MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_AP023292 Location: 3675529..3689502 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4233 Replicon: chromosome
Accession: NZ_AP023292 Location: 3675529..3689502 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4233 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5617_RS18060 () | 3671100..3673544 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| K5617_RS18065 () | 3673653..3674420 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| K5617_RS18070 () | 3674791..3675198 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| K5617_RS18075 () | 3675529..3676248 | + | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| K5617_RS18080 () | 3676252..3676467 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| K5617_RS18085 () | 3676584..3677531 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| K5617_RS18090 () | 3678023..3678263 | - | 241 | Protein_3557 | PerC family transcriptional regulator | - |
| K5617_RS18095 () | 3678346..3679167 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| K5617_RS18100 () | 3679573..3680043 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| K5617_RS18105 () | 3680065..3682575 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| K5617_RS18110 () | 3682599..3683336 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| K5617_RS18115 () | 3683420..3683932 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| K5617_RS18120 () | 3684682..3685386 | - | 705 | Protein_3563 | integrase core domain-containing protein | - |
| K5617_RS18125 () | 3685439..3685687 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| K5617_RS18130 () | 3685789..3686097 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| K5617_RS18135 () | 3686180..3686353 | - | 174 | WP_088131292.1 | RHS repeat-associated core domain-containing protein | - |
| - | 3686381..3686803 | - | 423 | - | - | Antitoxin Detail |
| K5617_RS18140 () | 3686538..3686813 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| K5617_RS18145 () | 3686866..3687303 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| K5617_RS18150 () | 3687866..3688312 | - | 447 | WP_000935097.1 | protein SciX | - |
| K5617_RS18155 () | 3688306..3689175 | - | 870 | Protein_3570 | Protein RhsC | VF |
| K5617_RS18160 () | 3689239..3689502 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| K5617_RS18165 () | 3689496..3693590 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| K5617_RS18170 () | 3693609..3694055 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |