosphatase | - |
| K6K00_RS13640 (2619250) | 2619250..2619390 | + | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| K6K00_RS13645 (2619696) | 2619696..2620427 | - | 732 | WP_003229964.1 | GDSL-type esterase/lipase family protein | - |
| K6K00_RS13650 (2620679) | 2620679..2621431 | - | 753 | WP_003229963.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| K6K00_RS13655 (2621618) | 2621618..2622244 | + | 627 | WP_003229962.1 | TVP38/TMEM64 family protein | - |
| K6K00_RS13660 (2622263) | 2622263..2623156 | - | 894 | WP_003229961.1 | 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating | VF |
| K6K00_RS13665 (2623408) | 2623408..2624130 | + | 723 | WP_010886572.1 | hypothetical protein | - |
| K6K00_RS13670 (2624163) | 2624163..2624573 | - | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | - |
| K6K00_RS13675 (2624769) | 2624769..2625116 | + | 348 | Protein_2669 | sigma-70 family RNA polymerase sigma factor | - |
| K6K00_RS13680 (2625147) | 2625147..2626607 | - | 1461 | WP_223257626.1 | Transposon gamma-delta resolvase ; Integrase | Integrase |
| K6K00_RS22030 (2626565) | 2626565..2626743 | - | 179 | Protein_2671 | hypothetical protein | - |
| K6K00_RS13685 (2627098) | 2627098..2627517 | - | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| K6K00_RS13690 (2627529) | 2627529..2628569 | - | 1041 | WP_004398718.1 | arsenite efflux transporter Acr3 | - |
| K6K00_RS13695 (2628592) | 2628592..2629032 | - | 441 | WP_003229954.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| K6K00_RS13700 (2629093) | 2629093..2629410 | - | 318 | WP_004399122.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| K6K00_RS13705 (2629782) | 2629782..2630546 | - | 765 | WP_004398670.1 | YqcI/YcgG family protein | - |
| K6K00_RS13710 (2630989) | 2630989..2632116 | + | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| K6K00_RS13715 (2632106) | 2632106..2632240 | + | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| K6K00_RS13720 (2632350) | 2632350..2632508 | + | 159 | WP_003245945.1 | hypothetical protein | - |
| K6K00_RS13725 (2632878) | 2632878..2634473 | + | 1596 | WP_004399034.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| K6K00_RS13730 (2634488) | 2634488..2635066 | + | 579 | WP_009967790.1 | type VII secretion system immunity protein YqcF | - |
| K6K00_RS13735 (2635184) | 2635184..2635330 | + | 147 | WP_009967791.1 | hypothetical protein | - |
| K6K00_RS13740 (2635327) | 2635327..2635689 | - | 363 | WP_003229947.1 | hypothetical protein | - |
| K6K00_RS13745 (2635705) | 2635705..2636184 | - | 480 | WP_004399085.1 | hypothetical protein | - |
| K6K00_RS13750 (2636349) | 2636349..2637167 | - | 819 | WP_003229946.1 | N-acetylmuramoyl-L-alanine amidase CwlA | VF |
| K6K00_RS13755 (2637212) | 2637212..2637634 | - | 423 | WP_003246208.1 | holin family protein | - |
| K6K00_RS13760 (2637679) | 2637679..2638572 | - | 894 | WP_003246010.1 | hypothetical protein | - |
| K6K00_RS13765 (2638660) | 2638660..2638824 | - | 165 | WP_003229944.1 | XkdX family protein | - |
| K6K00_RS13770 (2638821) | 2638821..2639156 | - | 336 | WP_009967793.1 | XkdW family protein | - |
| K6K00_RS13775 (2639166) | 2639166..2640266 | - | 1101 | WP_003229943.1 | pyocin knob domain-containing protein | - |
| K6K00_RS13780 (2640269) | 2640269..2640541 | - | 273 | WP_003229942.1 | hypothetical protein | - |
| K6K00_RS13785 (2640538) | 2640538..2641116 | - | 579 | WP_003229941.1 | YmfQ family protein | - |
| K6K00_RS13790 (2641100) | 2641100..2642146 | - | 1047 | WP_003229940.1 | baseplate J/gp47 family protein | - |
| K6K00_RS13795 (2642139) | 2642139..2642564 | - | 426 | WP_004398572.1 | DUF2634 domain-containing protein | - |
| K6K00_RS13800 (2642577) | 2642577..2642840 | - | 264 | WP_003229938.1 | DUF2577 family protein | - |
| K6K00_RS13805 (2642837) | 2642837..2643817 | - | 981 | WP_004398524.1 | hypothetical protein | - |
| K6K00_RS13810 (2643830) | 2643830..2644489 | - | 660 | WP_004398548.1 | LysM peptidoglycan-binding domain-containing protein | - |
| K6K00_RS13815 (2644482) | 2644482..2649239 | - | 4758 | WP_003246092.1 | transglycosylase SLT domain-containing protein | - |
| K6K00_RS13820 (2649242) | 2649242..2649379 | - | 138 | WP_003229934.1 | hypothetical protein | - |
| K6K00_RS13825 (2649421) | 2649421..2649870 | - | 450 | WP_003229933.1 | phage portal protein | - |
| K6K00_RS13830 (2650016) | 2650016..2650195 | + | 180 | WP_004398662.1 | type I toxin-antitoxin system toxin TxpA | Toxin Detail |
| - (2650119) | 2650119..2650341 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - (2650119) | 2650119..2650341 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - (2650119) | 2650119..2650341 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - (2650119) | 2650119..2650341 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| K6K00_RS13835 (2650575) | 2650575..2650664 | + | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| K6K00_RS13840 (2650918) | 2650918..2651361 | - | 444 | WP_003229930.1 | phage tail tube protein | - |
| K6K00_RS13845 (2651364) | 2651364..2652764 | - | 1401 | WP_003229929.1 | phage tail sheath family protein | - |
| K6K00_RS13850 (2652765) | 2652765..2652956 | - | 192 | WP_010886574.1 | hypothetical protein | - |
| K6K00_RS13855 (2652953) | 2652953..2653390 | - | 438 | WP_003229927.1 | hypothetical protein | - |
| K6K00_RS13860 (2653403) | 2653403..2653906 | - | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| K6K00_RS13865 (2653903) | 2653903..2654265 | - | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| K6K00_RS13870 (2654262) | 2654262..2654657 | - | 396 | WP_004398566.1 | DUF3199 family protein | - |
| K6K00_RS13875 (2654661) | 2654661..2654972 | - | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| K6K00_RS13880 (2654983) | 2654983..2655918 | - | 936 | WP_003229922.1 | phage major capsid protein | - |
| K6K00_RS13885 (2655937) | 2655937..2656905 | - | 969 | WP_003229921.1 | XkdF-like putative serine protease domain-containing protein | - |
| K6K00_RS13890 (2656938) | 2656938..2657591 | - | 654 | WP_003229920.1 | hypothetical protein | - |
| K6K00_RS13895 (2657632) | 2657632..2658549 | - | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| K6K00_RS13900 (2658546) | 2658546..2660078 | - | 1533 | WP_004398894.1 | phage portal protein | - |
| K6K00_RS13905 (2660082) | 2660082..2661377 | - | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| K6K00_RS13910 (2661370) | 2661370..2662089 | - | 720 | WP_003229916.1 | phage terminase small subunit | - |
| K6K00_RS13915 (2662157) | 2662157..2662621 | - | 465 | WP_004398685.1 | hypothetical protein | - |
| K6K00_RS13920 (2662765) | 2662765..2663220 | - | 456 | WP_004398775.1 | hypothetical protein | - |
| K6K00_RS13925 (2663418) | 2663418..2664347 | + | 930 | WP_003229913.1 | hypothetical protein | - |
| K6K00_RS13930 (2664421) | 2664421..2664627 | - | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| K6K00_RS13935 (2664709) | 2664709..2665137 | - | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| K6K00_RS13940 (2665233) | 2665233..2665382 | - | 150 | WP_003229910.1 | hypothetical protein | - |
| K6K00_RS13945 (2665373) | 2665373..2666314 | - | 942 | WP_075058863.1 | ATP-binding protein | - |
| K6K00_RS13950 (2666196) | 2666196..2666873 | - | 678 | WP_010886575.1 | DnaD domain protein | - |
| K6K00_RS13955 (2666949) | 2666949..2667803 | - | 855 | WP_003229907.1 | recombinase RecT | - |
| K6K00_RS13960 (2667806) | 2667806..2668765 | - | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| K6K00_RS13965 (2668871) | 2668871..2669065 | - | 195 | WP_003229905.1 | hypothetical protein | - |
| K6K00_RS13970 (2669025) | 2669025..2669198 | - | 174 | WP_119123069.1 | hypothetical protein | - |
| K6K00_RS13975 (2669195) | 2669195..2669452 | - | 258 | WP_003245994.1 | YqaH family protein | - |
| K6K00_RS13980 (2669449) | 2669449..2670018 | - | 570 | WP_004398626.1 | helix-turn-helix transcriptional regulator | - |
| K6K00_RS13985 (2670092) | 2670092..2670232 | - | 141 | WP_003229902.1 | hypothetical protein | - |
| K6K00_RS13990 (2670262) | 2670262..2670492 | - | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| K6K00_RS13995 (2670669) | 2670669..2671019 | + | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
| K6K00_RS14000 (2671286) | 2671286..2671453 | - | 168 | WP_003229900.1 | hypothetical protein | - |
| K6K00_RS14005 (2671809) | 2671809..2672345 | - | 537 | WP_004399117.1 | AAA family ATPase | - |
| K6K00_RS14010 (2672614) | 2672614..2673132 | + | 519 | WP_004399097.1 | ImmA/IrrE family metallo-endopeptidase | - |
| K6K00_RS14015 (2673138) | 2673138..2673530 | + | 393 | Protein_2738 | sigma-70 family RNA polymerase sigma factor | - |
| K6K00_RS14020 (2673530) | 2673530..2673646 | + | 117 | WP_003229898.1 | hypothetical protein | - |
| K6K00_RS14025 (2673612) | 2673612..2673812 | - | 201 | Protein_2740 | recombinase family protein | - |
| K6K00_RS14030 (2673755) | 2673755..2673919 | - | 165 | WP_010886576.1 | hypothetical protein | - |
| K6K00_RS14035 (2674464) | 2674464..2674880 | - | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
| K6K00_RS14040 (2674926) | 2674926..2676224 | - | 1299 | WP_003246194.1 | two-component system sensor histidine kinase YrkQ | - |
| K6K00_RS14045 (2676211) | 2676211..2676906 | - | 696 | WP_003229895.1 | two-component response regulator YrkP | - |
| K6K00_RS14050 (2677174) | 2677174..2678391 | + | 1218 | WP_003229894.1 | DUF418 domain-containing protein | - |
| K6K00_RS14055 (2678310) | 2678310..2678558 | + | 249 | WP_119123070.1 | hypothetical protein | - |
| K6K00_RS14060 (2678903) | 2678903..2679460 | + | 558 | WP_003229892.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | Prophage | TA6322, TA10201, TA20260 | NC_000964 | 2645490..2699243 | 0.003 |