MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 91989 bp
Accession: NZ_AP022479 Location: 1..91989 Organism: Escherichia coli strain STN0717-11 Replicon: plasmid pSTN0717-11-1
Accession: NZ_AP022479 Location: 1..91989 Organism: Escherichia coli strain STN0717-11 Replicon: plasmid pSTN0717-11-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF30_RS24030 () | 102..857 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| JLF30_RS24035 () | 1445..2611 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| JLF30_RS24040 () | 2611..3582 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| JLF30_RS24045 () | 4449..5351 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| JLF30_RS24050 () | 5355..5659 | + | 305 | Protein_4 | hypothetical protein | - |
| JLF30_RS24055 () | 5736..6188 | + | 453 | Protein_5 | DNA methylase | - |
| JLF30_RS24060 () | 6184..6274 | + | 91 | Protein_6 | conjugal transfer protein TraB | - |
| JLF30_RS24065 () | 6322..7932 | + | 1611 | Protein_7 | conjugal transfer mating pair stabilization protein TraG | - |
| JLF30_RS24070 () | 7916..9643 | + | 1728 | WP_134051828.1 | type IV conjugative transfer system coupling protein TraD | - |
| JLF30_RS24075 () | 9643..12894 | + | 3252 | Protein_9 | Multifunctional conjugation protein TraI | Relaxase |
| JLF30_RS24080 () | 12890..13252 | + | 363 | Protein_10 | fertility inhibition protein FinO | - |
| JLF30_RS24085 () | 13383..13595 | + | 213 | WP_013023861.1 | hypothetical protein | - |
| JLF30_RS24090 () | 14809..15462 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| JLF30_RS24095 () | 15555..15812 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| JLF30_RS24100 () | 15745..16146 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| JLF30_RS24105 () | 16395..16810 | + | 416 | Protein_15 | IS1 family transposase IS1R | Transposase |
| JLF30_RS24110 () | 16846..17391 | - | 546 | Protein_16 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JLF30_RS24115 () | 17457..18161 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JLF30_RS24120 () | 18222..18398 | + | 177 | Protein_18 | replication protein C | - |
| JLF30_RS24125 () | 18706..19521 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| JLF30_RS24130 () | 19582..20385 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| JLF30_RS24135 () | 20385..21221 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| JLF30_RS24140 () | 21275..21511 | + | 237 | WP_042005022.1 | hypothetical protein | - |
| JLF30_RS24145 () | 21543..22169 | - | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| JLF30_RS24150 () | 22275..23474 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| JLF30_RS24155 () | 23506..24366 | - | 861 | WP_000493383.1 | EamA family transporter | - |
| JLF30_RS24160 () | 24375..24881 | - | 507 | Protein_26 | transposase | - |
| JLF30_RS24165 () | 24934..25638 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| JLF30_RS24170 () | 25738..26010 | + | 273 | Protein_28 | DUF4158 domain-containing protein | - |
| JLF30_RS24175 () | 26078..27175 | - | 1098 | Protein_29 | TonB-dependent receptor | - |
| JLF30_RS24180 () | 27232..28200 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| JLF30_RS24185 () | 28235..29110 | - | 876 | WP_032277257.1 | Beta-lactamase CTX-M-97 | ARG |
| JLF30_RS24190 () | 29360..29539 | - | 180 | Protein_32 | IS1380 family transposase | - |
| JLF30_RS24195 () | 29604..30308 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JLF30_RS24200 () | 30430..31335 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| JLF30_RS24205 () | 31332..32570 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| JLF30_RS24210 () | 32570..33154 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| JLF30_RS24215 () | 33647..34411 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| JLF30_RS24220 () | 34529..34594 | - | 66 | Protein_38 | EAL domain-containing protein | - |
| JLF30_RS24225 () | 34638..34943 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| JLF30_RS24230 () | 34954..36159 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| JLF30_RS24235 () | 36315..36518 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| JLF30_RS24240 () | 36646..37485 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| JLF30_RS24245 () | 37479..37826 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| JLF30_RS24250 () | 38032..38820 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| JLF30_RS24255 () | 38951..39424 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| JLF30_RS24260 () | 39714..40418 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| JLF30_RS24265 () | 40484..40927 | - | 444 | Protein_47 | IS91 family transposase ISAzo26 | Transposase |
| JLF30_RS24270 () | 40952..41656 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| JLF30_RS24275 () | 41706..41924 | - | 219 | Protein_49 | IS4 family transposase | - |
| JLF30_RS24280 () | 41939..42636 | - | 698 | Protein_50 | IS1 family transposase IS1X2 | Transposase |
| JLF30_RS24285 () | 43099..43257 | + | 159 | WP_000449408.1 | DsbA family protein | - |
| JLF30_RS24290 () | 43247..43753 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| JLF30_RS24295 () | 43936..44751 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| JLF30_RS24300 () | 45098..46984 | + | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| JLF30_RS24305 () | 47025..47552 | + | 528 | WP_000178050.1 | iron transporter | - |
| JLF30_RS24310 () | 47656..49035 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| JLF30_RS24315 () | 49038..50321 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| JLF30_RS24320 () | 50311..51441 | + | 1131 | WP_000729220.1 | ABC transporter permease | - |
| JLF30_RS24325 () | 51446..52141 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| JLF30_RS24330 () | 52128..52613 | + | 486 | WP_001267177.1 | TlpA family protein disulfide reductase | - |
| JLF30_RS24335 () | 52638..53123 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| JLF30_RS24340 () | 53245..53775 | + | 531 | Protein_62 | histidine-type phosphatase | - |
| JLF30_RS24345 () | 53833..54537 | - | 705 | WP_142435041.1 | IS6 family transposase IS26 | Transposase |
| JLF30_RS24350 () | 54562..55758 | + | 1197 | Protein_64 | IS3 family transposase | - |
| JLF30_RS24355 () | 55780..56013 | + | 234 | Protein_65 | Tn3 family transposase ISPsy39 | Transposase |
| JLF30_RS24360 () | 56090..56398 | + | 309 | Protein_66 | IS4 family transposase ISEc13 | Transposase |
| JLF30_RS24365 () | 56457..57767 | - | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| JLF30_RS24370 () | 57760..58833 | - | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| JLF30_RS24375 () | 58839..59663 | - | 825 | WP_000922702.1 | phosphodiesterase | - |
| JLF30_RS24380 () | 59674..60561 | - | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| JLF30_RS24385 () | 60551..61429 | - | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| JLF30_RS24390 () | 61560..62000 | - | 441 | Protein_72 | zinc-binding dehydrogenase | - |
| JLF30_RS24395 () | 62401..63291 | + | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| JLF30_RS24400 () | 63316..63696 | + | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| JLF30_RS24405 () | 63729..64694 | + | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| JLF30_RS24410 () | 64740..65492 | - | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| JLF30_RS24415 () | 66097..66381 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| JLF30_RS24420 () | 66381..66656 | + | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JLF30_RS24425 () | 66762..67055 | + | 294 | WP_001105060.1 | hypothetical protein | - |
| JLF30_RS24430 () | 67090..67218 | - | 129 | Protein_80 | IS481 family transposase | - |
| JLF30_RS24435 () | 67251..68420 | - | 1170 | WP_001072355.1 | hypothetical protein | - |
| JLF30_RS24440 () | 68913..69220 | + | 308 | Protein_82 | type II toxin-antitoxin system ParD family antitoxin | - |
| JLF30_RS24445 () | 69563..69745 | + | 183 | WP_042004909.1 | hypothetical protein | - |
| JLF30_RS24450 () | 69866..70606 | + | 741 | WP_001586233.1 | tyrosine-type recombinase/integrase | - |
| JLF30_RS24455 () | 70929..71918 | - | 990 | WP_123002471.1 | RepB family plasmid replication initiator protein | - |
| JLF30_RS24460 () | 72806..73075 | + | 270 | WP_001275013.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JLF30_RS24465 () | 73079..73609 | + | 531 | WP_000348883.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JLF30_RS24470 () | 73610..73827 | + | 218 | Protein_88 | transposase | - |
| JLF30_RS24475 () | 73832..74107 | - | 276 | WP_001403920.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JLF30_RS24480 () | 74196..74426 | - | 231 | WP_001261274.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| JLF30_RS24485 () | 74625..76799 | - | 2175 | Protein_91 | histidinol-phosphatase | - |
| JLF30_RS24490 () | 76864..77619 | - | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| JLF30_RS24495 () | 77616..79115 | - | 1500 | WP_000174402.1 | IS21 family transposase ISEc10 | Transposase |
| JLF30_RS24500 () | 79210..79662 | - | 453 | Protein_94 | histidinol-phosphatase | - |
| JLF30_RS24505 () | 80053..80538 | + | 486 | WP_001403958.1 | hypothetical protein | - |
| JLF30_RS24510 () | 80567..81339 | + | 773 | Protein_96 | hypothetical protein | - |
| JLF30_RS24515 () | 81506..82639 | + | 1134 | WP_000545985.1 | DUF3800 domain-containing protein | - |
| JLF30_RS24520 () | 82673..83185 | - | 513 | WP_001586228.1 | hypothetical protein | - |
| JLF30_RS24525 () | 83472..85037 | + | 1566 | WP_001586226.1 | ATP-binding protein | - |
| JLF30_RS24530 () | 85094..85963 | - | 870 | WP_001586225.1 | hypothetical protein | - |
| JLF30_RS24535 () | 85965..86867 | - | 903 | WP_024187432.1 | hypothetical protein | - |
| JLF30_RS24540 () | 86868..87053 | - | 186 | WP_001586223.1 | hypothetical protein | - |
| JLF30_RS24545 () | 87346..88278 | - | 933 | WP_000991831.1 | hypothetical protein | - |
| JLF30_RS24550 () | 88282..89277 | - | 996 | WP_000246635.1 | hypothetical protein | - |
| JLF30_RS24555 () | 89985..90203 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| JLF30_RS24560 () | 90205..90510 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | - |
| JLF30_RS24565 () | 90511..91317 | + | 807 | WP_000016982.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|