MGE detailed information
MGE type: Prophage MGE length: 44273 bp
Accession: NZ_AP017922 Location: 1431246..1475518 Organism: Staphylococcus aureus strain JP02758 Replicon: chromosome
Accession: NZ_AP017922 Location: 1431246..1475518 Organism: Staphylococcus aureus strain JP02758 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JP49775_RS06855 () | 1430443..1430622 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| JP49775_RS06865 () | 1430933..1431193 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| JP49775_RS06870 () | 1431246..1431596 | - | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| JP49775_RS06875 () | 1432279..1432728 | + | 450 | WP_000727643.1 | Chemotaxis inhibitory protein | VF |
| JP49775_RS06880 () | 1432823..1433158 | - | 336 | Protein_1319 | SH3 domain-containing protein | - |
| JP49775_RS06890 () | 1433808..1434299 | - | 492 | WP_000920037.1 | Staphylokinase | VF |
| JP49775_RS06895 () | 1434490..1435245 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| JP49775_RS06900 () | 1435257..1435511 | - | 255 | WP_000611512.1 | phage holin | - |
| JP49775_RS06905 () | 1435563..1435670 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 1435592..1435731 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1435592..1435731 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1435592..1435731 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1435592..1435731 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1435600..1435655 | + | 56 | - | - | Antitoxin Detail |
| JP49775_RS06910 () | 1435723..1435899 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| JP49775_RS06915 () | 1436049..1436345 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| JP49775_RS06920 () | 1436403..1436690 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| JP49775_RS06925 () | 1436737..1436889 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| JP49775_RS06930 () | 1436879..1440664 | - | 3786 | WP_149036335.1 | hypothetical protein | - |
| JP49775_RS06935 () | 1440680..1442170 | - | 1491 | WP_029549971.1 | phage tail family protein | - |
| JP49775_RS06940 () | 1442170..1446822 | - | 4653 | WP_149036336.1 | phage tail tape measure protein | - |
| JP49775_RS06945 () | 1446878..1447000 | - | 123 | WP_000570353.1 | hypothetical protein | - |
| JP49775_RS06950 () | 1447060..1447506 | - | 447 | WP_000442601.1 | hypothetical protein | - |
| JP49775_RS06955 () | 1447571..1448524 | - | 954 | WP_149036337.1 | Ig-like domain-containing protein | - |
| JP49775_RS06960 () | 1448525..1448905 | - | 381 | WP_000611452.1 | hypothetical protein | - |
| JP49775_RS06965 () | 1448902..1449279 | - | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| JP49775_RS06970 () | 1449279..1449614 | - | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| JP49775_RS06975 () | 1449601..1449933 | - | 333 | WP_001177486.1 | head-tail connector protein | - |
| JP49775_RS06980 () | 1449942..1450100 | - | 159 | WP_001252099.1 | hypothetical protein | - |
| JP49775_RS06985 () | 1450136..1451384 | - | 1249 | Protein_1339 | phage major capsid protein | - |
| JP49775_RS06990 () | 1451472..1452056 | - | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| JP49775_RS06995 () | 1452049..1453299 | - | 1251 | WP_000511067.1 | phage portal protein | - |
| JP49775_RS07000 () | 1453305..1453505 | - | 201 | WP_000365300.1 | hypothetical protein | - |
| JP49775_RS07005 () | 1453519..1455213 | - | 1695 | WP_000133304.1 | phage terminase large subunit | - |
| JP49775_RS07010 () | 1455216..1455683 | - | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| JP49775_RS07015 () | 1455813..1456157 | - | 345 | WP_000817289.1 | HNH endonuclease | - |
| JP49775_RS07020 () | 1456173..1456625 | - | 453 | WP_000406194.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| JP49775_RS07025 () | 1456740..1457210 | - | 471 | WP_000282748.1 | hypothetical protein | - |
| JP49775_RS07035 () | 1457233..1457433 | - | 201 | WP_001794311.1 | DUF1514 family protein | - |
| JP49775_RS07040 () | 1457433..1457582 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| JP49775_RS07045 () | 1457579..1457785 | - | 207 | WP_000195759.1 | DUF1381 domain-containing protein | - |
| JP49775_RS07050 () | 1457802..1457975 | - | 174 | WP_001209216.1 | hypothetical protein | - |
| JP49775_RS07055 () | 1458012..1458548 | - | 537 | WP_001066448.1 | dUTP diphosphatase | - |
| JP49775_RS07060 () | 1458541..1458711 | - | 171 | WP_000714407.1 | hypothetical protein | - |
| JP49775_RS07065 () | 1458698..1458952 | - | 255 | WP_001065078.1 | DUF1024 family protein | - |
| JP49775_RS07070 () | 1458945..1459334 | - | 390 | WP_000219085.1 | acetyltransferase | - |
| JP49775_RS07075 () | 1459331..1459678 | - | 348 | WP_000982695.1 | hypothetical protein | - |
| JP49775_RS07080 () | 1459742..1459990 | - | 249 | WP_001126839.1 | phi PVL orf 51-like protein | - |
| JP49775_RS07085 () | 1459991..1460362 | - | 372 | WP_001029545.1 | hypothetical protein | - |
| JP49775_RS07090 () | 1460363..1460548 | - | 186 | WP_001187234.1 | DUF3113 family protein | - |
| JP49775_RS07095 () | 1460553..1460957 | - | 405 | WP_000049804.1 | DUF1064 domain-containing protein | - |
| JP49775_RS07100 () | 1460968..1461189 | - | 222 | WP_001123674.1 | DUF3269 family protein | - |
| JP49775_RS07105 () | 1461202..1461360 | - | 159 | WP_000256589.1 | hypothetical protein | - |
| JP49775_RS07110 () | 1461354..1462133 | - | 780 | WP_000803062.1 | ATP-binding protein | - |
| JP49775_RS07115 () | 1462143..1462913 | - | 771 | WP_000190253.1 | conserved phage C-terminal domain-containing protein | - |
| JP49775_RS07120 () | 1462979..1463260 | + | 282 | WP_000414755.1 | hypothetical protein | - |
| JP49775_RS13930 () | 1463253..1463402 | - | 150 | WP_001081076.1 | hypothetical protein | - |
| JP49775_RS07125 () | 1463399..1464070 | - | 672 | WP_001199416.1 | hypothetical protein | - |
| JP49775_RS07130 () | 1464083..1464634 | - | 552 | WP_000704705.1 | single-stranded DNA-binding protein | - |
| JP49775_RS07135 () | 1464665..1465444 | - | 780 | WP_000137070.1 | ATP-binding protein | - |
| JP49775_RS07140 () | 1465437..1465658 | - | 222 | WP_000815404.1 | DUF2483 domain-containing protein | - |
| JP49775_RS07145 () | 1465668..1465928 | - | 261 | WP_000291488.1 | hypothetical protein ; Integrase | Integrase |
| JP49775_RS07150 () | 1466021..1466182 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| JP49775_RS07155 () | 1466179..1466499 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| JP49775_RS07160 () | 1466558..1467190 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| JP49775_RS07165 () | 1467205..1467345 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| JP49775_RS07170 () | 1467376..1467573 | - | 198 | WP_001148855.1 | hypothetical protein | - |
| JP49775_RS07175 () | 1467589..1468338 | - | 750 | WP_001148337.1 | phage antirepressor KilAC domain-containing protein | - |
| JP49775_RS07180 () | 1468395..1468934 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| JP49775_RS07185 () | 1468958..1469218 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| JP49775_RS07190 () | 1469236..1469460 | - | 225 | WP_000338186.1 | DUF739 family protein | - |
| JP49775_RS07195 () | 1469619..1470389 | + | 771 | WP_001208482.1 | helix-turn-helix domain-containing protein | - |
| JP49775_RS07200 () | 1470589..1470771 | + | 183 | WP_000705243.1 | hypothetical protein | - |
| JP49775_RS07205 () | 1470807..1470953 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| JP49775_RS07210 () | 1470950..1471564 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| JP49775_RS07215 () | 1471672..1472709 | + | 1038 | WP_000857176.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JP49775_RS07220 () | 1472771..1475518 | - | 2748 | Protein_1386 | hyperosmolarity resistance protein Ebh | - |
| JP49775_RS07225 () | 1475919..1477310 | - | 1392 | WP_029549681.1 | multidrug efflux MFS transporter NorB | - |
| JP49775_RS07230 () | 1477457..1478791 | - | 1335 | WP_029549680.1 | amino acid permease | - |
| JP49775_RS07235 () | 1478822..1479862 | - | 1041 | WP_000210828.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus NCTC 8325 | Prophage | TA21487 | NC_007795 | 2033113..2088736 | 0.009 | |
| Staphylococcus aureus strain HG003 isolate RN1 Scaffold_5 | Prophage | TA10146 | NZ_JPPU01000005 | 180..39322 | 0.004 |