MGE detailed information
MGE type: Conjugative plasmid MGE length: 131843 bp
Accession: NZ_AP023301 Location: 1..131843 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4445 Replicon: plasmid L-4445 strain 4[5]12:i:-
Accession: NZ_AP023301 Location: 1..131843 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4445 Replicon: plasmid L-4445 strain 4[5]12:i:-
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5630_RS23880 () | 101..358 | + | 258 | WP_001541895.1 | replication regulatory protein RepA | - |
| K5630_RS23885 () | 590..664 | + | 75 | WP_061357229.1 | RepA leader peptide Tap | - |
| K5630_RS23890 () | 657..1514 | + | 858 | WP_039002220.1 | incFII family plasmid replication initiator RepA | - |
| K5630_RS23895 () | 2480..2731 | + | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K5630_RS23900 () | 2728..3015 | + | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K5630_RS23905 () | 3090..3278 | - | 189 | Protein_5 | IS3 family transposase | - |
| K5630_RS23910 () | 3312..3812 | - | 501 | Protein_6 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| K5630_RS23915 () | 3846..4892 | - | 1047 | Protein_7 | Tn3 family transposase TnpA_Tn3 | Transposase |
| K5630_RS24885 () | 4926..5006 | - | 81 | Protein_8 | MerR family transcriptional regulator | - |
| K5630_RS23920 () | 5067..5771 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| K5630_RS23925 () | 5965..6351 | + | 387 | WP_063102497.1 | bleomycin binding protein | - |
| K5630_RS23930 () | 6671..6892 | - | 222 | WP_226909166.1 | hypothetical protein | - |
| K5630_RS23935 () | 6876..7697 | - | 822 | WP_039026397.1 | IS3 family transposase ISKpn40 | Transposase |
| K5630_RS23940 () | 7694..8008 | - | 315 | WP_039026396.1 | IS3 family transposase ISKpn40 | Transposase |
| K5630_RS23945 () | 8203..8583 | - | 381 | WP_039026395.1 | diacylglycerol kinase | - |
| K5630_RS23950 () | 8701..10326 | - | 1626 | WP_039026394.1 | Phosphoethanolamine transferase EptA | VF |
| K5630_RS23955 () | 10500..11354 | + | 855 | Protein_16 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| K5630_RS23960 () | 11389..11763 | + | 375 | Protein_17 | IS6 family transposase IS26 | Transposase |
| K5630_RS23965 () | 11906..12448 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| K5630_RS23970 () | 12461..13321 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| K5630_RS23975 () | 13464..13799 | + | 336 | Protein_20 | IS4 family transposase IS10R | Transposase |
| K5630_RS23980 () | 13848..14552 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| K5630_RS23985 () | 14811..15368 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| K5630_RS23990 () | 15551..16411 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| K5630_RS23995 () | 16669..17460 | - | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| K5630_RS24000 () | 17929..18174 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| K5630_RS24005 () | 18212..19075 | - | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| K5630_RS24010 () | 19221..19472 | - | 252 | Protein_27 | hypothetical protein | - |
| K5630_RS24015 () | 19524..20228 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K5630_RS24020 () | 20337..20594 | - | 258 | WP_231363335.1 | hypothetical protein | - |
| K5630_RS24025 () | 20696..22357 | - | 1662 | Protein_30 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| K5630_RS24030 () | 22320..22754 | + | 435 | WP_223963367.1 | isochorismatase family cysteine hydrolase | - |
| K5630_RS24035 () | 22892..23776 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| K5630_RS24040 () | 23808..25007 | - | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| K5630_RS24045 () | 25113..25763 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| K5630_RS24050 () | 25795..26037 | - | 243 | WP_000844627.1 | transposase | - |
| K5630_RS24055 () | 26095..27609 | - | 1515 | Protein_36 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| K5630_RS24060 () | 27675..28379 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K5630_RS24890 () | 28627..28914 | + | 288 | WP_230071785.1 | hypothetical protein | - |
| K5630_RS24075 () | 30291..31106 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| K5630_RS24080 () | 31193..31435 | + | 243 | Protein_41 | phosphoglucosamine mutase | - |
| K5630_RS24085 () | 31671..33164 | - | 1494 | WP_015344975.1 | IS91 family transposase ISVsa3 | Transposase |
| K5630_RS24090 () | 33276..33581 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| K5630_RS24095 () | 33609..34823 | - | 1215 | WP_058657119.1 | Bicyclomycin resistance protein | ARG |
| K5630_RS24895 () | 35040..35924 | - | 885 | WP_012728215.1 | DUF3363 domain-containing protein | - |
| K5630_RS24105 () | 35955..36785 | - | 831 | Protein_46 | IS91 family transposase ISVsa3 | Transposase |
| K5630_RS24110 () | 36849..37553 | + | 705 | WP_001067784.1 | IS6 family transposase IS1006 | Transposase |
| K5630_RS24115 () | 37638..38114 | - | 477 | WP_223171565.1 | hypothetical protein | - |
| K5630_RS24120 () | 38048..40999 | - | 2952 | WP_015344976.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| K5630_RS24125 () | 41002..41562 | - | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| K5630_RS24130 () | 41688..42038 | - | 351 | WP_071830595.1 | DUF3330 domain-containing protein | - |
| K5630_RS24135 () | 42241..43254 | - | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| K5630_RS24140 () | 43398..43895 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| K5630_RS24145 () | 44007..44297 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| K5630_RS24150 () | 44303..45141 | + | 839 | Protein_55 | Streptomycin 3''-adenylyltransferase | ARG |
| K5630_RS24155 () | 45356..46615 | + | 1260 | WP_000095725.1 | Bicyclomycin resistance protein | ARG |
| K5630_RS24160 () | 46708..47546 | + | 839 | Protein_57 | Streptomycin 3''-adenylyltransferase | ARG |
| K5630_RS24165 () | 47669..48001 | + | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| K5630_RS24170 () | 48248..48880 | - | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| K5630_RS24175 () | 48903..49133 | + | 231 | WP_136655701.1 | hypothetical protein | - |
| K5630_RS24180 () | 49141..49308 | - | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| K5630_RS24185 () | 49427..51346 | - | 1920 | WP_025989258.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| K5630_RS24190 () | 51362..51478 | - | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| K5630_RS24195 () | 51723..52190 | - | 468 | Protein_64 | conjugal transfer protein | - |
| K5630_RS24200 () | 52244..52948 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K5630_RS24205 () | 53011..53421 | + | 411 | Protein_66 | IS3 family transposase ISEhe3 | Transposase |
| K5630_RS24210 () | 53508..53703 | + | 196 | Protein_67 | serine/threonine protein kinase | - |
| K5630_RS24215 () | 53824..54564 | + | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| K5630_RS24220 () | 54849..55826 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| K5630_RS24225 () | 56582..57554 | + | 973 | Protein_70 | hypothetical protein | - |
| K5630_RS24900 () | 57713..57871 | - | 159 | WP_228955855.1 | abortive infection family protein | - |
| K5630_RS24235 () | 58019..58716 | + | 698 | WP_103215986.1 | IS1 family transposase IS1G | Transposase |
| K5630_RS24240 () | 58853..59746 | - | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| K5630_RS24245 () | 59789..60784 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| K5630_RS24250 () | 61249..63387 | + | 2139 | WP_039002805.1 | AAA family ATPase | - |
| K5630_RS24255 () | 63549..63965 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K5630_RS24260 () | 63962..64192 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| K5630_RS24905 () | 64498..65046 | + | 549 | WP_039002808.1 | hypothetical protein | - |
| K5630_RS24910 () | 65098..65928 | + | 831 | WP_223201786.1 | hypothetical protein | - |
| K5630_RS24915 () | 65979..67616 | + | 1638 | WP_223201785.1 | hypothetical protein | - |
| K5630_RS24270 () | 67879..69012 | + | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| K5630_RS24275 () | 69032..69316 | + | 285 | WP_000642771.1 | hypothetical protein | - |
| K5630_RS24280 () | 69741..69890 | - | 150 | Protein_83 | IS30 family transposase IS30D | Transposase |
| K5630_RS24285 () | 69969..71182 | + | 1214 | WP_162841971.1 | IS3 family transposase IS629 | Transposase |
| K5630_RS24290 () | 71225..72043 | - | 819 | Protein_85 | IS30 family transposase IS30D | Transposase |
| K5630_RS24295 () | 72111..73004 | + | 894 | Protein_86 | IS3 family transposase ISEhe3 | Transposase |
| K5630_RS24300 () | 73106..73387 | + | 282 | WP_000639434.1 | hypothetical protein | - |
| K5630_RS24310 () | 74295..75620 | + | 1326 | WP_021512928.1 | reactive chlorine resistance oxidoreductase RclA | - |
| K5630_RS24315 () | 75769..76473 | - | 705 | WP_065304467.1 | IS6 family transposase IS26 | Transposase |
| K5630_RS24320 () | 76464..76970 | + | 507 | WP_001505085.1 | hypothetical protein | - |
| K5630_RS24325 () | 76967..77743 | + | 777 | Protein_92 | site-specific integrase | - |
| K5630_RS24330 () | 77895..78170 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| K5630_RS24335 () | 78164..78808 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| K5630_RS24340 () | 79030..80001 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| K5630_RS24345 () | 80006..80398 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| K5630_RS24350 () | 80403..81674 | - | 1272 | WP_000457518.1 | Y-family DNA polymerase | - |
| K5630_RS24355 () | 81674..82111 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| K5630_RS24360 () | 82108..82356 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| K5630_RS24365 () | 82774..83676 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| K5630_RS24370 () | 83673..83984 | + | 312 | WP_011254640.1 | hypothetical protein | - |
| K5630_RS24375 () | 84061..84744 | + | 684 | WP_000086185.1 | DNA methylase | - |
| K5630_RS24380 () | 84745..84966 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| K5630_RS24385 () | 84896..85414 | + | 519 | WP_123325260.1 | DUF1380 family protein | - |
| K5630_RS24390 () | 85465..86241 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| K5630_RS24395 () | 86658..87083 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| K5630_RS24400 () | 87130..87552 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| K5630_RS24405 () | 87549..87740 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| K5630_RS24410 () | 88775..89005 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| K5630_RS24415 () | 89057..90418 | + | 1362 | WP_038999961.1 | DUF3560 domain-containing protein | - |
| K5630_RS24420 () | 90466..91029 | + | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| K5630_RS24920 () | 91181..91408 | + | 228 | WP_071961421.1 | hypothetical protein | - |
| K5630_RS24425 () | 91649..91855 | + | 207 | WP_000275853.1 | hypothetical protein | - |
| K5630_RS24430 () | 91881..92420 | + | 540 | WP_032332913.1 | single-stranded DNA-binding protein | - |
| K5630_RS24435 () | 92477..92710 | + | 234 | WP_000005987.1 | DUF905 family protein | - |
| K5630_RS24440 () | 92775..94733 | + | 1959 | WP_039000998.1 | ParB/RepB/Spo0J family partition protein | - |
| K5630_RS24445 () | 94788..95222 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| K5630_RS24450 () | 95219..95938 | + | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| - () | 95950..96174 | + | 225 | NuclAT_0 | - | - |
| - () | 95950..96174 | + | 225 | NuclAT_0 | - | - |
| - () | 95950..96174 | + | 225 | NuclAT_0 | - | - |
| - () | 95950..96174 | + | 225 | NuclAT_0 | - | - |
| - | 96107..96172 | + | 66 | - | - | Antitoxin Detail |
| K5630_RS24925 () | 96160..96309 | + | 150 | Protein_119 | plasmid maintenance protein Mok | - |
| K5630_RS24455 () | 96251..96376 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| K5630_RS24930 () | 96596..96826 | + | 231 | WP_001426396.1 | hypothetical protein | - |
| K5630_RS24935 () | 96824..96997 | - | 174 | Protein_122 | hypothetical protein | - |
| K5630_RS24940 () | 97067..97273 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| K5630_RS24460 () | 97298..97585 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| K5630_RS24465 () | 97708..98529 | + | 822 | WP_072795862.1 | DUF932 domain-containing protein | - |
| K5630_RS24470 () | 98826..99428 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
| K5630_RS24475 () | 99749..100132 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| K5630_RS24480 () | 100319..101008 | + | 690 | WP_039002187.1 | conjugal transfer transcriptional regulator TraJ | - |
| K5630_RS24485 () | 101101..101502 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| K5630_RS24490 () | 101535..101897 | + | 363 | WP_000994784.1 | type IV conjugative transfer system pilin TraA | - |
| K5630_RS24495 () | 101902..102213 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| K5630_RS24500 () | 102235..102801 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| K5630_RS24505 () | 102788..103516 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| K5630_RS24510 () | 103516..104943 | + | 1428 | WP_000146690.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| K5630_RS24515 () | 104933..105520 | + | 588 | WP_000002772.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| K5630_RS24520 () | 105507..105827 | + | 321 | WP_063078087.1 | conjugal transfer protein TrbD | - |
| K5630_RS24525 () | 105824..106339 | + | 516 | WP_000724019.1 | type IV conjugative transfer system lipoprotein TraV | - |
| K5630_RS24530 () | 106474..106695 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| K5630_RS24535 () | 106855..109482 | + | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| K5630_RS24540 () | 109479..109865 | + | 387 | WP_039002198.1 | type-F conjugative transfer system protein TrbI | - |
| K5630_RS24545 () | 109862..110494 | + | 633 | WP_001749440.1 | type-F conjugative transfer system protein TraW | - |
| K5630_RS24550 () | 110491..111483 | + | 993 | WP_023148235.1 | conjugal transfer pilus assembly protein TraU | - |
| K5630_RS24555 () | 111492..112130 | + | 639 | WP_000777691.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| K5630_RS24560 () | 112127..113935 | + | 1809 | WP_000821844.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| K5630_RS24565 () | 113962..114222 | + | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| K5630_RS24570 () | 114215..114958 | + | 744 | WP_039002205.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| K5630_RS24575 () | 115074..115355 | + | 282 | WP_039002206.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| K5630_RS24580 () | 115342..115887 | + | 546 | WP_000052613.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| K5630_RS24585 () | 115817..116179 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| K5630_RS24590 () | 116176..117552 | + | 1377 | WP_000982842.1 | conjugal transfer pilus assembly protein TraH | - |
| K5630_RS24595 () | 117549..120371 | + | 2823 | WP_001007048.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| K5630_RS24600 () | 120386..120889 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| K5630_RS24605 () | 120921..121652 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| K5630_RS24610 () | 121905..124085 | + | 2181 | WP_063078088.1 | type IV conjugative transfer system coupling protein TraD | - |
| K5630_RS24615 () | 124085..129355 | + | 5271 | WP_054377139.1 | Multifunctional conjugation protein TraI | Relaxase |
| K5630_RS24620 () | 129375..130118 | + | 744 | WP_039002216.1 | conjugal transfer pilus acetylase TraX | - |
| K5630_RS24625 () | 130173..130733 | + | 561 | WP_000139310.1 | fertility inhibition protein FinO | - |
| K5630_RS24630 () | 130868..131080 | + | 213 | WP_001541896.1 | ANR family transcriptional regulator | - |
| - () | 131422..131483 | - | 62 | NuclAT_1 | - | - |
| - () | 131422..131483 | - | 62 | NuclAT_1 | - | - |
| - () | 131422..131483 | - | 62 | NuclAT_1 | - | - |
| - () | 131422..131483 | - | 62 | NuclAT_1 | - | - |
| K5630_RS24635 () | 131527..131676 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|