MGE detailed information
MGE type: Prophage MGE length: 55352 bp
Accession: NZ_AP012496 Location: 2479545..2534896 Organism: Bacillus subtilis BEST7003 Replicon: chromosome
Accession: NZ_AP012496 Location: 2479545..2534896 Organism: Bacillus subtilis BEST7003 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEST7003_RS12285 () | 2474633..2474989 | - | 357 | WP_003229971.1 | ribosome silencing factor | - |
| BEST7003_RS12290 () | 2475007..2475567 | - | 561 | WP_004399059.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| BEST7003_RS12295 () | 2475557..2476126 | - | 570 | WP_004398676.1 | nicotinate-nucleotide adenylyltransferase | - |
| BEST7003_RS12300 () | 2476138..2476428 | - | 291 | WP_003226133.1 | ribosome assembly RNA-binding protein YhbY | - |
| BEST7003_RS12305 () | 2476422..2477264 | - | 843 | WP_003229967.1 | shikimate dehydrogenase | - |
| BEST7003_RS12310 () | 2477282..2478382 | - | 1101 | WP_003229966.1 | ribosome biogenesis GTPase YqeH | - |
| BEST7003_RS12315 () | 2478386..2478904 | - | 519 | WP_003226126.1 | YqeG family HAD IIIA-type phosphatase | - |
| BEST7003_RS12320 () | 2479266..2479406 | + | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| BEST7003_RS12325 () | 2479712..2480443 | - | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| BEST7003_RS12330 () | 2480695..2481447 | - | 753 | WP_003229963.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| BEST7003_RS12335 () | 2481634..2482260 | + | 627 | WP_003229962.1 | TVP38/TMEM64 family protein | - |
| BEST7003_RS12340 () | 2482279..2483172 | - | 894 | WP_003229961.1 | 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating | VF |
| BEST7003_RS12345 () | 2483424..2484146 | + | 723 | WP_010886572.1 | hypothetical protein | - |
| BEST7003_RS12350 () | 2484179..2484589 | - | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | - |
| BEST7003_RS12355 () | 2484785..2485132 | + | 348 | Protein_2465 | sigma-70 family RNA polymerase sigma factor | - |
| BEST7003_RS12360 () | 2485163..2486665 | - | 1503 | WP_010886573.1 | Transposon gamma-delta resolvase ; Integrase | Integrase |
| BEST7003_RS12365 () | 2487114..2487533 | - | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| BEST7003_RS12370 () | 2487545..2488585 | - | 1041 | WP_004398718.1 | arsenite efflux transporter Acr3 | - |
| BEST7003_RS12375 () | 2488608..2489048 | - | 441 | WP_003229954.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| BEST7003_RS12380 () | 2489109..2489426 | - | 318 | WP_004399122.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| BEST7003_RS12385 () | 2489798..2490562 | - | 765 | WP_004398670.1 | YqcI/YcgG family protein | - |
| BEST7003_RS12390 () | 2491005..2492132 | + | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| BEST7003_RS12395 () | 2492122..2492256 | + | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| BEST7003_RS20860 () | 2492366..2492524 | + | 159 | WP_003245945.1 | hypothetical protein | - |
| BEST7003_RS12400 () | 2492894..2494489 | + | 1596 | WP_004399034.1 | type II toxin-antitoxin system toxin ribonuclease YqcG | - |
| BEST7003_RS12405 () | 2494504..2495082 | + | 579 | WP_009967790.1 | type II toxin-antitoxin system antitoxin YqcF | - |
| BEST7003_RS21835 () | 2495200..2495346 | + | 147 | WP_009967791.1 | hypothetical protein | - |
| BEST7003_RS12410 () | 2495343..2495705 | - | 363 | WP_003229947.1 | hypothetical protein | - |
| BEST7003_RS12415 () | 2495721..2496200 | - | 480 | WP_004399085.1 | hypothetical protein | - |
| BEST7003_RS12420 () | 2496365..2497183 | - | 819 | WP_003229946.1 | N-acetylmuramoyl-L-alanine amidase CwlA | VF |
| BEST7003_RS12425 () | 2497228..2497650 | - | 423 | WP_003246208.1 | holin family protein | - |
| BEST7003_RS12430 () | 2497695..2498588 | - | 894 | WP_003246010.1 | hypothetical protein | - |
| BEST7003_RS12435 () | 2498676..2498840 | - | 165 | WP_003229944.1 | XkdX family protein | - |
| BEST7003_RS12440 () | 2498837..2499172 | - | 336 | WP_009967793.1 | XkdW family protein | - |
| BEST7003_RS12445 () | 2499182..2500282 | - | 1101 | WP_003229943.1 | pyocin knob domain-containing protein | - |
| BEST7003_RS12450 () | 2500285..2500557 | - | 273 | WP_003229942.1 | hypothetical protein | - |
| BEST7003_RS12455 () | 2500554..2501132 | - | 579 | WP_003229941.1 | YmfQ family protein | - |
| BEST7003_RS12460 () | 2501116..2502162 | - | 1047 | WP_003229940.1 | baseplate J/gp47 family protein | - |
| BEST7003_RS12465 () | 2502155..2502580 | - | 426 | WP_004398572.1 | DUF2634 domain-containing protein | - |
| BEST7003_RS12470 () | 2502593..2502856 | - | 264 | WP_003229938.1 | DUF2577 family protein | - |
| BEST7003_RS12475 () | 2502853..2503833 | - | 981 | WP_004398524.1 | hypothetical protein | - |
| BEST7003_RS12480 () | 2503846..2504505 | - | 660 | WP_004398548.1 | LysM peptidoglycan-binding domain-containing protein | - |
| BEST7003_RS12485 () | 2504498..2509255 | - | 4758 | WP_003246092.1 | transglycosylase SLT domain-containing protein | - |
| BEST7003_RS20870 () | 2509258..2509395 | - | 138 | WP_003229934.1 | hypothetical protein | - |
| BEST7003_RS12490 () | 2509437..2509886 | - | 450 | WP_003229933.1 | phage portal protein | - |
| BEST7003_RS12495 () | 2510032..2510211 | + | 180 | WP_004398662.1 | type I toxin-antitoxin system toxin TxpA | Toxin Detail |
| - () | 2510135..2510357 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2510135..2510357 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2510135..2510357 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2510135..2510357 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| BEST7003_RS21840 () | 2510591..2510680 | + | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| BEST7003_RS12500 () | 2510934..2511377 | - | 444 | WP_003229930.1 | phage tail tube protein | - |
| BEST7003_RS12505 () | 2511380..2512780 | - | 1401 | WP_003229929.1 | phage tail sheath family protein | - |
| BEST7003_RS12510 () | 2512781..2512972 | - | 192 | WP_010886574.1 | hypothetical protein | - |
| BEST7003_RS12515 () | 2512969..2513406 | - | 438 | WP_003229927.1 | hypothetical protein | - |
| BEST7003_RS12520 () | 2513419..2513922 | - | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| BEST7003_RS12525 () | 2513919..2514281 | - | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| BEST7003_RS12530 () | 2514278..2514673 | - | 396 | WP_004398566.1 | DUF3199 family protein | - |
| BEST7003_RS12535 () | 2514677..2514988 | - | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| BEST7003_RS12540 () | 2514999..2515934 | - | 936 | WP_003229922.1 | phage major capsid protein | - |
| BEST7003_RS12545 () | 2515953..2516921 | - | 969 | WP_003229921.1 | phage portal protein | - |
| BEST7003_RS12550 () | 2516954..2517607 | - | 654 | WP_003229920.1 | hypothetical protein | - |
| BEST7003_RS12555 () | 2517648..2518565 | - | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| BEST7003_RS12560 () | 2518562..2520094 | - | 1533 | WP_004398894.1 | phage portal protein | - |
| BEST7003_RS12565 () | 2520098..2521393 | - | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| BEST7003_RS12570 () | 2521386..2522105 | - | 720 | WP_003229916.1 | hypothetical protein | - |
| BEST7003_RS12575 () | 2522173..2522637 | - | 465 | WP_004398685.1 | hypothetical protein | - |
| BEST7003_RS12580 () | 2522781..2523236 | - | 456 | WP_004398775.1 | hypothetical protein | - |
| BEST7003_RS12585 () | 2523434..2524363 | + | 930 | WP_003229913.1 | hypothetical protein | - |
| BEST7003_RS12590 () | 2524437..2524643 | - | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| BEST7003_RS12595 () | 2524725..2525153 | - | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| BEST7003_RS20880 () | 2525249..2525398 | - | 150 | WP_003229910.1 | hypothetical protein | - |
| BEST7003_RS12600 () | 2525389..2526330 | - | 942 | WP_075058863.1 | ATP-binding protein | - |
| BEST7003_RS12605 () | 2526212..2526889 | - | 678 | WP_010886575.1 | DNA-binding protein | - |
| BEST7003_RS12610 () | 2526965..2527819 | - | 855 | WP_003229907.1 | recombinase RecT | - |
| BEST7003_RS12615 () | 2527822..2528781 | - | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| BEST7003_RS12620 () | 2528887..2529081 | - | 195 | WP_003229905.1 | hypothetical protein | - |
| BEST7003_RS21845 () | 2529041..2529214 | - | 174 | WP_119123069.1 | hypothetical protein | - |
| BEST7003_RS12625 () | 2529211..2529468 | - | 258 | WP_003245994.1 | hypothetical protein | - |
| BEST7003_RS12630 () | 2529465..2530034 | - | 570 | WP_004398626.1 | helix-turn-helix transcriptional regulator | - |
| BEST7003_RS20885 () | 2530108..2530248 | - | 141 | WP_003229902.1 | hypothetical protein | - |
| BEST7003_RS12635 () | 2530278..2530508 | - | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| BEST7003_RS12640 () | 2530685..2531035 | + | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
| BEST7003_RS20890 () | 2531302..2531469 | - | 168 | WP_003229900.1 | hypothetical protein | - |
| BEST7003_RS12645 () | 2531825..2532361 | - | 537 | WP_004399117.1 | AAA family ATPase | - |
| BEST7003_RS12650 () | 2532630..2533148 | + | 519 | WP_004399097.1 | ImmA/IrrE family metallo-endopeptidase | - |
| BEST7003_RS12655 () | 2533154..2533546 | + | 393 | Protein_2533 | sigma-70 family RNA polymerase sigma factor | - |
| BEST7003_RS21850 () | 2533546..2533662 | + | 117 | WP_003229898.1 | hypothetical protein | - |
| BEST7003_RS21440 () | 2533628..2533828 | - | 201 | Protein_2535 | recombinase family protein | - |
| BEST7003_RS21445 () | 2533771..2533935 | - | 165 | WP_010886576.1 | hypothetical protein | - |
| BEST7003_RS12660 () | 2534480..2534896 | - | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
| BEST7003_RS12665 () | 2534942..2536240 | - | 1299 | WP_003246194.1 | two-component system sensor histidine kinase YrkQ | - |
| BEST7003_RS12670 () | 2536227..2536922 | - | 696 | WP_003229895.1 | two-component response regulator YrkP | - |
| BEST7003_RS12675 () | 2537190..2538407 | + | 1218 | WP_003229894.1 | DUF418 domain-containing protein | - |
| BEST7003_RS21855 () | 2538326..2538574 | + | 249 | WP_119123070.1 | hypothetical protein | - |
| BEST7003_RS12680 () | 2538919..2539476 | + | 558 | WP_003229892.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | Prophage | TA6322, TA10201, TA20260 | NC_000964 | 2645490..2699243 | 0.003 |