MGE detailed information
MGE type: Prophage MGE length: 69209 bp
Accession: NZ_AP024203 Location: 2298645..2367853 Organism: Staphylococcus aureus strain SA23-1 Replicon: chromosome
Accession: NZ_AP024203 Location: 2298645..2367853 Organism: Staphylococcus aureus strain SA23-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SA231_RS11235 (2294710) | 2294710..2296089 | - | 1380 | WP_229344980.1 | ATP-dependent DNA helicase RecQ | - |
| SA231_RS11240 (2296079) | 2296079..2297032 | - | 954 | WP_001163808.1 | helix-turn-helix domain-containing protein | - |
| SA231_RS11245 (2297140) | 2297140..2297388 | + | 249 | WP_001151999.1 | ferredoxin | - |
| SA231_RS11250 (2297494) | 2297494..2298039 | - | 546 | WP_001186906.1 | ECF transporter S component | - |
| SA231_RS11255 (2298645) | 2298645..2299559 | - | 915 | WP_000476856.1 | DUF1672 domain-containing protein | - |
| SA231_RS11260 (2299650) | 2299650..2299865 | - | 216 | WP_000126130.1 | hypothetical protein | - |
| SA231_RS11265 (2300587) | 2300587..2302041 | - | 1455 | WP_000909213.1 | N-acetylmuramoyl-L-alanine amidase | - |
| SA231_RS11270 (2302052) | 2302052..2302354 | - | 303 | WP_000339146.1 | phage holin | - |
| SA231_RS11275 (2302490) | 2302490..2302789 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| SA231_RS11280 (2302835) | 2302835..2302999 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| SA231_RS11285 (2302992) | 2302992..2303381 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| SA231_RS11290 (2303381) | 2303381..2304847 | - | 1467 | WP_031775920.1 | BppU family phage baseplate upper protein | - |
| SA231_RS11295 (2304847) | 2304847..2306757 | - | 1911 | WP_044425964.1 | hypothetical protein | - |
| SA231_RS11300 (2306773) | 2306773..2307063 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| SA231_RS11305 (2307063) | 2307063..2308646 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| SA231_RS11310 (2308655) | 2308655..2309479 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| SA231_RS11315 (2309479) | 2309479..2315679 | - | 6201 | WP_031860857.1 | phage tail tape measure protein | - |
| SA231_RS11320 (2315693) | 2315693..2315851 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| SA231_RS11325 (2315902) | 2315902..2316243 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| SA231_RS11330 (2316301) | 2316301..2316756 | - | 456 | WP_000169128.1 | Ig-like domain-containing protein | - |
| SA231_RS11335 (2316848) | 2316848..2317489 | - | 642 | WP_000807536.1 | phage tail protein | - |
| SA231_RS11340 (2317524) | 2317524..2317919 | - | 396 | WP_229344983.1 | hypothetical protein | - |
| SA231_RS11345 (2317920) | 2317920..2318321 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| SA231_RS11350 (2318318) | 2318318..2318650 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| SA231_RS11355 (2318662) | 2318662..2318940 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| SA231_RS11360 (2319009) | 2319009..2320172 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| SA231_RS11365 (2320184) | 2320184..2320957 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| SA231_RS11370 (2320941) | 2320941..2322179 | - | 1239 | WP_001100669.1 | phage portal protein | - |
| SA231_RS11375 (2322184) | 2322184..2323875 | - | 1692 | WP_000152858.1 | terminase large subunit | - |
| SA231_RS11380 (2323865) | 2323865..2324170 | - | 306 | WP_000778935.1 | P27 family phage terminase small subunit | - |
| SA231_RS11385 (2324295) | 2324295..2324615 | - | 321 | WP_000596031.1 | HNH endonuclease signature motif containing protein | - |
| SA231_RS11390 (2324772) | 2324772..2325209 | - | 438 | WP_000513704.1 | transcriptional regulator | - |
| SA231_RS11395 (2325222) | 2325222..2326589 | - | 1368 | WP_001793488.1 | DEAD/DEAH box helicase | - |
| SA231_RS11400 (2326570) | 2326570..2326860 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| SA231_RS11405 (2326994) | 2326994..2327092 | + | 99 | WP_001801650.1 | hypothetical protein | - |
| SA231_RS11410 (2327201) | 2327201..2329648 | - | 2448 | WP_000884870.1 | VapE family protein | - |
| SA231_RS11415 (2329936) | 2329936..2330136 | - | 201 | WP_000265252.1 | DUF1514 family protein | - |
| SA231_RS11420 (2330204) | 2330204..2330356 | - | 153 | WP_000595263.1 | transcriptional activator RinB | - |
| SA231_RS11425 (2330353) | 2330353..2330559 | - | 207 | WP_000195810.1 | DUF1381 domain-containing protein | - |
| SA231_RS11430 (2330596) | 2330596..2331129 | - | 534 | WP_063653166.1 | dUTPase | - |
| SA231_RS11435 (2331144) | 2331144..2331305 | - | 162 | WP_000889684.1 | hypothetical protein | - |
| SA231_RS11440 (2331306) | 2331306..2331479 | - | 174 | WP_000028424.1 | hypothetical protein | Antitoxin Detail |
| SA231_RS11445 (2331469) | 2331469..2331720 | - | 252 | WP_031267622.1 | DUF1024 family protein | Toxin Detail |
| SA231_RS11450 (2331713) | 2331713..2332020 | - | 308 | Protein_2249 | hypothetical protein | - |
| SA231_RS11455 (2332017) | 2332017..2332364 | - | 348 | WP_000979209.1 | YopX family protein | - |
| SA231_RS11460 (2332361) | 2332361..2332741 | - | 381 | WP_001668982.1 | hypothetical protein | - |
| SA231_RS11465 (2332744) | 2332744..2332950 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| SA231_RS11470 (2332964) | 2332964..2333212 | - | 249 | WP_060474161.1 | SAV1978 family virulence-associated passenger protein | - |
| SA231_RS11475 (2333212) | 2333212..2333466 | - | 255 | WP_000022722.1 | DUF3310 domain-containing protein | - |
| SA231_RS11480 (2333463) | 2333463..2333867 | - | 405 | WP_044426014.1 | SA1788 family PVL leukocidin-associated protein | - |
| SA231_RS11485 (2333867) | 2333867..2334052 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| SA231_RS11490 (2334065) | 2334065..2336017 | - | 1953 | WP_229345138.1 | DNA polymerase | - |
| SA231_RS11495 (2336085) | 2336085..2336666 | - | 582 | WP_176426981.1 | DUF2815 family protein | - |
| SA231_RS11500 (2336692) | 2336692..2337858 | - | 1167 | WP_000762547.1 | DUF2800 domain-containing protein | - |
| SA231_RS11505 (2337855) | 2337855..2338217 | - | 363 | WP_229344986.1 | hypothetical protein | - |
| SA231_RS11510 (2338232) | 2338232..2338555 | - | 324 | WP_000175001.1 | hypothetical protein | - |
| SA231_RS11515 (2338634) | 2338634..2338795 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| SA231_RS11520 (2338808) | 2338808..2339071 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| SA231_RS11525 (2339096) | 2339096..2339311 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| SA231_RS11530 (2339366) | 2339366..2339731 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| SA231_RS11535 (2339700) | 2339700..2339945 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| SA231_RS11540 (2340001) | 2340001..2340210 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| SA231_RS11545 (2340200) | 2340200..2340343 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| SA231_RS11550 (2340372) | 2340372..2341148 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| SA231_RS11555 (2341162) | 2341162..2341398 | - | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| SA231_RS11560 (2341550) | 2341550..2341864 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| SA231_RS11565 (2341877) | 2341877..2342338 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| SA231_RS11570 (2342356) | 2342356..2342940 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| SA231_RS11575 (2343170) | 2343170..2343316 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| SA231_RS11580 (2343313) | 2343313..2343927 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| SA231_RS11585 (2344053) | 2344053..2345258 | + | 1206 | WP_020444721.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| SA231_RS11590 (2345301) | 2345301..2347328 | - | 2028 | WP_229344989.1 | hypothetical protein | - |
| SA231_RS11595 (2347321) | 2347321..2348250 | - | 930 | WP_001622322.1 | DUF1672 domain-containing protein | - |
| SA231_RS11600 (2348502) | 2348502..2350253 | - | 1752 | WP_000987760.1 | two-component system sensor histidine kinase SrrB | - |
| SA231_RS11605 (2350234) | 2350234..2350959 | - | 726 | WP_000064074.1 | Transcriptional regulatory protein SrrA | VF |
| SA231_RS11610 (2351092) | 2351092..2351829 | - | 738 | WP_000159580.1 | pseudouridine synthase | - |
| SA231_RS11615 (2351822) | 2351822..2352364 | - | 543 | WP_000368647.1 | SMC-Scp complex subunit ScpB | - |
| SA231_RS11620 (2352357) | 2352357..2353088 | - | 732 | WP_000273372.1 | segregation/condensation protein A | - |
| SA231_RS11625 (2353180) | 2353180..2353686 | + | 507 | WP_001183432.1 | DUF309 domain-containing protein | - |
| SA231_RS11630 (2353764) | 2353764..2354651 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| SA231_RS11635 (2354700) | 2354700..2355149 | - | 450 | WP_000392691.1 | Fur family transcriptional regulator | - |
| SA231_RS11640 (2355254) | 2355254..2355796 | - | 543 | WP_000365244.1 | NUDIX hydrolase | - |
| SA231_RS11645 (2355878) | 2355878..2356786 | + | 909 | WP_001171342.1 | aldo/keto reductase | - |
| SA231_RS11650 (2357002) | 2357002..2357250 | - | 249 | WP_000995799.1 | hypothetical protein | - |
| SA231_RS11655 (2357266) | 2357266..2358021 | - | 756 | WP_000678241.1 | SDR family oxidoreductase | - |
| SA231_RS11660 (2358163) | 2358163..2358978 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| SA231_RS11665 (2359083) | 2359083..2360003 | - | 921 | WP_000454059.1 | ribonuclease Z | - |
| SA231_RS11670 (2360316) | 2360316..2361800 | + | 1485 | WP_000105075.1 | glucose-6-phosphate dehydrogenase | - |
| SA231_RS11675 (2362030) | 2362030..2362896 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| SA231_RS11680 (2362979) | 2362979..2364628 | - | 1650 | WP_001041920.1 | alpha-glucosidase | - |
| SA231_RS11685 (2364644) | 2364644..2365663 | - | 1020 | WP_000256333.1 | HTH-type transcriptional regulator MalR | VF |
| SA231_RS11690 (2365682) | 2365682..2365918 | - | 237 | WP_072468927.1 | hypothetical protein | - |
| SA231_RS11695 (2365857) | 2365857..2366228 | - | 372 | WP_000413439.1 | VOC family protein | - |
| SA231_RS11700 (2366447) | 2366447..2367853 | - | 1407 | WP_000193707.1 | 6-phosphogluconate dehydrogenase, decarboxylating | VF |
| SA231_RS11705 (2367921) | 2367921..2369054 | - | 1134 | WP_000606699.1 | tripeptidase T | - |
| SA231_RS11710 (2369317) | 2369317..2369496 | + | 180 | WP_001789875.1 | stressosome-associated protein Prli42 | - |
| SA231_RS11715 (2369623) | 2369623..2370603 | - | 981 | WP_000916199.1 | aromatic acid exporter family protein | - |
| SA231_RS11720 (2370617) | 2370617..2371054 | - | 438 | WP_000367419.1 | bacilliredoxin BrxB | - |
| SA231_RS11725 (2371403) | 2371403..2372677 | - | 1275 | WP_000406833.1 | dihydrolipoamide acetyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|