MGE detailed information
MGE type: Conjugative plasmid MGE length: 163252 bp
Accession: NZ_AP024593 Location: 1..163252 Organism: Klebsiella variicola strain JCM 12419 Replicon: plasmid pKLVA-1
Accession: NZ_AP024593 Location: 1..163252 Organism: Klebsiella variicola strain JCM 12419 Replicon: plasmid pKLVA-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
KI238_RS26845 (KLVA_51990) | 1..1011 | + | 1011 | WP_042936824.1 | RepB family plasmid replication initiator protein | - |
KI238_RS26850 (KLVA_52000) | 1835..2575 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
KI238_RS27920 | 2905..3235 | - | 331 | Protein_2 | type II toxin-antitoxin system RelE/ParE family toxin | - |
KI238_RS26855 (KLVA_52010) | 3222..3494 | - | 273 | WP_153669782.1 | type II toxin-antitoxin system ParD family antitoxin | - |
KI238_RS27925 (KLVA_52020) | 3719..4237 | - | 519 | WP_227518052.1 | hypothetical protein | - |
KI238_RS27930 (KLVA_52030) | 4426..5391 | - | 966 | WP_227518053.1 | hypothetical protein | - |
KI238_RS26865 (KLVA_52040) | 5956..6765 | - | 810 | WP_000654269.1 | hypothetical protein | - |
KI238_RS26870 (KLVA_52050) | 6783..7145 | - | 363 | WP_000533745.1 | hypothetical protein | - |
KI238_RS26875 (KLVA_52060) | 8067..8831 | + | 765 | WP_123797894.1 | hypothetical protein | - |
KI238_RS26880 (KLVA_52070) | 8834..9115 | + | 282 | WP_123797895.1 | hypothetical protein | - |
KI238_RS26885 (KLVA_52080) | 9198..10472 | + | 1275 | WP_049117673.1 | HlyD family secretion protein | - |
KI238_RS26890 (KLVA_52090) | 10456..12582 | + | 2127 | WP_264754911.1 | peptidase domain-containing ABC transporter | - |
KI238_RS26895 (KLVA_52100) | 12868..13950 | + | 1083 | WP_119867266.1 | transcriptional regulator | - |
KI238_RS26900 (KLVA_52110) | 14099..14842 | + | 744 | WP_119867221.1 | hypothetical protein | - |
KI238_RS26905 (KLVA_52120) | 14982..15590 | - | 609 | WP_119867222.1 | toll/interleukin-1 receptor domain-containing protein | - |
KI238_RS26910 (KLVA_52130) | 15819..16388 | - | 570 | WP_119867223.1 | hypothetical protein | - |
KI238_RS26915 (KLVA_52140) | 16391..17533 | - | 1143 | WP_119867224.1 | toll/interleukin-1 receptor domain-containing protein | - |
KI238_RS26920 (KLVA_52150) | 17667..19283 | - | 1617 | WP_119867225.1 | CBASS cGAMP-activated phospholipase | - |
KI238_RS26925 (KLVA_52160) | 19445..19930 | - | 486 | WP_119867226.1 | TIR domain-containing protein | - |
KI238_RS26930 (KLVA_52170) | 19942..20469 | - | 528 | WP_119867227.1 | toll/interleukin-1 receptor domain-containing protein | - |
KI238_RS26935 (KLVA_52180) | 21023..21253 | + | 231 | WP_119867228.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
KI238_RS26940 (KLVA_52190) | 21250..21666 | + | 417 | WP_119867229.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
KI238_RS26945 (KLVA_52210) | 22170..23180 | - | 1011 | WP_123797896.1 | hypothetical protein | - |
KI238_RS26950 (KLVA_52220) | 23700..23930 | + | 231 | WP_119867231.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
KI238_RS26955 (KLVA_52230) | 23927..24343 | + | 417 | WP_119867232.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
KI238_RS26960 (KLVA_52240) | 24485..24703 | + | 219 | WP_119867233.1 | hypothetical protein | - |
KI238_RS26965 (KLVA_52250) | 24782..25108 | + | 327 | WP_123797897.1 | hypothetical protein | - |
KI238_RS26970 (KLVA_52260) | 25348..25605 | + | 258 | WP_119867235.1 | hypothetical protein | - |
KI238_RS26975 (KLVA_52270) | 25605..26171 | + | 567 | WP_119867236.1 | hypothetical protein | - |
KI238_RS26980 (KLVA_52280) | 26202..26693 | + | 492 | WP_119867237.1 | DNA-binding protein | - |
KI238_RS26985 (KLVA_52290) | 26717..27229 | - | 513 | WP_123797898.1 | hypothetical protein | - |
KI238_RS26990 (KLVA_52300) | 27852..28637 | + | 786 | WP_123797899.1 | hypothetical protein | - |
KI238_RS26995 (KLVA_52310) | 28800..28997 | - | 198 | WP_123797900.1 | hypothetical protein | - |
KI238_RS27000 (KLVA_52320) | 29204..29470 | + | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
KI238_RS27005 | 29458..29940 | + | 483 | WP_023288256.1 | GNAT family N-acetyltransferase | Toxin Detail |
KI238_RS27010 (KLVA_52330) | 30253..30771 | + | 519 | Protein_35 | HTH-type transcriptional regulator NimR | VF |
KI238_RS27015 (KLVA_52340) | 30914..31213 | - | 300 | WP_101880805.1 | putative quinol monooxygenase | - |
KI238_RS27020 (KLVA_52350) | 32243..33655 | - | 1413 | WP_119867240.1 | amino acid permease | - |
KI238_RS27025 (KLVA_52360) | 34207..35109 | - | 903 | WP_119867241.1 | LysR substrate-binding domain-containing protein | - |
KI238_RS27030 (KLVA_52370) | 35513..36664 | + | 1152 | WP_101880807.1 | PLP-dependent aspartate aminotransferase family protein | - |
KI238_RS27035 | 36673..37602 | + | 930 | WP_164078953.1 | EamA family transporter | - |
KI238_RS27040 | 37950..39068 | + | 1119 | Protein_41 | IS110 family transposase ISEc20 | Transposase |
KI238_RS27050 (KLVA_52420) | 40224..40919 | - | 696 | WP_101880810.1 | IS6 family transposase ISEas1 | Transposase |
KI238_RS27055 (KLVA_52430) | 40982..41386 | - | 405 | WP_100781753.1 | Exc2 family lipoprotein | - |
KI238_RS27060 (KLVA_52440) | 41595..42143 | - | 549 | WP_072124330.1 | thioredoxin fold domain-containing protein | - |
KI238_RS27065 (KLVA_52460) | 42745..43920 | - | 1176 | WP_119867244.1 | MFS transporter | - |
KI238_RS27070 (KLVA_52470) | 43925..44335 | - | 411 | WP_072124332.1 | heme-binding protein | - |
KI238_RS27075 (KLVA_52480) | 44418..45134 | - | 717 | WP_226330565.1 | IclR family transcriptional regulator | - |
KI238_RS27080 (KLVA_52490) | 45573..45821 | + | 249 | WP_072124333.1 | hypothetical protein | - |
KI238_RS27085 (KLVA_52500) | 45818..46390 | + | 573 | WP_101880773.1 | hypothetical protein | - |
KI238_RS27090 (KLVA_52510) | 46659..47009 | - | 351 | WP_167878626.1 | hypothetical protein | - |
KI238_RS27095 (KLVA_52520) | 47144..47338 | - | 195 | WP_164078955.1 | hypothetical protein | - |
KI238_RS27100 | 47528..48001 | - | 474 | Protein_53 | IS3 family transposase | - |
KI238_RS27105 | 48008..49507 | - | 1500 | WP_164078958.1 | MFS transporter | - |
KI238_RS27935 | 49708..50264 | - | 557 | Protein_55 | IS3 family transposase | - |
KI238_RS27110 | 51010..52188 | - | 1179 | WP_101880775.1 | putative signaling protein | VF |
KI238_RS27115 (KLVA_52570) | 53262..54377 | + | 1116 | WP_101880776.1 | alpha/beta fold hydrolase | - |
KI238_RS27120 (KLVA_52580) | 54424..54810 | + | 387 | WP_100730232.1 | hypothetical protein | - |
KI238_RS27125 (KLVA_52590) | 55356..56045 | + | 690 | WP_101880777.1 | YafY family protein | - |
KI238_RS27130 (KLVA_52600) | 56116..56862 | + | 747 | WP_101880778.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
KI238_RS27135 (KLVA_52620) | 57558..59321 | - | 1764 | WP_101880780.1 | putative signaling protein | VF |
KI238_RS27140 | 59983..60573 | + | 591 | WP_052251507.1 | hypothetical protein | - |
KI238_RS27145 (KLVA_52630) | 60614..61753 | + | 1140 | WP_119867245.1 | MFS transporter | - |
KI238_RS27150 (KLVA_52640) | 61726..62955 | + | 1230 | WP_040107892.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
KI238_RS27155 (KLVA_52650) | 63045..64205 | + | 1161 | WP_233436456.1 | aromatic amino acid transport family protein | - |
KI238_RS27160 (KLVA_52660) | 64250..66046 | + | 1797 | WP_063267099.1 | alpha-glucosidase | - |
KI238_RS27165 (KLVA_52670) | 66842..67987 | + | 1146 | WP_119867246.1 | ABC transporter permease | - |
KI238_RS27170 (KLVA_52680) | 67981..68781 | + | 801 | WP_119867247.1 | putative ribonucleotide transport ATP-binding protein mkl | VF |
KI238_RS27175 (KLVA_52690) | 68786..69724 | + | 939 | WP_040107887.1 | MlaD family protein | - |
KI238_RS27180 (KLVA_52700) | 69724..70368 | + | 645 | WP_119867248.1 | ABC-type transport auxiliary lipoprotein family protein | - |
KI238_RS28000 | 71222..71326 | + | 105 | Protein_71 | hypothetical protein | - |
KI238_RS27940 | 71332..71492 | - | 161 | Protein_72 | SOS response-associated peptidase | - |
KI238_RS27185 (KLVA_52710) | 71643..72272 | + | 630 | WP_119867249.1 | DNA-binding protein | - |
KI238_RS27190 (KLVA_52720) | 72297..73004 | - | 708 | WP_119867250.1 | RES domain-containing protein | - |
KI238_RS27195 | 73519..73674 | + | 156 | Protein_75 | IS110 family transposase IS1663 | Transposase |
KI238_RS27200 (KLVA_52730) | 73856..74275 | + | 420 | WP_012540023.1 | ASCH domain-containing protein | - |
KI238_RS27205 (KLVA_52740) | 74711..77020 | + | 2310 | WP_119867251.1 | TerB N-terminal domain-containing protein | - |
KI238_RS27210 (KLVA_52750) | 77024..78340 | + | 1317 | WP_004152291.1 | ATP-binding protein | - |
KI238_RS27215 (KLVA_52760) | 78337..80532 | + | 2196 | WP_000093087.1 | DEAD/DEAH box helicase | - |
KI238_RS27220 (KLVA_52780) | 82110..82475 | - | 366 | WP_040107964.1 | DUF596 domain-containing protein | - |
KI238_RS27225 (KLVA_52790) | 82486..84711 | - | 2226 | Protein_81 | DUF637 domain-containing protein | - |
KI238_RS27230 (KLVA_52800) | 84734..84925 | - | 192 | Protein_82 | IS110 family transposase IS1618 | Transposase |
KI238_RS27235 (KLVA_52810) | 85294..85599 | - | 306 | WP_049011000.1 | DUF596 domain-containing protein | - |
KI238_RS27240 (KLVA_52820) | 85679..91021 | - | 5343 | WP_119867252.1 | 16S rRNA endonuclease CdiA | VF |
KI238_RS27245 (KLVA_52830) | 91074..92750 | - | 1677 | WP_065810617.1 | Hemolysin transporter protein ShlB | VF |
KI238_RS27250 (KLVA_52840) | 93763..94620 | - | 858 | WP_071080863.1 | incFII family plasmid replication initiator RepA | - |
KI238_RS28005 | 94633..94846 | - | 214 | Protein_87 | protein CopA/IncA | - |
KI238_RS27260 (KLVA_52850) | 94907..95185 | - | 279 | WP_042922329.1 | replication regulatory protein RepA | - |
KI238_RS27265 (KLVA_52860) | 95506..96057 | - | 552 | WP_109883092.1 | Phospholipase D | VF |
KI238_RS27945 | 96162..96242 | - | 81 | Protein_90 | hypothetical protein | - |
KI238_RS27270 (KLVA_52870) | 96344..96605 | - | 262 | Protein_91 | bacteriocin immunity protein | - |
KI238_RS27275 (KLVA_52890) | 96607..97781 | - | 1175 | Protein_92 | hypothetical protein | - |
KI238_RS27280 (KLVA_52900) | 98138..98683 | + | 546 | WP_071080859.1 | hypothetical protein | - |
KI238_RS27285 (KLVA_52910) | 98898..99245 | - | 348 | WP_023317518.1 | DUF6404 family protein | - |
KI238_RS27290 (KLVA_52920) | 99265..99861 | - | 597 | WP_004178053.1 | fertility inhibition protein FinO | - |
KI238_RS27295 (KLVA_52930) | 100018..100743 | - | 726 | WP_119867255.1 | type-F conjugative transfer system pilin acetylase TraX | - |
KI238_RS27300 (KLVA_52940) | 100833..106091 | - | 5259 | WP_119867256.1 | Multifunctional conjugation protein TraI | Relaxase |
KI238_RS27305 (KLVA_52950) | 106091..108418 | - | 2328 | WP_119867257.1 | type IV conjugative transfer system coupling protein TraD | - |
KI238_RS27310 (KLVA_52960) | 108780..109511 | - | 732 | WP_004152629.1 | conjugal transfer complement resistance protein TraT | - |
KI238_RS27315 (KLVA_52980) | 109924..110457 | - | 534 | WP_114501468.1 | hypothetical protein | - |
KI238_RS27320 (KLVA_52990) | 110468..113311 | - | 2844 | WP_119867258.1 | conjugal transfer mating-pair stabilization protein TraG | - |
KI238_RS27325 (KLVA_53000) | 113311..114690 | - | 1380 | WP_072198238.1 | conjugal transfer pilus assembly protein TraH | - |
KI238_RS27330 (KLVA_53010) | 114668..115111 | - | 444 | WP_023158001.1 | F-type conjugal transfer protein TrbF | - |
KI238_RS27335 (KLVA_53020) | 115157..115714 | - | 558 | WP_032441889.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
KI238_RS27340 (KLVA_53030) | 115686..115925 | - | 240 | WP_023316407.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
KI238_RS27345 (KLVA_53040) | 115936..116688 | - | 753 | WP_042934721.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
KI238_RS27350 (KLVA_53050) | 116709..117035 | - | 327 | WP_064144773.1 | hypothetical protein | - |
KI238_RS27355 (KLVA_53060) | 117046..117273 | - | 228 | WP_065808180.1 | conjugal transfer protein TrbE | - |
KI238_RS27360 (KLVA_53070) | 117263..117544 | - | 282 | WP_064144771.1 | hypothetical protein | - |
KI238_RS27365 (KLVA_53080) | 117577..119532 | - | 1956 | WP_119867267.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
KI238_RS27370 (KLVA_53090) | 119529..119912 | - | 384 | WP_065808179.1 | hypothetical protein | - |
KI238_RS27375 (KLVA_53100) | 119909..120547 | - | 639 | WP_065901066.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
KI238_RS27380 (KLVA_53110) | 120560..121519 | - | 960 | WP_168712236.1 | conjugal transfer pilus assembly protein TraU | - |
KI238_RS27385 (KLVA_53120) | 121563..122189 | - | 627 | WP_065808176.1 | type-F conjugative transfer system protein TraW | - |
KI238_RS27390 (KLVA_53130) | 122189..122578 | - | 390 | WP_020326931.1 | type-F conjugative transfer system protein TrbI | - |
KI238_RS27395 (KLVA_53140) | 122578..125217 | - | 2640 | WP_119867259.1 | type IV secretion system protein TraC | - |
KI238_RS27400 | 125288..125686 | - | 399 | WP_164078962.1 | hypothetical protein | - |
KI238_RS27405 (KLVA_53150) | 125694..125984 | - | 291 | WP_119867261.1 | hypothetical protein | - |
KI238_RS27410 (KLVA_53160) | 125981..126385 | - | 405 | WP_119867262.1 | hypothetical protein | - |
KI238_RS27415 (KLVA_53170) | 126452..126769 | - | 318 | WP_023307544.1 | hypothetical protein | - |
KI238_RS27420 (KLVA_53180) | 126770..126988 | - | 219 | WP_004171484.1 | hypothetical protein | - |
KI238_RS27425 (KLVA_53190) | 127012..127302 | - | 291 | WP_032429299.1 | hypothetical protein | - |
KI238_RS27430 | 127307..127717 | - | 411 | WP_023292154.1 | hypothetical protein | - |
KI238_RS27435 | 127849..128418 | - | 570 | WP_032429300.1 | type IV conjugative transfer system lipoprotein TraV | - |
KI238_RS27440 (KLVA_53210) | 128437..128622 | - | 186 | WP_038990989.1 | hypothetical protein | - |
KI238_RS27445 (KLVA_53220) | 128619..130043 | - | 1425 | WP_071080849.1 | F-type conjugal transfer pilus assembly protein TraB | - |
KI238_RS27450 (KLVA_53230) | 130043..130783 | - | 741 | WP_004152497.1 | type-F conjugative transfer system secretin TraK | - |
KI238_RS27455 (KLVA_53240) | 130770..131336 | - | 567 | WP_020316627.1 | type IV conjugative transfer system protein TraE | - |
KI238_RS27460 (KLVA_53250) | 131356..131661 | - | 306 | WP_004178059.1 | type IV conjugative transfer system protein TraL | - |
KI238_RS27465 (KLVA_53260) | 131675..132043 | - | 369 | WP_049155512.1 | type IV conjugative transfer system pilin TraA | - |
KI238_RS27470 | 132112..132312 | - | 201 | WP_071080869.1 | TraY domain-containing protein | - |
KI238_RS27475 (KLVA_53270) | 132396..133100 | - | 705 | WP_071080847.1 | hypothetical protein | - |
KI238_RS27480 (KLVA_53280) | 133338..133730 | - | 393 | WP_020805752.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
KI238_RS27485 (KLVA_53290) | 134234..134641 | + | 408 | WP_223170089.1 | hypothetical protein | VF |
KI238_RS27490 (KLVA_53300) | 134679..135209 | - | 531 | WP_023292160.1 | antirestriction protein | - |
KI238_RS27495 (KLVA_53310) | 135834..136667 | - | 834 | WP_071080845.1 | N-6 DNA methylase | - |
KI238_RS27500 (KLVA_53320) | 136714..136944 | - | 231 | WP_119867212.1 | hypothetical protein | - |
KI238_RS27505 (KLVA_53330) | 137032..137379 | - | 348 | WP_038990975.1 | hypothetical protein | - |
KI238_RS27510 (KLVA_53340) | 137446..137826 | - | 381 | WP_119867213.1 | hypothetical protein | - |
KI238_RS27515 (KLVA_53350) | 138731..138847 | - | 117 | WP_223176086.1 | type I toxin-antitoxin system Hok family toxin | - |
KI238_RS27950 | 138795..138947 | - | 153 | WP_224230667.1 | DUF5431 family protein | - |
KI238_RS27520 (KLVA_53360) | 139100..139525 | - | 426 | WP_109883074.1 | glutaredoxin-dependent arsenate reductase | - |
KI238_RS27525 (KLVA_53370) | 139538..140827 | - | 1290 | WP_119867214.1 | arsenic transporter | - |
KI238_RS27530 (KLVA_53380) | 140872..141192 | - | 321 | WP_109883073.1 | transcriptional regulator | - |
KI238_RS27535 (KLVA_53390) | 141278..141976 | + | 699 | WP_015572073.1 | arsenical resistance protein ArsH | - |
KI238_RS27540 (KLVA_53400) | 142134..142649 | + | 516 | WP_032664851.1 | hypothetical protein | - |
KI238_RS27545 | 143222..144590 | - | 1369 | Protein_147 | IS3 family transposase ISKpn8 | Transposase |
KI238_RS27550 (KLVA_53430) | 144778..145104 | - | 327 | WP_038992719.1 | hypothetical protein | - |
KI238_RS27555 (KLVA_53440) | 145101..145829 | - | 729 | WP_109883063.1 | plasmid SOS inhibition protein A | - |
KI238_RS27560 (KLVA_53450) | 145826..146257 | - | 432 | WP_038992715.1 | conjugation system SOS inhibitor PsiB | - |
KI238_RS27565 (KLVA_53460) | 146302..148302 | - | 2001 | WP_119867215.1 | ParB/RepB/Spo0J family partition protein | - |
KI238_RS27570 (KLVA_53470) | 148371..148619 | - | 249 | WP_119867216.1 | DUF905 domain-containing protein | - |
KI238_RS27575 (KLVA_53480) | 148668..149210 | - | 543 | WP_040107913.1 | single-stranded DNA-binding protein | - |
KI238_RS27955 | 149241..149444 | - | 204 | WP_227518051.1 | single-stranded DNA-binding protein | - |
KI238_RS27580 (KLVA_53490) | 149879..150199 | - | 321 | WP_042938876.1 | hypothetical protein | - |
KI238_RS27585 | 150234..150488 | - | 255 | Protein_156 | DNA polymerase III subunit theta | - |
KI238_RS27590 (KLVA_53510) | 150676..150867 | - | 192 | WP_080895885.1 | hypothetical protein | - |
KI238_RS27595 (KLVA_53520) | 150910..151416 | - | 507 | WP_046622857.1 | antirestriction protein ArdA | - |
KI238_RS27600 (KLVA_53530) | 151461..151889 | - | 429 | WP_047722632.1 | antirestriction protein | - |
KI238_RS27960 | 152338..152502 | - | 165 | Protein_160 | hypothetical protein | - |
KI238_RS27605 (KLVA_53550) | 152518..154089 | - | 1572 | WP_119867217.1 | sensor domain-containing diguanylate cyclase | - |
KI238_RS27610 (KLVA_53560) | 154500..154796 | + | 297 | WP_042937695.1 | hypothetical protein | - |
KI238_RS27965 | 155188..155418 | - | 231 | WP_032740680.1 | hypothetical protein | - |
KI238_RS27615 (KLVA_53570) | 155878..156780 | + | 903 | WP_040107984.1 | DHH family phosphoesterase | - |
KI238_RS27620 (KLVA_53580) | 156783..157208 | + | 426 | WP_114502178.1 | universal stress protein | - |
KI238_RS27625 (KLVA_53590) | 157225..158514 | + | 1290 | WP_114502179.1 | phosphopyruvate hydratase | - |
KI238_RS27630 | 158611..158985 | + | 375 | WP_094030654.1 | fluoride efflux transporter CrcB | - |
KI238_RS27635 (KLVA_53630) | 160380..161345 | - | 966 | WP_042936828.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
KI238_RS27640 (KLVA_53640) | 161345..162511 | - | 1167 | WP_114502181.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|