MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 143540 bp
Accession: NZ_AP017376 Location: 1..143540 Organism: Stanieria sp. NIES-3757 Replicon: plasmid plasmid1 DNA
Accession: NZ_AP017376 Location: 1..143540 Organism: Stanieria sp. NIES-3757 Replicon: plasmid plasmid1 DNA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STA3757_RS23880 () | 3..1037 | - | 1035 | Protein_0 | hypothetical protein | - |
| STA3757_RS23885 () | 1354..2331 | - | 978 | WP_096388213.1 | hypothetical protein | - |
| STA3757_RS23890 () | 2328..3068 | - | 741 | WP_096388215.1 | mobilization protein MobD | - |
| STA3757_RS23895 () | 3180..3527 | + | 348 | WP_096388217.1 | hypothetical protein | - |
| STA3757_RS23900 () | 3592..4278 | - | 687 | WP_096388219.1 | Transcriptional regulatory protein DegU | VF |
| STA3757_RS23905 () | 4676..4924 | + | 249 | WP_096388221.1 | hypothetical protein | - |
| STA3757_RS23910 () | 5092..6345 | - | 1254 | WP_096388223.1 | ParM/StbA family protein | - |
| STA3757_RS23915 () | 6394..6993 | - | 600 | WP_096388225.1 | hypothetical protein | - |
| STA3757_RS23920 () | 7519..7893 | + | 375 | WP_015211992.1 | hypothetical protein | - |
| STA3757_RS23925 () | 7890..9398 | + | 1509 | WP_096388227.1 | hypothetical protein | Relaxase |
| STA3757_RS23930 () | 9447..9956 | + | 510 | WP_096388229.1 | hypothetical protein | - |
| STA3757_RS23935 () | 9970..10260 | + | 291 | WP_096388231.1 | hypothetical protein | - |
| STA3757_RS23940 () | 10277..10768 | - | 492 | WP_015211996.1 | RES family NAD+ phosphorylase | - |
| STA3757_RS23945 () | 10770..11189 | - | 420 | WP_096388233.1 | DUF2384 domain-containing protein | - |
| STA3757_RS23950 () | 11345..12502 | + | 1158 | WP_096388235.1 | hypothetical protein | - |
| STA3757_RS23955 () | 12580..13740 | - | 1161 | WP_096382424.1 | IS630 family transposase ISMae23 | Transposase |
| STA3757_RS23960 () | 13804..14067 | + | 264 | WP_096388237.1 | hypothetical protein | - |
| STA3757_RS23965 () | 14559..15104 | + | 546 | WP_096388239.1 | siphovirus Gp157 family protein | - |
| STA3757_RS23970 () | 15106..15477 | + | 372 | WP_096388241.1 | hypothetical protein | - |
| STA3757_RS23975 () | 15474..15659 | + | 186 | WP_096388243.1 | hypothetical protein | - |
| STA3757_RS23980 () | 15656..15904 | + | 249 | WP_096388245.1 | hypothetical protein | - |
| STA3757_RS23985 () | 15981..16568 | + | 588 | WP_096388247.1 | Uma2 family endonuclease | - |
| STA3757_RS23990 () | 16577..17449 | - | 873 | WP_096388249.1 | hypothetical protein | - |
| STA3757_RS23995 () | 17790..18113 | - | 324 | WP_041620505.1 | helix-turn-helix domain-containing protein | - |
| STA3757_RS24000 () | 18128..18409 | - | 282 | WP_096388425.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| STA3757_RS24005 () | 18435..19495 | - | 1061 | Protein_25 | IS630 family transposase ISAtsp4 | Transposase |
| STA3757_RS24010 () | 19818..20774 | + | 957 | WP_096388251.1 | site-specific integrase | - |
| STA3757_RS24015 () | 20797..21096 | - | 300 | WP_096388253.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| STA3757_RS24020 () | 21108..21401 | - | 294 | WP_096388255.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| STA3757_RS24025 () | 21463..23697 | - | 2235 | WP_096388257.1 | AAA family ATPase | - |
| STA3757_RS24030 () | 23756..27307 | - | 3552 | WP_096388259.1 | DUF3854 domain-containing protein | - |
| STA3757_RS24035 () | 27986..29437 | - | 1452 | WP_096388261.1 | helix-turn-helix domain-containing protein | - |
| STA3757_RS24040 () | 29631..30689 | + | 1059 | WP_096383271.1 | IS701 family transposase ISAeme11 | Transposase |
| STA3757_RS24045 () | 30775..31560 | - | 786 | Protein_33 | IS1 family transposase ISMae3 | Transposase |
| STA3757_RS24050 () | 31648..32151 | - | 504 | Protein_34 | IS630 family transposase ISTcSa | Transposase |
| STA3757_RS24055 () | 32165..32755 | - | 591 | Protein_35 | IS5 family transposase ISMdi26 | Transposase |
| STA3757_RS24060 () | 32758..33066 | - | 309 | WP_096379418.1 | IS5 family transposase IS5Sa2 | Transposase |
| STA3757_RS24065 () | 33119..33475 | - | 357 | WP_096388263.1 | ISL3 family transposase ISAcma23 | Transposase |
| STA3757_RS24070 () | 33506..33706 | - | 201 | WP_096388265.1 | hypothetical protein | - |
| STA3757_RS24075 () | 34238..34480 | + | 243 | WP_096388267.1 | IS630 family transposase ISNpu2 | Transposase |
| STA3757_RS24080 () | 34627..36351 | + | 1725 | WP_096388427.1 | mechanosensitive ion channel family protein | - |
| STA3757_RS24085 () | 36598..36747 | + | 150 | Protein_41 | IS1 family transposase | - |
| STA3757_RS24090 () | 36918..37685 | + | 768 | WP_096388269.1 | pyrroloquinoline quinone biosynthesis protein | - |
| STA3757_RS24095 () | 37689..38384 | + | 696 | WP_096388271.1 | 3-oxoacyl-ACP reductase FabG | - |
| STA3757_RS24100 () | 38664..39596 | + | 933 | WP_096388273.1 | AAA family ATPase | - |
| STA3757_RS24105 () | 39632..39970 | + | 339 | WP_096388275.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| STA3757_RS24110 () | 39963..40262 | + | 300 | WP_096388277.1 | putative addiction module antidote protein | - |
| STA3757_RS24115 () | 40538..41598 | - | 1061 | Protein_47 | IS630 family transposase ISAtsp4 | Transposase |
| STA3757_RS24120 () | 41697..43052 | - | 1356 | WP_096379552.1 | IS701 family transposase ISAcma24 | Transposase |
| STA3757_RS24125 () | 43326..46913 | - | 3588 | WP_096388279.1 | NACHT domain-containing protein | - |
| STA3757_RS24130 () | 47177..48592 | + | 1416 | WP_096388281.1 | hypothetical protein | - |
| STA3757_RS24135 () | 48631..52224 | + | 3594 | WP_096388283.1 | hypothetical protein | - |
| STA3757_RS24140 () | 52386..53063 | - | 678 | WP_096388285.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| STA3757_RS24145 () | 53074..54246 | - | 1173 | WP_096388287.1 | ABC transporter permease DevC | - |
| STA3757_RS24150 () | 54243..55565 | - | 1323 | WP_096388289.1 | ABC exporter membrane fusion protein | - |
| STA3757_RS24155 () | 55605..56915 | - | 1311 | WP_096388291.1 | cytochrome P450 | - |
| STA3757_RS24160 () | 57013..58170 | - | 1158 | WP_096388293.1 | sulfotransferase | - |
| STA3757_RS24165 () | 58163..59518 | - | 1356 | WP_096388295.1 | hypothetical protein | - |
| STA3757_RS24170 () | 60066..61124 | + | 1059 | WP_096383271.1 | IS701 family transposase ISAeme11 | Transposase |
| STA3757_RS24175 () | 61178..62023 | - | 846 | WP_096388297.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| STA3757_RS24180 () | 62033..62629 | - | 597 | WP_096388299.1 | glutathione S-transferase family protein | - |
| STA3757_RS24185 () | 62842..63084 | - | 243 | WP_096388301.1 | DUF4278 domain-containing protein | - |
| STA3757_RS24190 () | 63471..67061 | + | 3591 | WP_096388303.1 | PD40 domain-containing protein | - |
| STA3757_RS24195 () | 67338..67571 | - | 234 | WP_096388305.1 | Nif11-like leader peptide family RiPP precursor | - |
| STA3757_RS24200 () | 67757..68116 | + | 360 | WP_096388307.1 | hypothetical protein | - |
| STA3757_RS24205 () | 68146..69186 | - | 1041 | WP_096388309.1 | ParB/RepB/Spo0J family partition protein | - |
| STA3757_RS24210 () | 69195..69785 | - | 591 | Protein_66 | IS5 family transposase ISMdi26 | Transposase |
| STA3757_RS24215 () | 69788..70096 | - | 309 | WP_096379418.1 | IS5 family transposase IS5Sa2 | Transposase |
| STA3757_RS24220 () | 70937..73438 | + | 2502 | WP_096388311.1 | CPBP family intramembrane metalloprotease | - |
| STA3757_RS24225 () | 73517..74149 | - | 633 | WP_096388314.1 | Tyrosine recombinase XerD | VF |
| STA3757_RS24230 () | 74220..75623 | - | 1404 | WP_096388316.1 | ISKra4 family transposase ISCep1 | Transposase |
| STA3757_RS24235 () | 75620..76294 | - | 675 | WP_096388318.1 | plasmid pRiA4b ORF-3 family protein | - |
| STA3757_RS24240 () | 76516..76764 | + | 249 | WP_015211880.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| STA3757_RS24245 () | 76754..77149 | + | 396 | WP_096388320.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| STA3757_RS24250 () | 77286..77543 | + | 258 | Protein_74 | hypothetical protein | - |
| STA3757_RS24255 () | 77543..78034 | + | 492 | WP_096388322.1 | hypothetical protein | - |
| STA3757_RS24260 () | 78060..78701 | + | 642 | WP_096388324.1 | hypothetical protein | - |
| STA3757_RS24265 () | 78879..79832 | + | 954 | WP_096388326.1 | tyrosine-type recombinase/integrase | - |
| STA3757_RS24270 () | 79965..80780 | + | 816 | WP_096388328.1 | hypothetical protein | - |
| STA3757_RS24275 () | 80788..81294 | - | 507 | WP_096383530.1 | IS5 family transposase ISAs34 | Transposase |
| STA3757_RS24280 () | 81260..81607 | - | 348 | WP_096387865.1 | IS5 family transposase ISBugl2 | Transposase |
| STA3757_RS24285 () | 81696..81947 | - | 252 | WP_071882437.1 | WGR domain-containing protein | - |
| STA3757_RS24290 () | 82084..82956 | + | 873 | WP_096388330.1 | hypothetical protein | - |
| STA3757_RS24295 () | 82938..83663 | + | 726 | WP_096388332.1 | hypothetical protein | - |
| STA3757_RS24300 () | 83817..84350 | - | 534 | WP_096388334.1 | hypothetical protein | - |
| STA3757_RS24305 () | 84371..85168 | - | 798 | WP_096388336.1 | Sporulation initiation inhibitor protein Soj | VF |
| STA3757_RS24310 () | 85633..86223 | - | 591 | Protein_86 | IS5 family transposase ISMdi26 | Transposase |
| STA3757_RS24315 () | 86226..86504 | - | 279 | WP_096388338.1 | IS5 family transposase IS5Sa2 | Transposase |
| STA3757_RS24320 () | 86507..87567 | - | 1061 | Protein_88 | IS630 family transposase ISAtsp4 | Transposase |
| STA3757_RS24325 () | 87773..88450 | + | 678 | WP_015211937.1 | response regulator transcription factor | - |
| STA3757_RS24330 () | 88474..90408 | - | 1935 | WP_096388340.1 | type IV secretory system conjugative DNA transfer family protein | - |
| STA3757_RS24335 () | 90537..91469 | + | 933 | WP_096388342.1 | hypothetical protein | - |
| STA3757_RS24340 () | 91808..93733 | + | 1926 | WP_096388344.1 | DNA-directed DNA polymerase | - |
| STA3757_RS24345 () | 93827..94093 | + | 267 | WP_015211941.1 | CopG family protein | Antitoxin Detail |
| STA3757_RS24350 () | 94098..94445 | + | 348 | WP_015211942.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| STA3757_RS24355 () | 94472..95452 | - | 981 | WP_096388346.1 | hypothetical protein | - |
| STA3757_RS24360 () | 95528..95809 | + | 282 | WP_015211944.1 | hypothetical protein | - |
| STA3757_RS24365 () | 96037..96693 | - | 657 | WP_096388348.1 | hypothetical protein | - |
| STA3757_RS24370 () | 96783..97124 | - | 342 | WP_096388429.1 | hypothetical protein | - |
| STA3757_RS24375 () | 97165..98913 | - | 1749 | WP_096388350.1 | VWA domain-containing protein | - |
| STA3757_RS24380 () | 99043..99399 | - | 357 | WP_096388352.1 | hypothetical protein | - |
| STA3757_RS24385 () | 99582..100367 | - | 786 | WP_096388354.1 | hypothetical protein | - |
| STA3757_RS24390 () | 100490..101275 | - | 786 | WP_096388356.1 | serine protease | - |
| STA3757_RS24395 () | 101722..103107 | + | 1386 | WP_096388358.1 | GUN4 domain-containing protein | - |
| STA3757_RS24400 () | 103109..103666 | - | 558 | WP_096388360.1 | Uma2 family endonuclease | - |
| STA3757_RS24405 () | 103746..104978 | - | 1233 | WP_096388362.1 | IS200-IS605 family transposase ISTel3 | Transposase |
| STA3757_RS24410 () | 105028..105792 | - | 765 | WP_096388364.1 | FHA domain-containing protein | - |
| STA3757_RS24415 () | 106062..106610 | + | 549 | Protein_107 | Putative serine protease HtrA | VF |
| STA3757_RS24420 () | 106672..106980 | + | 309 | WP_096379418.1 | IS5 family transposase IS5Sa2 | Transposase |
| STA3757_RS24425 () | 106983..107573 | + | 591 | Protein_109 | IS5 family transposase ISMdi26 | Transposase |
| STA3757_RS24430 () | 107591..108178 | + | 588 | Protein_110 | Putative serine protease HhoA | VF |
| STA3757_RS24435 () | 108213..108767 | + | 555 | WP_096388366.1 | COP23 domain-containing protein | - |
| STA3757_RS24440 () | 108947..112150 | + | 3204 | WP_096388368.1 | serine protease | - |
| STA3757_RS24445 () | 112352..112600 | + | 249 | WP_096388370.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| STA3757_RS24450 () | 112620..112817 | + | 198 | WP_015211958.1 | hypothetical protein | - |
| STA3757_RS24455 () | 112842..113141 | - | 300 | WP_096388372.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| STA3757_RS24460 () | 113123..113434 | + | 312 | WP_096388374.1 | nucleotidyltransferase family protein | - |
| STA3757_RS24465 () | 113466..114125 | - | 660 | WP_096388376.1 | Secreted effector protein PipB2 | VF |
| STA3757_RS24470 () | 114133..114789 | - | 657 | WP_096388378.1 | hypothetical protein | - |
| STA3757_RS24475 () | 114856..116088 | - | 1233 | WP_096388380.1 | hypothetical protein | - |
| STA3757_RS24480 () | 116576..117097 | - | 522 | WP_096388382.1 | NADAR family protein | - |
| STA3757_RS24485 () | 117202..117609 | - | 408 | Protein_121 | hypothetical protein | - |
| STA3757_RS24490 () | 117635..118695 | - | 1061 | Protein_122 | IS630 family transposase ISAtsp4 | Transposase |
| STA3757_RS24495 () | 118794..120149 | - | 1356 | WP_096379552.1 | IS701 family transposase ISAcma24 | Transposase |
| STA3757_RS24500 () | 120208..121239 | - | 1032 | Protein_124 | hypothetical protein | - |
| STA3757_RS24505 () | 121354..121608 | + | 255 | WP_096388384.1 | toxin HicA | - |
| STA3757_RS24510 () | 121601..121969 | + | 369 | WP_096388386.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| STA3757_RS24515 () | 122176..123609 | + | 1434 | WP_096388388.1 | ABC transporter substrate-binding protein | - |
| STA3757_RS24520 () | 123622..125358 | - | 1737 | WP_096388390.1 | FUSC family protein | - |
| STA3757_RS24525 () | 125385..126608 | - | 1224 | WP_096388392.1 | DUF1822 family protein | - |
| STA3757_RS24530 () | 126663..128234 | - | 1572 | WP_096388394.1 | hypothetical protein | - |
| STA3757_RS24535 () | 128312..128512 | + | 201 | WP_096388396.1 | hypothetical protein | - |
| STA3757_RS24540 () | 128556..128978 | - | 423 | WP_096388398.1 | hypothetical protein | - |
| STA3757_RS24545 () | 129105..129314 | - | 210 | WP_096388400.1 | hypothetical protein | - |
| STA3757_RS24550 () | 129914..130288 | - | 375 | WP_096388402.1 | hypothetical protein | - |
| STA3757_RS24555 () | 130491..131039 | - | 549 | Protein_135 | hypothetical protein | - |
| STA3757_RS24560 () | 131145..131411 | - | 267 | WP_015211974.1 | hypothetical protein | - |
| STA3757_RS24565 () | 131585..131797 | + | 213 | WP_096388404.1 | hypothetical protein | - |
| STA3757_RS24570 () | 131802..132110 | + | 309 | WP_096388406.1 | hypothetical protein | - |
| STA3757_RS24575 () | 132110..132535 | + | 426 | WP_096388408.1 | type II toxin-antitoxin system VapC family toxin | - |
| STA3757_RS24580 () | 132826..134433 | - | 1608 | WP_015211978.1 | AAA family ATPase | - |
| STA3757_RS24585 () | 134600..135112 | + | 513 | WP_096388410.1 | hypothetical protein | - |
| STA3757_RS24590 () | 135087..135206 | - | 120 | Protein_142 | peptidase | - |
| STA3757_RS24595 () | 135303..136238 | + | 936 | WP_096388412.1 | SprT-like domain-containing protein | - |
| STA3757_RS24600 () | 136371..137417 | + | 1047 | WP_096388414.1 | Fic family protein | - |
| STA3757_RS24605 () | 137459..138712 | - | 1254 | WP_096388417.1 | toprim domain-containing protein | - |
| STA3757_RS24610 () | 138712..140184 | - | 1473 | WP_096388419.1 | hypothetical protein | - |
| STA3757_RS24615 () | 140352..140702 | + | 351 | WP_096388421.1 | four helix bundle protein | - |
| STA3757_RS24620 () | 140781..140975 | + | 195 | WP_096388423.1 | hypothetical protein | - |
| STA3757_RS24625 () | 140977..142332 | - | 1356 | WP_096379552.1 | IS701 family transposase ISAcma24 | Transposase |
| STA3757_RS24630 () | 142454..143514 | + | 1061 | Protein_150 | IS630 family transposase ISAtsp4 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|