MGE detailed information
MGE type: Genomic_island MGE length: 46919 bp
Accession: NZ_AP021879 Location: 937866..984784 Organism: Desulfosarcina ovata subsp. ovata strain oXyS1 Replicon: chromosome
Accession: NZ_AP021879 Location: 937866..984784 Organism: Desulfosarcina ovata subsp. ovata strain oXyS1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GN112_RS04105 () | 933255..934235 | - | 981 | WP_162458776.1 | ISAzo13 family transposase | - |
| GN112_RS04110 () | 934256..934993 | - | 738 | WP_155309062.1 | hypothetical protein | - |
| GN112_RS04115 () | 935220..935447 | - | 228 | WP_155309063.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| GN112_RS04120 () | 935698..936924 | - | 1227 | WP_155309064.1 | protein GlmU | - |
| GN112_RS04125 () | 936947..937396 | - | 450 | WP_197743253.1 | hypothetical protein | - |
| GN112_RS04130 () | 937393..937677 | - | 285 | WP_155309065.1 | nucleotidyltransferase domain-containing protein | - |
| GN112_RS04135 () | 937866..939740 | - | 1875 | WP_155309066.1 | GDP-L-fucose synthase | VF |
| GN112_RS04140 () | 939755..940765 | - | 1011 | WP_155309067.1 | glycosyltransferase family 4 protein | - |
| GN112_RS04145 () | 940778..941746 | - | 969 | WP_155309068.1 | NAD-dependent epimerase/dehydratase family protein | - |
| GN112_RS04150 () | 941757..943004 | - | 1248 | WP_155309069.1 | glycosyltransferase family 4 protein | - |
| GN112_RS04155 () | 942992..944110 | - | 1119 | WP_197743254.1 | UDP-N-acetylglucosamine 2-epimerase | VF |
| GN112_RS04160 () | 944107..945237 | - | 1131 | WP_155309070.1 | hypothetical protein | VF |
| GN112_RS04165 () | 945269..946291 | - | 1023 | WP_155309071.1 | hypothetical protein | VF |
| GN112_RS04170 () | 946392..947555 | - | 1164 | WP_155309072.1 | glycosyltransferase family 4 protein | - |
| GN112_RS04175 () | 948003..948803 | - | 801 | WP_155309073.1 | sulfotransferase domain-containing protein | - |
| GN112_RS04180 () | 949044..949940 | - | 897 | WP_162458777.1 | glycosyltransferase | - |
| GN112_RS04185 () | 950271..951218 | + | 948 | WP_155309075.1 | IS66 family transposase ISCku7 | Transposase |
| GN112_RS04190 () | 951373..951861 | + | 489 | WP_155309076.1 | IS630 family transposase ISA1083-2 | Transposase |
| GN112_RS04195 () | 951855..953120 | - | 1266 | WP_155308364.1 | IS4 family transposase ISGur4 | Transposase |
| GN112_RS04200 () | 953241..953834 | + | 594 | WP_162458778.1 | IS630 family transposase ISVsp12 | Transposase |
| GN112_RS04205 () | 953876..954352 | + | 477 | WP_162458779.1 | IS66 family transposase ISCku7 | Transposase |
| GN112_RS04210 () | 954521..955441 | - | 921 | WP_155309079.1 | O-antigen ligase family protein | - |
| GN112_RS04215 () | 955962..956924 | - | 963 | WP_155309080.1 | sulfotransferase | - |
| GN112_RS33530 () | 956936..957538 | - | 603 | WP_197743255.1 | acyltransferase | - |
| GN112_RS04225 () | 957541..958962 | - | 1422 | WP_155309081.1 | flippase | - |
| GN112_RS04230 () | 958966..959955 | - | 990 | WP_155309082.1 | GDP-L-fucose synthase | VF |
| GN112_RS04235 () | 959949..961133 | - | 1185 | WP_155309083.1 | hypothetical protein | VF |
| GN112_RS04240 () | 961188..962336 | - | 1149 | WP_155309084.1 | GDP-L-fucose synthase | VF |
| GN112_RS04245 () | 962426..964588 | - | 2163 | WP_155309085.1 | IS701 family transposase ISRba4 | Transposase |
| GN112_RS04250 () | 964729..965160 | - | 432 | WP_155309086.1 | IS200-IS605 family transposase IS1004 | Transposase |
| GN112_RS04255 () | 965360..966775 | - | 1416 | WP_155309087.1 | hypothetical protein | - |
| GN112_RS04260 () | 966795..967046 | - | 252 | WP_155309088.1 | sugar nucleotide-binding protein | - |
| GN112_RS04265 () | 967060..967308 | + | 249 | WP_155309089.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| GN112_RS04270 () | 967309..967767 | + | 459 | WP_155309090.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| GN112_RS04275 () | 967665..968528 | - | 864 | WP_155309091.1 | hypothetical protein | VF |
| GN112_RS04280 () | 969294..970421 | - | 1128 | WP_155309092.1 | putative DNA binding domain-containing protein | - |
| GN112_RS04285 () | 970694..971119 | - | 426 | WP_155309093.1 | nucleotidyltransferase domain-containing protein | - |
| GN112_RS04290 () | 971131..971550 | - | 420 | WP_155309094.1 | DUF86 domain-containing protein | - |
| GN112_RS04295 () | 971547..971969 | - | 423 | WP_155309095.1 | hypothetical protein | - |
| GN112_RS04300 () | 972136..972435 | - | 300 | WP_155309096.1 | DUF86 domain-containing protein | - |
| GN112_RS04305 () | 972645..973145 | - | 501 | WP_155309097.1 | GNAT family N-acetyltransferase | - |
| GN112_RS04310 () | 973142..973429 | - | 288 | WP_155309098.1 | DUF1778 domain-containing protein | - |
| GN112_RS04315 () | 973544..973960 | - | 417 | WP_155309099.1 | DUF86 domain-containing protein | Toxin Detail |
| GN112_RS04320 () | 973950..974375 | - | 426 | WP_155309100.1 | nucleotidyltransferase domain-containing protein | Antitoxin Detail |
| GN112_RS04325 () | 974524..974829 | - | 306 | WP_155314130.1 | nucleotidyltransferase domain-containing protein | - |
| GN112_RS04330 () | 974835..975272 | - | 438 | WP_155309101.1 | nucleotidyltransferase substrate binding protein | - |
| GN112_RS04335 () | 975269..975556 | - | 288 | WP_155309102.1 | hypothetical protein | - |
| GN112_RS04340 () | 975851..976717 | - | 867 | WP_155309103.1 | GDP-mannose 4,6-dehydratase | VF |
| GN112_RS04345 () | 976933..977181 | + | 249 | WP_155309104.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| GN112_RS04350 () | 977182..977517 | + | 336 | WP_155309105.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| GN112_RS04355 () | 977629..978189 | - | 561 | WP_155309106.1 | hypothetical protein | VF |
| GN112_RS04360 () | 978203..978601 | - | 399 | WP_155309107.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GN112_RS04365 () | 978631..978861 | - | 231 | WP_155309108.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GN112_RS04370 () | 978938..979819 | - | 882 | WP_155309109.1 | Bifunctional protein GlmU | VF |
| GN112_RS04375 () | 979816..980895 | - | 1080 | WP_155309110.1 | GDP-L-fucose synthase | VF |
| GN112_RS04380 () | 980935..981516 | - | 582 | WP_155309111.1 | winged helix-turn-helix transcriptional regulator | - |
| GN112_RS04385 () | 981791..982075 | - | 285 | WP_155309112.1 | helix-hairpin-helix domain-containing protein | - |
| GN112_RS04390 () | 982455..983810 | + | 1356 | WP_155309113.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| GN112_RS04395 () | 983858..984307 | + | 450 | WP_155309114.1 | response regulator | - |
| GN112_RS04400 () | 984320..984784 | - | 465 | WP_155309115.1 | hypothetical protein | - |
| GN112_RS04405 () | 985427..987319 | + | 1893 | WP_155309116.1 | DNA topoisomerase IV subunit B | - |
| GN112_RS04410 () | 987479..989782 | + | 2304 | WP_155309117.1 | DNA topoisomerase IV subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|