MGE detailed information
MGE type: Prophage MGE length: 52655 bp
Accession: NZ_AP023317 Location: 2106458..2159112 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4681 Replicon: chromosome
Accession: NZ_AP023317 Location: 2106458..2159112 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4681 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5693_RS10245 () | 2102651..2103547 | - | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| K5693_RS10250 () | 2103967..2104578 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| K5693_RS10255 () | 2104587..2105597 | + | 1011 | WP_000568508.1 | Holliday junction branch migration DNA helicase RuvB | - |
| K5693_RS10260 () | 2105676..2106461 | - | 786 | WP_000571508.1 | zinc ABC transporter permease subunit ZnuB | - |
| K5693_RS10265 () | 2106458..2107213 | - | 756 | WP_000203014.1 | Zinc import ATP-binding protein ZnuC | VF |
| K5693_RS10270 () | 2107292..2108236 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| K5693_RS10275 () | 2108252..2109571 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| K5693_RS10280 () | 2109688..2110659 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| K5693_RS10285 () | 2110732..2112174 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| K5693_RS10290 () | 2112298..2113167 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| K5693_RS10295 () | 2113509..2114984 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| K5693_RS10300 () | 2115219..2117030 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| K5693_RS10305 () | 2117068..2117709 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| K5693_RS10310 () | 2117809..2118987 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| K5693_RS10315 () | 2119118..2119408 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| K5693_RS10320 () | 2119476..2119829 | + | 354 | WP_001042119.1 | protein YebF | - |
| K5693_RS10325 () | 2119923..2120582 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| K5693_RS10330 () | 2120795..2122846 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| K5693_RS10335 () | 2122881..2123579 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| K5693_RS10340 () | 2123603..2124259 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| K5693_RS10345 () | 2124367..2124597 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| K5693_RS10350 () | 2124735..2125109 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| K5693_RS10355 () | 2125110..2125985 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| K5693_RS10360 () | 2126002..2126355 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2126455..2126600 | - | 146 | - | - | Antitoxin Detail |
| - | 2126495..2126598 | + | 104 | - | - | Toxin Detail |
| K5693_RS10365 () | 2126729..2127652 | - | 924 | Protein_2037 | hypothetical protein ; Integrase | Integrase |
| K5693_RS25155 () | 2127916..2128377 | - | 462 | Protein_2038 | DNA breaking-rejoining protein | - |
| K5693_RS10375 () | 2128366..2128557 | + | 192 | Protein_2039 | glycoside hydrolase family 19 protein | - |
| K5693_RS10380 () | 2128611..2129144 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| K5693_RS10385 () | 2129401..2129568 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| K5693_RS10390 () | 2129633..2129821 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| K5693_RS10395 () | 2129876..2130136 | + | 261 | Protein_2043 | DUF1441 family protein | - |
| K5693_RS10400 () | 2130351..2130695 | + | 345 | Protein_2044 | macro domain-containing protein | - |
| K5693_RS10405 () | 2130705..2131175 | + | 471 | Protein_2045 | tail fiber assembly protein | - |
| K5693_RS10410 () | 2131272..2131472 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| K5693_RS25160 () | 2131862..2132042 | - | 181 | Protein_2047 | IS3 family transposase | - |
| K5693_RS10415 () | 2132033..2132134 | + | 102 | Protein_2048 | arsenic transporter | - |
| K5693_RS25165 () | 2132756..2132988 | + | 233 | Protein_2049 | helix-turn-helix domain-containing protein | - |
| K5693_RS10430 () | 2133315..2133929 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| K5693_RS10435 () | 2133939..2134097 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| K5693_RS10440 () | 2134230..2135144 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| K5693_RS10445 () | 2136457..2136879 | - | 423 | Protein_2053 | hypothetical protein ; Integrase | Integrase |
| K5693_RS10450 () | 2136949..2138143 | + | 1195 | Protein_2054 | IS256 family transposase IS285 | Transposase |
| K5693_RS10455 () | 2138289..2138429 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| K5693_RS10460 () | 2138595..2138864 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| K5693_RS10465 () | 2139234..2139653 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| K5693_RS10470 () | 2140041..2140517 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| K5693_RS10475 () | 2140847..2141242 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| K5693_RS10480 () | 2141925..2142647 | + | 723 | WP_125670228.1 | Guanine nucleotide exchange factor sopE2 | VF |
| K5693_RS10485 () | 2142932..2143096 | + | 165 | WP_001134856.1 | membrane protein | - |
| K5693_RS10490 () | 2143320..2143970 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| K5693_RS10495 () | 2143989..2144180 | - | 192 | WP_000457836.1 | YebW family protein | - |
| K5693_RS10500 () | 2144291..2144527 | - | 237 | WP_024131108.1 | YebV family protein | - |
| K5693_RS10505 () | 2144645..2146084 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| K5693_RS10510 () | 2146162..2148795 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| K5693_RS10515 () | 2148764..2150047 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| K5693_RS10520 () | 2150176..2150673 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| K5693_RS10525 () | 2150771..2151457 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| K5693_RS10530 () | 2151477..2153525 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| K5693_RS10535 () | 2153719..2154600 | + | 882 | WP_000984498.1 | protease HtpX | - |
| K5693_RS10540 () | 2154648..2156021 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| K5693_RS10545 () | 2156197..2156988 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| K5693_RS10550 () | 2157200..2157439 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| K5693_RS10555 () | 2157597..2157740 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| K5693_RS10560 () | 2157811..2158098 | + | 288 | WP_001000660.1 | YebO family protein | - |
| K5693_RS10565 () | 2158747..2158890 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| K5693_RS10570 () | 2158903..2159112 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| K5693_RS10575 () | 2159332..2161077 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| K5693_RS10580 () | 2161143..2161952 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| K5693_RS10585 () | 2161949..2162515 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| K5693_RS10590 () | 2162925..2163383 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.008 |