MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_AP023309 Location: 3646167..3660140 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4578 Replicon: chromosome
Accession: NZ_AP023309 Location: 3646167..3660140 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4578 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5680_RS17870 () | 3641738..3644182 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| K5680_RS17875 () | 3644291..3645058 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| K5680_RS17880 () | 3645429..3645836 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| K5680_RS17885 () | 3646167..3646886 | + | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| K5680_RS17890 () | 3646890..3647105 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| K5680_RS17895 () | 3647222..3648169 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| K5680_RS17900 () | 3648661..3648901 | - | 241 | Protein_3520 | PerC family transcriptional regulator | - |
| K5680_RS17905 () | 3648984..3649805 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| K5680_RS17910 () | 3650211..3650681 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| K5680_RS17915 () | 3650703..3653213 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| K5680_RS17920 () | 3653237..3653974 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| K5680_RS17925 () | 3654058..3654570 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| K5680_RS17930 () | 3655320..3656024 | - | 705 | Protein_3526 | integrase core domain-containing protein | - |
| K5680_RS17935 () | 3656077..3656325 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| K5680_RS17940 () | 3656427..3656735 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| K5680_RS17945 () | 3656818..3656991 | - | 174 | WP_088131292.1 | RHS repeat-associated core domain-containing protein | - |
| - | 3657019..3657441 | - | 423 | - | - | Antitoxin Detail |
| K5680_RS17950 () | 3657176..3657451 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| K5680_RS17955 () | 3657504..3657941 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| K5680_RS17960 () | 3658504..3658950 | - | 447 | WP_000935097.1 | protein SciX | - |
| K5680_RS17965 () | 3658944..3659813 | - | 870 | Protein_3533 | Protein RhsC | VF |
| K5680_RS17970 () | 3659877..3660140 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| K5680_RS17975 () | 3660134..3664228 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| K5680_RS17980 () | 3664247..3664693 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |