NZ_AP023313847804..859129

MGE detailed information

MGE type: Genomic_island        MGE length: 11326 bp
Accession: NZ_AP023313        Location: 847804..859129         Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4605       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
K5670_RS04065 (843250) 843250..844348 + 1099 WP_010989230.1 peptide chain release factor 2 -
K5670_RS04070 (844358) 844358..845875 + 1518 WP_000003339.1 lysine--tRNA ligase -
K5670_RS04075 (845951) 845951..846496 - 546 WP_000133994.1 isopentenyl-diphosphate Delta-isomerase -
K5670_RS04080 (846761) 846761..847519 + 759 WP_000244329.1 amidase activator ActS -
K5670_RS04090 (847804) 847804..848610 - 807 WP_010989071.1 DUF1460 domain-containing protein -
K5670_RS04095 (848885) 848885..849136 - 252 WP_001540858.1 hypothetical protein -
K5670_RS04100 (849313) 849313..849540 + 228 WP_000557549.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
K5670_RS04105 (849540) 849540..849938 + 399 WP_000911336.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
K5670_RS04110 (850744) 850744..851280 + 537 WP_001038506.1 Attachment invasion locus protein VF
K5670_RS04115 (851327) 851327..851959 + 633 WP_000835265.1 YfdX family protein -
K5670_RS04120 (852678) 852678..853262 + 585 WP_001244638.1 putative fimbrial-like protein YbgD VF
K5670_RS04125 (853382) 853382..855871 + 2490 WP_000705483.1 Outer membrane usher protein PapC VF
K5670_RS04130 (855912) 855912..856655 + 744 WP_000798504.1 Chaperone protein PapD VF
K5670_RS04135 (856652) 856652..857728 + 1077 WP_000141329.1 outer membrane protein -
K5670_RS04140 (857872) 857872..858384 + 513 WP_000336259.1 CaiF/GrlA family transcriptional regulator -
K5670_RS04145 (858371) 858371..859129 + 759 WP_000134791.1 transcriptional regulator -
K5670_RS04150 (859339) 859339..860199 - 861 WP_000503684.1 nickel/cobalt efflux protein RcnA -
K5670_RS04155 (860321) 860321..860593 + 273 WP_000019953.1 Ni(II)/Co(II)-binding transcriptional repressor RcnR -
K5670_RS04160 (860624) 860624..861853 - 1230 WP_000036825.1 amino acid permease -
K5670_RS04165 (861995) 861995..862450 - 456 WP_001519547.1 multidrug/biocide efflux PACE transporter -
K5670_RS04170 (862554) 862554..863417 + 864 WP_001270766.1 LysR family transcriptional regulator -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Genomic island TA439 NC_003197 3186004..3197296 0.004
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 Genomic island TA25956 NC_016810 3207430..3218010 0.002
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S Genomic island TA26056 NC_016856 3205849..3216429 0.002
Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 Genomic island TA297244 UFRD01000002 4451871..4463194 0.001