MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 119128 bp
Accession: NZ_AP022362 Location: 86670..205797 Organism: Escherichia coli strain E302 Replicon: chromosome
Accession: NZ_AP022362 Location: 86670..205797 Organism: Escherichia coli strain E302 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6M96_RS00410 () | 82688..83818 | + | 1131 | WP_000729220.1 | ABC transporter permease | - |
| G6M96_RS00415 () | 83823..84518 | + | 696 | WP_000117262.1 | ABC transporter ATP-binding protein | - |
| G6M96_RS00420 () | 84505..84990 | + | 486 | WP_001267177.1 | TlpA family protein disulfide reductase | - |
| G6M96_RS00425 () | 85015..85500 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| G6M96_RS00430 () | 85622..86152 | + | 531 | Protein_85 | histidine-type phosphatase | - |
| G6M96_RS00435 () | 86210..86914 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| G6M96_RS00440 () | 86939..88135 | + | 1197 | Protein_87 | IS3 family transposase | - |
| G6M96_RS00445 () | 88157..88390 | + | 234 | Protein_88 | Tn3 family transposase ISPsy39 | Transposase |
| G6M96_RS00450 () | 88467..88775 | + | 309 | Protein_89 | IS4 family transposase ISEc13 | Transposase |
| G6M96_RS00455 () | 88834..90144 | - | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| G6M96_RS00460 () | 90137..91210 | - | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| G6M96_RS00465 () | 91216..92040 | - | 825 | WP_000922702.1 | phosphodiesterase | - |
| G6M96_RS00470 () | 92051..92938 | - | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| G6M96_RS00475 () | 92928..93806 | - | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| G6M96_RS00480 () | 93937..94377 | - | 441 | Protein_95 | zinc-binding dehydrogenase | - |
| G6M96_RS00485 () | 94778..95668 | + | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| G6M96_RS00490 () | 95693..96073 | + | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| G6M96_RS00495 () | 96106..97071 | + | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| G6M96_RS00500 () | 97117..97869 | - | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| G6M96_RS00505 () | 98474..98758 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| G6M96_RS00510 () | 98758..99033 | + | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G6M96_RS00515 () | 99139..99432 | + | 294 | WP_001105060.1 | hypothetical protein | - |
| G6M96_RS00520 () | 99467..99595 | - | 129 | Protein_103 | IS481 family transposase | - |
| G6M96_RS00525 () | 99628..100797 | - | 1170 | WP_001072355.1 | hypothetical protein | - |
| G6M96_RS00530 () | 101290..101597 | + | 308 | Protein_105 | type II toxin-antitoxin system ParD family antitoxin | - |
| G6M96_RS00535 () | 101940..102122 | + | 183 | WP_042344623.1 | hypothetical protein | - |
| G6M96_RS00540 () | 102243..102983 | + | 741 | WP_001066953.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| G6M96_RS00545 () | 103268..104245 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| G6M96_RS00550 () | 104991..105314 | + | 324 | Protein_109 | IS21 family transposase IS21 | Transposase |
| G6M96_RS25615 () | 105316..105420 | + | 105 | Protein_110 | AAA family ATPase | - |
| G6M96_RS00555 () | 105481..105874 | + | 394 | Protein_111 | protein ImpB | - |
| G6M96_RS00560 () | 106069..107608 | + | 1540 | Protein_112 | IS21 family transposase ISEc12 | Transposase |
| G6M96_RS00565 () | 107623..108369 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| G6M96_RS00570 () | 108456..108578 | + | 123 | Protein_114 | DUF4113 domain-containing protein | - |
| G6M96_RS00575 () | 108758..109455 | - | 698 | Protein_115 | IS1 family transposase IS1A | Transposase |
| G6M96_RS00580 () | 109835..112036 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| G6M96_RS00585 () | 112118..113395 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| G6M96_RS00590 () | 113392..115136 | - | 1745 | Protein_118 | Aerobactin synthase | VF |
| G6M96_RS00595 () | 115136..116083 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| G6M96_RS00600 () | 116084..117808 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| G6M96_RS00605 () | 117944..119137 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| G6M96_RS00610 () | 119517..119897 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| G6M96_RS00615 () | 120238..120651 | - | 414 | Protein_123 | phosphopyruvate hydratase | - |
| G6M96_RS00620 () | 120649..120906 | + | 258 | Protein_124 | Tn3 family transposase | - |
| G6M96_RS00625 () | 121140..121997 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| G6M96_RS00630 () | 121994..122851 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| G6M96_RS00635 () | 122848..123675 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| G6M96_RS00640 () | 123675..124589 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| G6M96_RS00645 () | 124945..125642 | + | 698 | Protein_129 | IS1 family transposase IS1A | Transposase |
| G6M96_RS00650 () | 125896..126918 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| G6M96_RS00655 () | 126903..128468 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| G6M96_RS00660 () | 128543..128959 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| G6M96_RS00665 () | 128956..129186 | - | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| G6M96_RS00670 () | 129567..133361 | + | 3795 | WP_001144732.1 | hypothetical protein | - |
| G6M96_RS00675 () | 133406..133822 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| G6M96_RS00680 () | 133819..134049 | - | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| G6M96_RS00685 () | 134314..134814 | + | 501 | WP_000528932.1 | hypothetical protein | - |
| G6M96_RS00690 () | 134827..135600 | + | 774 | WP_000905949.1 | hypothetical protein | - |
| G6M96_RS00695 () | 135811..137424 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| G6M96_RS00700 () | 137453..137800 | - | 348 | WP_047626551.1 | IS66 family transposase ISEc23 | Transposase |
| G6M96_RS00705 () | 137797..138222 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| G6M96_RS00710 () | 138284..139435 | + | 1152 | WP_031325939.1 | DUF3800 domain-containing protein | - |
| G6M96_RS00715 () | 139469..139981 | - | 513 | WP_000151784.1 | hypothetical protein | - |
| G6M96_RS00720 () | 140527..140745 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| G6M96_RS00725 () | 140747..141052 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| G6M96_RS00730 () | 141053..141859 | + | 807 | WP_000016982.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| G6M96_RS00735 () | 142633..143385 | + | 753 | WP_163409461.1 | replication initiation protein RepE | - |
| G6M96_RS00740 () | 143973..145139 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| G6M96_RS00745 () | 145139..146110 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| G6M96_RS00750 () | 146977..147879 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| G6M96_RS00755 () | 147883..148187 | + | 305 | Protein_151 | hypothetical protein | - |
| G6M96_RS00760 () | 148264..148947 | + | 684 | WP_000086185.1 | DNA methylase | - |
| G6M96_RS00765 () | 148948..149169 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| G6M96_RS00770 () | 149183..149617 | + | 435 | WP_000274437.1 | DUF1380 family protein | - |
| G6M96_RS00775 () | 149668..150444 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| G6M96_RS00785 () | 150984..151286 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| G6M96_RS00790 () | 151333..151755 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| G6M96_RS00795 () | 151752..151943 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| G6M96_RS00800 () | 152978..153208 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| G6M96_RS00805 () | 153260..154621 | + | 1362 | WP_000170728.1 | DUF3560 domain-containing protein | - |
| G6M96_RS00810 () | 154668..155231 | + | 564 | WP_012783964.1 | class I SAM-dependent methyltransferase | - |
| G6M96_RS00820 () | 156094..156381 | + | 288 | WP_000107537.1 | hypothetical protein | - |
| G6M96_RS00825 () | 156502..157323 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| G6M96_RS00830 () | 157620..158267 | - | 648 | WP_000614282.1 | hypothetical protein | VF |
| G6M96_RS00835 () | 158553..158936 | + | 384 | WP_001151564.1 | relaxosome protein TraM | - |
| G6M96_RS00840 () | 159130..159816 | + | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| G6M96_RS00845 () | 159910..160137 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| G6M96_RS00850 () | 160171..160533 | + | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| G6M96_RS00855 () | 160538..160849 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| G6M96_RS00860 () | 160871..161437 | + | 567 | WP_000399804.1 | type IV conjugative transfer system protein TraE | - |
| G6M96_RS00865 () | 161448..162152 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| G6M96_RS00870 () | 162152..163579 | + | 1428 | WP_000146638.1 | conjugal transfer protein TraB | - |
| G6M96_RS00875 () | 163569..164153 | + | 585 | WP_000002795.1 | conjugal transfer protein TraP | - |
| G6M96_RS00880 () | 164107..164460 | + | 354 | WP_071528018.1 | conjugal transfer protein TrbD | - |
| G6M96_RS00885 () | 164453..164704 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| G6M96_RS00890 () | 164701..165216 | + | 516 | WP_000809893.1 | type IV conjugative transfer system lipoprotein TraV | - |
| G6M96_RS00895 () | 165351..165572 | + | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| G6M96_RS00900 () | 165732..168359 | + | 2628 | WP_001064239.1 | type IV secretion system protein TraC | - |
| G6M96_RS00905 () | 168356..168742 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| G6M96_RS00910 () | 168739..169371 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| G6M96_RS00915 () | 169368..170360 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| G6M96_RS00920 () | 170390..170695 | + | 306 | WP_000224411.1 | hypothetical protein | - |
| G6M96_RS00925 () | 170704..171342 | + | 639 | WP_001080257.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| G6M96_RS00930 () | 171339..173147 | + | 1809 | WP_000821863.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| G6M96_RS00935 () | 173174..173431 | + | 258 | WP_000864320.1 | conjugal transfer protein TrbE | - |
| G6M96_RS00940 () | 173424..174167 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| G6M96_RS00945 () | 174183..174521 | + | 339 | WP_001287905.1 | conjugal transfer protein TrbA | - |
| G6M96_RS00950 () | 174648..174932 | + | 285 | WP_001448202.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| G6M96_RS00955 () | 174919..175464 | + | 546 | WP_000059824.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| G6M96_RS00960 () | 175394..175735 | + | 342 | WP_001448115.1 | P-type conjugative transfer protein TrbJ | - |
| G6M96_RS00965 () | 175683..176108 | + | 426 | WP_001448114.1 | F-type conjugal transfer protein TrbF | - |
| G6M96_RS00970 () | 176095..177468 | + | 1374 | WP_001137364.1 | conjugal transfer protein TraH | - |
| G6M96_RS00975 () | 177465..180284 | + | 2820 | WP_001007057.1 | conjugal transfer mating pair stabilization protein TraG | - |
| G6M96_RS00980 () | 180303..180800 | + | 498 | WP_000605861.1 | hypothetical protein | - |
| G6M96_RS00985 () | 180832..181563 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| G6M96_RS00990 () | 181816..184014 | + | 2199 | WP_000009360.1 | type IV conjugative transfer system coupling protein TraD | - |
| G6M96_RS00995 () | 184014..189284 | + | 5271 | WP_000986934.1 | conjugative transfer relaxase/helicase TraI | - |
| G6M96_RS01000 () | 189304..190050 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| G6M96_RS01005 () | 190109..190969 | + | 861 | WP_000704528.1 | putative protein YcjY | VF |
| G6M96_RS01010 () | 191072..191632 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| G6M96_RS01015 () | 191761..191973 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| G6M96_RS01020 () | 192218..192679 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| G6M96_RS01025 () | 192725..192934 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| G6M96_RS01030 () | 192972..193562 | + | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| G6M96_RS01035 () | 193802..193903 | + | 102 | Protein_205 | replication protein | - |
| G6M96_RS01040 () | 193920..194617 | - | 698 | Protein_206 | IS1 family transposase IS1R | Transposase |
| G6M96_RS01045 () | 194866..195267 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| G6M96_RS01050 () | 195200..195457 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| G6M96_RS01055 () | 195550..196203 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| G6M96_RS01060 () | 196302..198197 | - | 1896 | Protein_210 | Tn3 family transposase TnpA_Tn3 | Transposase |
| G6M96_RS01065 () | 198250..198954 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| G6M96_RS01070 () | 199325..199786 | + | 462 | WP_000978817.1 | thermonuclease family protein | - |
| G6M96_RS01075 () | 200079..201152 | - | 1074 | Protein_213 | Methyl-accepting chemotaxis protein McpQ | VF |
| G6M96_RS01080 () | 201216..201920 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| G6M96_RS01085 () | 202042..202947 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| G6M96_RS01090 () | 202944..204182 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| G6M96_RS01095 () | 204182..204766 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| G6M96_RS01100 () | 205259..206023 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| G6M96_RS01105 () | 206141..206206 | - | 66 | Protein_219 | EAL domain-containing protein | - |
| G6M96_RS01110 () | 206250..206555 | - | 306 | WP_000130000.1 | PadR family transcriptional regulator | - |
| G6M96_RS01115 () | 206566..207771 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| G6M96_RS01120 () | 207927..208130 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| G6M96_RS01125 () | 208258..209097 | - | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| G6M96_RS01130 () | 209091..209438 | - | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| G6M96_RS01135 () | 209644..210432 | - | 789 | WP_000503573.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|