NZ_AP0245931..163252

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 163252 bp
Accession: NZ_AP024593        Location: 1..163252         Organism: Klebsiella variicola strain JCM 12419       Replicon: plasmid pKLVA-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KI238_RS26845 (KLVA_51990) 1..1011 + 1011 WP_042936824.1 RepB family plasmid replication initiator protein -
KI238_RS26850 (KLVA_52000) 1835..2575 - 741 WP_001515717.1 tyrosine-type recombinase/integrase -
KI238_RS27920 2905..3235 - 331 Protein_2 type II toxin-antitoxin system RelE/ParE family toxin -
KI238_RS26855 (KLVA_52010) 3222..3494 - 273 WP_153669782.1 type II toxin-antitoxin system ParD family antitoxin -
KI238_RS27925 (KLVA_52020) 3719..4237 - 519 WP_227518052.1 hypothetical protein -
KI238_RS27930 (KLVA_52030) 4426..5391 - 966 WP_227518053.1 hypothetical protein -
KI238_RS26865 (KLVA_52040) 5956..6765 - 810 WP_000654269.1 hypothetical protein -
KI238_RS26870 (KLVA_52050) 6783..7145 - 363 WP_000533745.1 hypothetical protein -
KI238_RS26875 (KLVA_52060) 8067..8831 + 765 WP_123797894.1 hypothetical protein -
KI238_RS26880 (KLVA_52070) 8834..9115 + 282 WP_123797895.1 hypothetical protein -
KI238_RS26885 (KLVA_52080) 9198..10472 + 1275 WP_049117673.1 HlyD family secretion protein -
KI238_RS26890 (KLVA_52090) 10456..12582 + 2127 WP_264754911.1 peptidase domain-containing ABC transporter -
KI238_RS26895 (KLVA_52100) 12868..13950 + 1083 WP_119867266.1 transcriptional regulator -
KI238_RS26900 (KLVA_52110) 14099..14842 + 744 WP_119867221.1 hypothetical protein -
KI238_RS26905 (KLVA_52120) 14982..15590 - 609 WP_119867222.1 toll/interleukin-1 receptor domain-containing protein -
KI238_RS26910 (KLVA_52130) 15819..16388 - 570 WP_119867223.1 hypothetical protein -
KI238_RS26915 (KLVA_52140) 16391..17533 - 1143 WP_119867224.1 toll/interleukin-1 receptor domain-containing protein -
KI238_RS26920 (KLVA_52150) 17667..19283 - 1617 WP_119867225.1 CBASS cGAMP-activated phospholipase -
KI238_RS26925 (KLVA_52160) 19445..19930 - 486 WP_119867226.1 TIR domain-containing protein -
KI238_RS26930 (KLVA_52170) 19942..20469 - 528 WP_119867227.1 toll/interleukin-1 receptor domain-containing protein -
KI238_RS26935 (KLVA_52180) 21023..21253 + 231 WP_119867228.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
KI238_RS26940 (KLVA_52190) 21250..21666 + 417 WP_119867229.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
KI238_RS26945 (KLVA_52210) 22170..23180 - 1011 WP_123797896.1 hypothetical protein -
KI238_RS26950 (KLVA_52220) 23700..23930 + 231 WP_119867231.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
KI238_RS26955 (KLVA_52230) 23927..24343 + 417 WP_119867232.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
KI238_RS26960 (KLVA_52240) 24485..24703 + 219 WP_119867233.1 hypothetical protein -
KI238_RS26965 (KLVA_52250) 24782..25108 + 327 WP_123797897.1 hypothetical protein -
KI238_RS26970 (KLVA_52260) 25348..25605 + 258 WP_119867235.1 hypothetical protein -
KI238_RS26975 (KLVA_52270) 25605..26171 + 567 WP_119867236.1 hypothetical protein -
KI238_RS26980 (KLVA_52280) 26202..26693 + 492 WP_119867237.1 DNA-binding protein -
KI238_RS26985 (KLVA_52290) 26717..27229 - 513 WP_123797898.1 hypothetical protein -
KI238_RS26990 (KLVA_52300) 27852..28637 + 786 WP_123797899.1 hypothetical protein -
KI238_RS26995 (KLVA_52310) 28800..28997 - 198 WP_123797900.1 hypothetical protein -
KI238_RS27000 (KLVA_52320) 29204..29470 + 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
KI238_RS27005 29458..29940 + 483 WP_023288256.1 GNAT family N-acetyltransferase Toxin Detail
KI238_RS27010 (KLVA_52330) 30253..30771 + 519 Protein_35 HTH-type transcriptional regulator NimR VF
KI238_RS27015 (KLVA_52340) 30914..31213 - 300 WP_101880805.1 putative quinol monooxygenase -
KI238_RS27020 (KLVA_52350) 32243..33655 - 1413 WP_119867240.1 amino acid permease -
KI238_RS27025 (KLVA_52360) 34207..35109 - 903 WP_119867241.1 LysR substrate-binding domain-containing protein -
KI238_RS27030 (KLVA_52370) 35513..36664 + 1152 WP_101880807.1 PLP-dependent aspartate aminotransferase family protein -
KI238_RS27035 36673..37602 + 930 WP_164078953.1 EamA family transporter -
KI238_RS27040 37950..39068 + 1119 Protein_41 IS110 family transposase ISEc20 Transposase
KI238_RS27050 (KLVA_52420) 40224..40919 - 696 WP_101880810.1 IS6 family transposase ISEas1 Transposase
KI238_RS27055 (KLVA_52430) 40982..41386 - 405 WP_100781753.1 Exc2 family lipoprotein -
KI238_RS27060 (KLVA_52440) 41595..42143 - 549 WP_072124330.1 thioredoxin fold domain-containing protein -
KI238_RS27065 (KLVA_52460) 42745..43920 - 1176 WP_119867244.1 MFS transporter -
KI238_RS27070 (KLVA_52470) 43925..44335 - 411 WP_072124332.1 heme-binding protein -
KI238_RS27075 (KLVA_52480) 44418..45134 - 717 WP_226330565.1 IclR family transcriptional regulator -
KI238_RS27080 (KLVA_52490) 45573..45821 + 249 WP_072124333.1 hypothetical protein -
KI238_RS27085 (KLVA_52500) 45818..46390 + 573 WP_101880773.1 hypothetical protein -
KI238_RS27090 (KLVA_52510) 46659..47009 - 351 WP_167878626.1 hypothetical protein -
KI238_RS27095 (KLVA_52520) 47144..47338 - 195 WP_164078955.1 hypothetical protein -
KI238_RS27100 47528..48001 - 474 Protein_53 IS3 family transposase -
KI238_RS27105 48008..49507 - 1500 WP_164078958.1 MFS transporter -
KI238_RS27935 49708..50264 - 557 Protein_55 IS3 family transposase -
KI238_RS27110 51010..52188 - 1179 WP_101880775.1 putative signaling protein VF
KI238_RS27115 (KLVA_52570) 53262..54377 + 1116 WP_101880776.1 alpha/beta fold hydrolase -
KI238_RS27120 (KLVA_52580) 54424..54810 + 387 WP_100730232.1 hypothetical protein -
KI238_RS27125 (KLVA_52590) 55356..56045 + 690 WP_101880777.1 YafY family protein -
KI238_RS27130 (KLVA_52600) 56116..56862 + 747 WP_101880778.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
KI238_RS27135 (KLVA_52620) 57558..59321 - 1764 WP_101880780.1 putative signaling protein VF
KI238_RS27140 59983..60573 + 591 WP_052251507.1 hypothetical protein -
KI238_RS27145 (KLVA_52630) 60614..61753 + 1140 WP_119867245.1 MFS transporter -
KI238_RS27150 (KLVA_52640) 61726..62955 + 1230 WP_040107892.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
KI238_RS27155 (KLVA_52650) 63045..64205 + 1161 WP_233436456.1 aromatic amino acid transport family protein -
KI238_RS27160 (KLVA_52660) 64250..66046 + 1797 WP_063267099.1 alpha-glucosidase -
KI238_RS27165 (KLVA_52670) 66842..67987 + 1146 WP_119867246.1 ABC transporter permease -
KI238_RS27170 (KLVA_52680) 67981..68781 + 801 WP_119867247.1 putative ribonucleotide transport ATP-binding protein mkl VF
KI238_RS27175 (KLVA_52690) 68786..69724 + 939 WP_040107887.1 MlaD family protein -
KI238_RS27180 (KLVA_52700) 69724..70368 + 645 WP_119867248.1 ABC-type transport auxiliary lipoprotein family protein -
KI238_RS28000 71222..71326 + 105 Protein_71 hypothetical protein -
KI238_RS27940 71332..71492 - 161 Protein_72 SOS response-associated peptidase -
KI238_RS27185 (KLVA_52710) 71643..72272 + 630 WP_119867249.1 DNA-binding protein -
KI238_RS27190 (KLVA_52720) 72297..73004 - 708 WP_119867250.1 RES domain-containing protein -
KI238_RS27195 73519..73674 + 156 Protein_75 IS110 family transposase IS1663 Transposase
KI238_RS27200 (KLVA_52730) 73856..74275 + 420 WP_012540023.1 ASCH domain-containing protein -
KI238_RS27205 (KLVA_52740) 74711..77020 + 2310 WP_119867251.1 TerB N-terminal domain-containing protein -
KI238_RS27210 (KLVA_52750) 77024..78340 + 1317 WP_004152291.1 ATP-binding protein -
KI238_RS27215 (KLVA_52760) 78337..80532 + 2196 WP_000093087.1 DEAD/DEAH box helicase -
KI238_RS27220 (KLVA_52780) 82110..82475 - 366 WP_040107964.1 DUF596 domain-containing protein -
KI238_RS27225 (KLVA_52790) 82486..84711 - 2226 Protein_81 DUF637 domain-containing protein -
KI238_RS27230 (KLVA_52800) 84734..84925 - 192 Protein_82 IS110 family transposase IS1618 Transposase
KI238_RS27235 (KLVA_52810) 85294..85599 - 306 WP_049011000.1 DUF596 domain-containing protein -
KI238_RS27240 (KLVA_52820) 85679..91021 - 5343 WP_119867252.1 16S rRNA endonuclease CdiA VF
KI238_RS27245 (KLVA_52830) 91074..92750 - 1677 WP_065810617.1 Hemolysin transporter protein ShlB VF
KI238_RS27250 (KLVA_52840) 93763..94620 - 858 WP_071080863.1 incFII family plasmid replication initiator RepA -
KI238_RS28005 94633..94846 - 214 Protein_87 protein CopA/IncA -
KI238_RS27260 (KLVA_52850) 94907..95185 - 279 WP_042922329.1 replication regulatory protein RepA -
KI238_RS27265 (KLVA_52860) 95506..96057 - 552 WP_109883092.1 Phospholipase D VF
KI238_RS27945 96162..96242 - 81 Protein_90 hypothetical protein -
KI238_RS27270 (KLVA_52870) 96344..96605 - 262 Protein_91 bacteriocin immunity protein -
KI238_RS27275 (KLVA_52890) 96607..97781 - 1175 Protein_92 hypothetical protein -
KI238_RS27280 (KLVA_52900) 98138..98683 + 546 WP_071080859.1 hypothetical protein -
KI238_RS27285 (KLVA_52910) 98898..99245 - 348 WP_023317518.1 DUF6404 family protein -
KI238_RS27290 (KLVA_52920) 99265..99861 - 597 WP_004178053.1 fertility inhibition protein FinO -
KI238_RS27295 (KLVA_52930) 100018..100743 - 726 WP_119867255.1 type-F conjugative transfer system pilin acetylase TraX -
KI238_RS27300 (KLVA_52940) 100833..106091 - 5259 WP_119867256.1 Multifunctional conjugation protein TraI Relaxase
KI238_RS27305 (KLVA_52950) 106091..108418 - 2328 WP_119867257.1 type IV conjugative transfer system coupling protein TraD -
KI238_RS27310 (KLVA_52960) 108780..109511 - 732 WP_004152629.1 conjugal transfer complement resistance protein TraT -
KI238_RS27315 (KLVA_52980) 109924..110457 - 534 WP_114501468.1 hypothetical protein -
KI238_RS27320 (KLVA_52990) 110468..113311 - 2844 WP_119867258.1 conjugal transfer mating-pair stabilization protein TraG -
KI238_RS27325 (KLVA_53000) 113311..114690 - 1380 WP_072198238.1 conjugal transfer pilus assembly protein TraH -
KI238_RS27330 (KLVA_53010) 114668..115111 - 444 WP_023158001.1 F-type conjugal transfer protein TrbF -
KI238_RS27335 (KLVA_53020) 115157..115714 - 558 WP_032441889.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
KI238_RS27340 (KLVA_53030) 115686..115925 - 240 WP_023316407.1 type-F conjugative transfer system pilin chaperone TraQ -
KI238_RS27345 (KLVA_53040) 115936..116688 - 753 WP_042934721.1 type-F conjugative transfer system pilin assembly protein TraF -
KI238_RS27350 (KLVA_53050) 116709..117035 - 327 WP_064144773.1 hypothetical protein -
KI238_RS27355 (KLVA_53060) 117046..117273 - 228 WP_065808180.1 conjugal transfer protein TrbE -
KI238_RS27360 (KLVA_53070) 117263..117544 - 282 WP_064144771.1 hypothetical protein -
KI238_RS27365 (KLVA_53080) 117577..119532 - 1956 WP_119867267.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
KI238_RS27370 (KLVA_53090) 119529..119912 - 384 WP_065808179.1 hypothetical protein -
KI238_RS27375 (KLVA_53100) 119909..120547 - 639 WP_065901066.1 type-F conjugative transfer system pilin assembly protein TrbC -
KI238_RS27380 (KLVA_53110) 120560..121519 - 960 WP_168712236.1 conjugal transfer pilus assembly protein TraU -
KI238_RS27385 (KLVA_53120) 121563..122189 - 627 WP_065808176.1 type-F conjugative transfer system protein TraW -
KI238_RS27390 (KLVA_53130) 122189..122578 - 390 WP_020326931.1 type-F conjugative transfer system protein TrbI -
KI238_RS27395 (KLVA_53140) 122578..125217 - 2640 WP_119867259.1 type IV secretion system protein TraC -
KI238_RS27400 125288..125686 - 399 WP_164078962.1 hypothetical protein -
KI238_RS27405 (KLVA_53150) 125694..125984 - 291 WP_119867261.1 hypothetical protein -
KI238_RS27410 (KLVA_53160) 125981..126385 - 405 WP_119867262.1 hypothetical protein -
KI238_RS27415 (KLVA_53170) 126452..126769 - 318 WP_023307544.1 hypothetical protein -
KI238_RS27420 (KLVA_53180) 126770..126988 - 219 WP_004171484.1 hypothetical protein -
KI238_RS27425 (KLVA_53190) 127012..127302 - 291 WP_032429299.1 hypothetical protein -
KI238_RS27430 127307..127717 - 411 WP_023292154.1 hypothetical protein -
KI238_RS27435 127849..128418 - 570 WP_032429300.1 type IV conjugative transfer system lipoprotein TraV -
KI238_RS27440 (KLVA_53210) 128437..128622 - 186 WP_038990989.1 hypothetical protein -
KI238_RS27445 (KLVA_53220) 128619..130043 - 1425 WP_071080849.1 F-type conjugal transfer pilus assembly protein TraB -
KI238_RS27450 (KLVA_53230) 130043..130783 - 741 WP_004152497.1 type-F conjugative transfer system secretin TraK -
KI238_RS27455 (KLVA_53240) 130770..131336 - 567 WP_020316627.1 type IV conjugative transfer system protein TraE -
KI238_RS27460 (KLVA_53250) 131356..131661 - 306 WP_004178059.1 type IV conjugative transfer system protein TraL -
KI238_RS27465 (KLVA_53260) 131675..132043 - 369 WP_049155512.1 type IV conjugative transfer system pilin TraA -
KI238_RS27470 132112..132312 - 201 WP_071080869.1 TraY domain-containing protein -
KI238_RS27475 (KLVA_53270) 132396..133100 - 705 WP_071080847.1 hypothetical protein -
KI238_RS27480 (KLVA_53280) 133338..133730 - 393 WP_020805752.1 conjugal transfer relaxosome DNA-binding protein TraM -
KI238_RS27485 (KLVA_53290) 134234..134641 + 408 WP_223170089.1 hypothetical protein VF
KI238_RS27490 (KLVA_53300) 134679..135209 - 531 WP_023292160.1 antirestriction protein -
KI238_RS27495 (KLVA_53310) 135834..136667 - 834 WP_071080845.1 N-6 DNA methylase -
KI238_RS27500 (KLVA_53320) 136714..136944 - 231 WP_119867212.1 hypothetical protein -
KI238_RS27505 (KLVA_53330) 137032..137379 - 348 WP_038990975.1 hypothetical protein -
KI238_RS27510 (KLVA_53340) 137446..137826 - 381 WP_119867213.1 hypothetical protein -
KI238_RS27515 (KLVA_53350) 138731..138847 - 117 WP_223176086.1 type I toxin-antitoxin system Hok family toxin -
KI238_RS27950 138795..138947 - 153 WP_224230667.1 DUF5431 family protein -
KI238_RS27520 (KLVA_53360) 139100..139525 - 426 WP_109883074.1 glutaredoxin-dependent arsenate reductase -
KI238_RS27525 (KLVA_53370) 139538..140827 - 1290 WP_119867214.1 arsenic transporter -
KI238_RS27530 (KLVA_53380) 140872..141192 - 321 WP_109883073.1 transcriptional regulator -
KI238_RS27535 (KLVA_53390) 141278..141976 + 699 WP_015572073.1 arsenical resistance protein ArsH -
KI238_RS27540 (KLVA_53400) 142134..142649 + 516 WP_032664851.1 hypothetical protein -
KI238_RS27545 143222..144590 - 1369 Protein_147 IS3 family transposase ISKpn8 Transposase
KI238_RS27550 (KLVA_53430) 144778..145104 - 327 WP_038992719.1 hypothetical protein -
KI238_RS27555 (KLVA_53440) 145101..145829 - 729 WP_109883063.1 plasmid SOS inhibition protein A -
KI238_RS27560 (KLVA_53450) 145826..146257 - 432 WP_038992715.1 conjugation system SOS inhibitor PsiB -
KI238_RS27565 (KLVA_53460) 146302..148302 - 2001 WP_119867215.1 ParB/RepB/Spo0J family partition protein -
KI238_RS27570 (KLVA_53470) 148371..148619 - 249 WP_119867216.1 DUF905 domain-containing protein -
KI238_RS27575 (KLVA_53480) 148668..149210 - 543 WP_040107913.1 single-stranded DNA-binding protein -
KI238_RS27955 149241..149444 - 204 WP_227518051.1 single-stranded DNA-binding protein -
KI238_RS27580 (KLVA_53490) 149879..150199 - 321 WP_042938876.1 hypothetical protein -
KI238_RS27585 150234..150488 - 255 Protein_156 DNA polymerase III subunit theta -
KI238_RS27590 (KLVA_53510) 150676..150867 - 192 WP_080895885.1 hypothetical protein -
KI238_RS27595 (KLVA_53520) 150910..151416 - 507 WP_046622857.1 antirestriction protein ArdA -
KI238_RS27600 (KLVA_53530) 151461..151889 - 429 WP_047722632.1 antirestriction protein -
KI238_RS27960 152338..152502 - 165 Protein_160 hypothetical protein -
KI238_RS27605 (KLVA_53550) 152518..154089 - 1572 WP_119867217.1 sensor domain-containing diguanylate cyclase -
KI238_RS27610 (KLVA_53560) 154500..154796 + 297 WP_042937695.1 hypothetical protein -
KI238_RS27965 155188..155418 - 231 WP_032740680.1 hypothetical protein -
KI238_RS27615 (KLVA_53570) 155878..156780 + 903 WP_040107984.1 DHH family phosphoesterase -
KI238_RS27620 (KLVA_53580) 156783..157208 + 426 WP_114502178.1 universal stress protein -
KI238_RS27625 (KLVA_53590) 157225..158514 + 1290 WP_114502179.1 phosphopyruvate hydratase -
KI238_RS27630 158611..158985 + 375 WP_094030654.1 fluoride efflux transporter CrcB -
KI238_RS27635 (KLVA_53630) 160380..161345 - 966 WP_042936828.1 ParB/RepB/Spo0J family plasmid partition protein -
KI238_RS27640 (KLVA_53640) 161345..162511 - 1167 WP_114502181.1 Sporulation initiation inhibitor protein Soj VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance