MGE detailed information
MGE type: Conjugative plasmid MGE length: 168972 bp
Accession: NZ_AP017611 Location: 1..168972 Organism: Escherichia coli strain 20Ec-P-124 Replicon: plasmid pMRY16-002_1
Accession: NZ_AP017611 Location: 1..168972 Organism: Escherichia coli strain 20Ec-P-124 Replicon: plasmid pMRY16-002_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ02_RS25435 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| CPZ02_RS25440 () | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| CPZ02_RS25445 () | 2124..2312 | - | 189 | WP_014640565.1 | hypothetical protein | - |
| CPZ02_RS25450 () | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| CPZ02_RS25455 () | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| CPZ02_RS25465 () | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| CPZ02_RS25480 () | 7425..7583 | - | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| CPZ02_RS25485 () | 7767..8980 | + | 1214 | WP_172424395.1 | IS3 family transposase IS629 | Transposase |
| CPZ02_RS25490 () | 9128..9453 | - | 326 | Protein_8 | DDE-type integrase/transposase/recombinase | - |
| CPZ02_RS25500 () | 9619..10316 | + | 698 | Protein_9 | IS1 family transposase IS1G | Transposase |
| CPZ02_RS25505 () | 10394..11783 | - | 1390 | Protein_10 | ISNCY family transposase ISKpn21 | Transposase |
| CPZ02_RS25510 () | 12093..12242 | - | 150 | Protein_11 | IS3 family transposase IS2 | Transposase |
| CPZ02_RS25515 () | 12420..13613 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| CPZ02_RS25525 () | 14836..16072 | - | 1237 | Protein_13 | IS3 family transposase IS2 | Transposase |
| CPZ02_RS25540 () | 16699..16992 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| CPZ02_RS25545 () | 17050..17249 | - | 200 | Protein_15 | lysis protein | - |
| CPZ02_RS25555 () | 17803..18904 | + | 1102 | Protein_16 | IS481 family transposase ISKpn28 | Transposase |
| CPZ02_RS25565 () | 20140..21255 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| CPZ02_RS25570 () | 21395..25054 | + | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
| CPZ02_RS25575 () | 25158..26387 | + | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
| CPZ02_RS25580 () | 26472..27428 | + | 957 | WP_000271276.1 | Ferri-bacillibactin esterase BesA | VF |
| CPZ02_RS25585 () | 27473..29650 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| CPZ02_RS25600 () | 30505..31539 | - | 1035 | WP_096488198.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| CPZ02_RS25610 () | 32098..32444 | - | 347 | Protein_23 | hypothetical protein | - |
| CPZ02_RS25620 () | 32746..33228 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| CPZ02_RS25625 () | 33345..34033 | - | 689 | Protein_25 | 3'-5' exonuclease | - |
| CPZ02_RS25630 () | 34194..34418 | - | 225 | WP_050439874.1 | hypothetical protein | - |
| CPZ02_RS25635 () | 34718..35107 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| CPZ02_RS25640 () | 35151..37358 | - | 2208 | WP_016242784.1 | Catalase-peroxidase | VF |
| CPZ02_RS25650 () | 38330..38917 | - | 588 | WP_024241464.1 | hypothetical protein | VF |
| CPZ02_RS25655 () | 39087..39728 | + | 642 | WP_096488200.1 | hypothetical protein | VF |
| CPZ02_RS25660 () | 39866..40558 | - | 693 | Protein_32 | Serine protease EspC | VF |
| CPZ02_RS25665 () | 40645..41070 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| CPZ02_RS25670 () | 41067..41417 | + | 351 | WP_074514505.1 | IS66 family transposase ISEc23 | Transposase |
| CPZ02_RS25675 () | 41517..42473 | + | 957 | Protein_35 | IS66 family transposase ISEc23 | Transposase |
| CPZ02_RS25680 () | 42820..46911 | - | 4092 | WP_071594104.1 | Serine protease SepA autotransporter | VF |
| CPZ02_RS25685 () | 47107..47709 | - | 603 | Protein_37 | IS3 family transposase IS2 | Transposase |
| CPZ02_RS25690 () | 47791..48156 | + | 366 | WP_000124086.1 | hypothetical protein | - |
| CPZ02_RS25695 () | 48156..49333 | + | 1178 | Protein_39 | IS91 family transposase ISEc37 | Transposase |
| CPZ02_RS25705 () | 49722..49937 | - | 216 | WP_001180116.1 | hypothetical protein | - |
| CPZ02_RS25710 () | 49927..50172 | - | 246 | WP_000356546.1 | hypothetical protein | - |
| CPZ02_RS25715 () | 50217..50540 | - | 324 | WP_001181903.1 | hypothetical protein | - |
| CPZ02_RS25720 () | 50686..50967 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CPZ02_RS25725 () | 50957..51208 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| CPZ02_RS25735 () | 52261..53115 | + | 855 | WP_001239324.1 | replication initiation protein | - |
| CPZ02_RS25740 () | 53140..53586 | + | 447 | WP_021532249.1 | hypothetical protein | - |
| CPZ02_RS25745 () | 53654..54079 | + | 426 | WP_182585739.1 | DNA distortion polypeptide 3 | - |
| CPZ02_RS29165 () | 54131..54364 | - | 234 | WP_024252801.1 | YcxB family protein | - |
| CPZ02_RS29170 () | 54542..54727 | - | 186 | Protein_49 | YcxB family protein | - |
| CPZ02_RS25760 () | 55162..55446 | - | 285 | WP_001185480.1 | hypothetical protein | - |
| CPZ02_RS25765 () | 55546..56208 | - | 663 | WP_000516402.1 | peptidyl-arginine deiminase | - |
| CPZ02_RS25770 () | 56589..57233 | + | 645 | WP_096488201.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CPZ02_RS25775 () | 57558..59300 | - | 1743 | WP_096488202.1 | ATP-binding cassette domain-containing protein | - |
| CPZ02_RS25780 () | 59303..60844 | - | 1542 | WP_096488203.1 | lasso peptide isopeptide bond-forming cyclase | - |
| CPZ02_RS25785 () | 60847..61473 | - | 627 | WP_096488223.1 | lasso peptide biosynthesis B2 protein | - |
| CPZ02_RS25790 () | 61813..61989 | + | 177 | WP_096488204.1 | lasso peptide microcin J25 | - |
| CPZ02_RS25805 () | 64031..64396 | + | 366 | WP_000124086.1 | hypothetical protein | - |
| CPZ02_RS25810 () | 64396..65573 | + | 1178 | Protein_58 | IS91 family transposase ISEc37 | Transposase |
| CPZ02_RS25815 () | 65762..66088 | - | 327 | Protein_59 | IS21 family transposase IS21 | Transposase |
| CPZ02_RS25825 () | 69025..69444 | + | 420 | WP_000650705.1 | polymer-forming cytoskeletal protein | - |
| CPZ02_RS25835 () | 70130..70750 | - | 621 | WP_071829867.1 | Serine protease EspP | VF |
| CPZ02_RS25845 () | 70805..71062 | + | 258 | Protein_63 | IS3 family transposase IS911 | Transposase |
| CPZ02_RS25855 () | 72496..73617 | + | 1122 | WP_112936990.1 | IS30 family transposase IS30D | Transposase |
| CPZ02_RS25860 () | 73627..74532 | + | 906 | Protein_66 | IS3 family transposase ISEc31 | Transposase |
| CPZ02_RS25865 () | 74759..82569 | - | 7811 | Protein_67 | hypothetical protein | VF |
| CPZ02_RS25875 () | 83133..83498 | + | 366 | WP_000124086.1 | hypothetical protein | - |
| CPZ02_RS25880 () | 83498..84675 | + | 1178 | Protein_69 | IS91 family transposase ISEc37 | Transposase |
| CPZ02_RS25890 () | 84868..85149 | - | 282 | WP_021533574.1 | hypothetical protein | - |
| CPZ02_RS25895 () | 85255..85530 | - | 276 | WP_001620845.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CPZ02_RS25900 () | 85530..85814 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| CPZ02_RS25905 () | 86082..86441 | + | 360 | Protein_73 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| CPZ02_RS25910 () | 86495..87199 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CPZ02_RS25915 () | 87266..88123 | - | 858 | WP_122997250.1 | incFII family plasmid replication initiator RepA | - |
| CPZ02_RS25920 () | 88116..88190 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CPZ02_RS25930 () | 88424..88681 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| CPZ02_RS25935 () | 88920..89510 | - | 591 | WP_060710373.1 | DUF2726 domain-containing protein | - |
| CPZ02_RS25940 () | 89548..89757 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| CPZ02_RS25945 () | 89803..90264 | - | 462 | WP_001233857.1 | thermonuclease family protein | - |
| CPZ02_RS25950 () | 90509..90721 | - | 213 | WP_001371875.1 | ANR family transcriptional regulator | - |
| CPZ02_RS25955 () | 90854..91414 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| CPZ02_RS25960 () | 91517..92377 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| CPZ02_RS25965 () | 92436..93182 | - | 747 | WP_000205766.1 | conjugal transfer pilus acetylase TraX | - |
| CPZ02_RS25970 () | 93202..98472 | - | 5271 | WP_096488212.1 | Multifunctional conjugation protein TraI | Relaxase |
| CPZ02_RS25975 () | 98472..100706 | - | 2235 | WP_096488213.1 | type IV conjugative transfer system coupling protein TraD | - |
| CPZ02_RS25980 () | 100959..101690 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| CPZ02_RS25985 () | 101715..102236 | - | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| CPZ02_RS25990 () | 102269..105085 | - | 2817 | WP_096488214.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CPZ02_RS25995 () | 105082..106455 | - | 1374 | WP_000944322.1 | conjugal transfer protein TraH | - |
| CPZ02_RS26000 () | 106455..106869 | - | 415 | Protein_91 | F-type conjugal transfer protein TrbF | - |
| CPZ02_RS26005 () | 106823..107164 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| CPZ02_RS26010 () | 107094..107639 | - | 546 | WP_000059850.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CPZ02_RS26015 () | 107626..107910 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CPZ02_RS26020 () | 107991..108305 | + | 315 | WP_000415567.1 | hypothetical protein | - |
| CPZ02_RS26025 () | 108307..108654 | - | 348 | WP_001287913.1 | conjugal transfer protein TrbA | - |
| CPZ02_RS26030 () | 108670..109413 | - | 744 | WP_001030367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CPZ02_RS26035 () | 109406..109663 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| CPZ02_RS26040 () | 109690..111498 | - | 1809 | WP_000821847.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CPZ02_RS26045 () | 111495..112133 | - | 639 | WP_000777688.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CPZ02_RS26050 () | 112142..113134 | - | 993 | WP_000830187.1 | conjugal transfer pilus assembly protein TraU | - |
| CPZ02_RS26055 () | 113131..113763 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| CPZ02_RS26060 () | 113760..114146 | - | 387 | WP_096488215.1 | type-F conjugative transfer system protein TrbI | - |
| CPZ02_RS26065 () | 114143..116770 | - | 2628 | WP_096488216.1 | type IV secretion system protein TraC | - |
| CPZ02_RS26070 () | 116930..117151 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| CPZ02_RS26075 () | 117286..117801 | - | 516 | WP_096488217.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CPZ02_RS26080 () | 117798..118049 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| CPZ02_RS26085 () | 118061..118291 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| CPZ02_RS26090 () | 118245..118835 | - | 591 | WP_000002792.1 | conjugal transfer protein TraP | - |
| CPZ02_RS26095 () | 118825..120252 | - | 1428 | WP_000146692.1 | conjugal transfer protein TraB | - |
| CPZ02_RS26100 () | 120252..120956 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| CPZ02_RS26105 () | 120967..121533 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| CPZ02_RS26110 () | 121555..121866 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| CPZ02_RS26115 () | 121881..122246 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| CPZ02_RS26120 () | 122279..122674 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| CPZ02_RS26125 () | 122773..123462 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| CPZ02_RS26130 () | 123649..124032 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| CPZ02_RS26135 () | 124353..124955 | + | 603 | WP_000243709.1 | hypothetical protein | VF |
| CPZ02_RS26140 () | 125252..126073 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| CPZ02_RS26145 () | 126198..126485 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| CPZ02_RS26160 () | 127261..127419 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 127463..127687 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 127463..127687 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 127463..127687 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 127463..127687 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| CPZ02_RS26165 () | 127656..128417 | - | 762 | Protein_122 | plasmid SOS inhibition protein A | - |
| CPZ02_RS26170 () | 128414..128848 | - | 435 | WP_000845895.1 | conjugation system SOS inhibitor PsiB | - |
| CPZ02_RS26175 () | 128903..130861 | - | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| CPZ02_RS26180 () | 130920..131153 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| CPZ02_RS26185 () | 131209..131736 | - | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| CPZ02_RS26205 () | 132209..132451 | - | 243 | WP_096488219.1 | hypothetical protein | - |
| CPZ02_RS26215 () | 132603..133166 | - | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| CPZ02_RS26220 () | 133212..134573 | - | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
| CPZ02_RS26225 () | 134625..134855 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| CPZ02_RS29175 () | 135533..135861 | + | 329 | Protein_131 | pilus assembly protein | - |
| CPZ02_RS26245 () | 135849..136031 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| CPZ02_RS26250 () | 136031..136492 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| CPZ02_RS26255 () | 136492..136794 | - | 303 | WP_072256028.1 | antirestriction protein | - |
| CPZ02_RS26265 () | 137319..138290 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| CPZ02_RS26270 () | 138551..138763 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| CPZ02_RS26275 () | 138776..139351 | - | 576 | WP_000343071.1 | hypothetical protein | - |
| CPZ02_RS29180 () | 139420..139758 | - | 339 | WP_001513511.1 | hypothetical protein | - |
| CPZ02_RS26290 () | 140570..141541 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CPZ02_RS26295 () | 141541..142707 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| CPZ02_RS26300 () | 143007..143704 | - | 698 | Protein_141 | IS1 family transposase IS1S | Transposase |
| CPZ02_RS26310 () | 145312..145503 | - | 192 | WP_000925960.1 | hypothetical protein | - |
| CPZ02_RS26315 () | 145729..147231 | - | 1503 | WP_000715081.1 | hypothetical protein | - |
| CPZ02_RS26320 () | 147857..148306 | - | 450 | WP_000238252.1 | hypothetical protein | - |
| CPZ02_RS26325 () | 148424..148903 | + | 480 | WP_096488220.1 | peptidase M14 | - |
| CPZ02_RS26335 () | 149343..150005 | + | 663 | WP_000163251.1 | hypothetical protein | - |
| CPZ02_RS26340 () | 150016..150713 | - | 698 | Protein_147 | IS1 family transposase IS1G | Transposase |
| CPZ02_RS26355 () | 151238..153439 | - | 2202 | WP_000973517.1 | Ferric aerobactin receptor | VF |
| CPZ02_RS26360 () | 153521..154798 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| CPZ02_RS26365 () | 154795..156537 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| CPZ02_RS26370 () | 156537..157484 | - | 948 | WP_000011907.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| CPZ02_RS26375 () | 157485..159209 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| CPZ02_RS26380 () | 159345..160538 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| CPZ02_RS26385 () | 160919..161299 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| CPZ02_RS26395 () | 161640..162053 | - | 414 | Protein_155 | phosphopyruvate hydratase | - |
| CPZ02_RS26400 () | 162051..162308 | + | 258 | Protein_156 | Tn3 family transposase | - |
| CPZ02_RS26405 () | 162542..163399 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| CPZ02_RS26410 () | 163396..164253 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| CPZ02_RS26415 () | 164250..165077 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| CPZ02_RS26420 () | 165077..165991 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| CPZ02_RS26435 () | 166347..167044 | + | 698 | Protein_161 | IS1 family transposase IS1S | Transposase |
| CPZ02_RS26440 () | 167224..167737 | - | 514 | Protein_162 | DUF4113 domain-containing protein | - |
| CPZ02_RS26445 () | 167798..167902 | - | 105 | Protein_163 | AAA family ATPase | - |
| CPZ02_RS26450 () | 167904..168227 | - | 324 | Protein_164 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|