MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 102790 bp
Accession: NC_022808 Location: 4518241..4621030 Organism: Pseudomonas aeruginosa PA1 Replicon: chromosome
Accession: NC_022808 Location: 4518241..4621030 Organism: Pseudomonas aeruginosa PA1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA1S_RS20995 (PA1S_21010) | 4513730..4514341 | - | 612 | WP_004348355.1 | type 1 fimbrial protein | - |
| PA1S_RS21000 (PA1S_21015) | 4514784..4515161 | - | 378 | WP_003117019.1 | Hpt domain-containing protein | - |
| PA1S_RS21005 (PA1S_21020) | 4515746..4516384 | + | 639 | WP_003120654.1 | NUDIX hydrolase | - |
| PA1S_RS21010 (PA1S_21025) | 4516769..4517329 | + | 561 | WP_003117022.1 | hypothetical protein | - |
| PA1S_RS21015 (PA1S_21030) | 4517450..4517854 | - | 405 | WP_003112559.1 | acyl-CoA thioesterase | - |
| PA1S_RS21020 (PA1S_21035) | 4518379..4519245 | + | 867 | WP_023518463.1 | ParA family protein | - |
| PA1S_RS21025 (PA1S_21040) | 4519247..4519984 | + | 738 | WP_003117024.1 | hypothetical protein | - |
| PA1S_RS21030 (PA1S_21045) | 4519981..4520478 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| PA1S_RS21035 (PA1S_21050) | 4520484..4521185 | + | 702 | WP_023518461.1 | DUF2786 domain-containing protein | - |
| PA1S_RS21040 (PA1S_21055) | 4521304..4522650 | + | 1347 | WP_003122067.1 | replicative DNA helicase | - |
| PA1S_RS21050 (PA1S_21065) | 4522822..4523349 | + | 528 | WP_003117030.1 | hypothetical protein | - |
| PA1S_RS21055 (PA1S_21070) | 4523346..4523600 | + | 255 | WP_023518460.1 | hypothetical protein | - |
| PA1S_RS31315 | 4523593..4524090 | + | 498 | WP_144426470.1 | hypothetical protein | - |
| PA1S_RS21065 (PA1S_21080) | 4524083..4524316 | + | 234 | WP_023518459.1 | hypothetical protein | - |
| PA1S_RS21070 (PA1S_21085) | 4524316..4525332 | + | 1017 | WP_023518458.1 | nucleoid-associated protein YejK | - |
| PA1S_RS21075 (PA1S_21090) | 4525335..4525583 | + | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| PA1S_RS21080 (PA1S_21095) | 4525580..4527316 | + | 1737 | WP_023518457.1 | ParB family protein | - |
| PA1S_RS21085 (PA1S_21100) | 4527344..4528111 | + | 768 | WP_003134101.1 | DUF2857 domain-containing protein | - |
| PA1S_RS30865 | 4528108..4529433 | + | 1326 | WP_023518456.1 | hypothetical protein | - |
| PA1S_RS31400 | 4529598..4529747 | - | 150 | WP_153562303.1 | hypothetical protein | - |
| PA1S_RS21095 (PA1S_21110) | 4529776..4529973 | + | 198 | WP_003105756.1 | hypothetical protein | - |
| PA1S_RS21100 (PA1S_21115) | 4530130..4530858 | + | 729 | WP_023518455.1 | TIGR03761 family integrating conjugative element protein | - |
| PA1S_RS21105 (PA1S_21120) | 4530864..4531412 | + | 549 | WP_043487169.1 | DUF3158 family protein | - |
| PA1S_RS21110 (PA1S_21125) | 4531460..4532302 | + | 843 | WP_023518453.1 | Rha family transcriptional regulator | - |
| PA1S_RS21115 (PA1S_21130) | 4532332..4532820 | + | 489 | WP_023518452.1 | single-stranded DNA-binding protein | - |
| PA1S_RS21120 (PA1S_21135) | 4532924..4533118 | + | 195 | WP_033995542.1 | hypothetical protein | - |
| PA1S_RS31320 | 4533212..4533331 | + | 120 | WP_194736251.1 | CrpP family protein | - |
| PA1S_RS21125 (PA1S_21140) | 4533446..4535365 | + | 1920 | WP_043487167.1 | type IA DNA topoisomerase | - |
| PA1S_RS21130 (PA1S_21145) | 4535373..4536125 | + | 753 | WP_023518450.1 | hypothetical protein | - |
| PA1S_RS21135 (PA1S_21150) | 4536446..4538335 | + | 1890 | WP_023518449.1 | hypothetical protein | - |
| PA1S_RS21140 (PA1S_21155) | 4538332..4540263 | + | 1932 | Protein_4207 | DEAD/DEAH box helicase | - |
| PA1S_RS31325 | 4540606..4541139 | + | 534 | WP_126589955.1 | hypothetical protein | - |
| PA1S_RS31330 | 4541371..4541838 | - | 468 | WP_126589954.1 | pyocin S2 immunity protein | - |
| PA1S_RS30875 (PA1S_21160) | 4541838..4544192 | - | 2355 | WP_194736250.1 | S-type pyocin domain-containing protein | - |
| PA1S_RS21155 (PA1S_21165) | 4544736..4545860 | + | 1125 | WP_043487165.1 | hypothetical protein | VF |
| PA1S_RS21160 (PA1S_21170) | 4545860..4547569 | + | 1710 | WP_003123331.1 | hypothetical protein | VF |
| PA1S_RS21165 (PA1S_21175) | 4547573..4548898 | + | 1326 | WP_023518445.1 | type 4b pilus protein PilO2 | - |
| PA1S_RS21170 (PA1S_21180) | 4548888..4549421 | + | 534 | WP_023104012.1 | type IV pilus biogenesis protein PilP | - |
| PA1S_RS21175 (PA1S_21185) | 4549430..4551010 | + | 1581 | WP_023101572.1 | hypothetical protein | VF |
| PA1S_RS21180 (PA1S_21190) | 4551010..4552089 | + | 1080 | WP_023518443.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PA1S_RS21185 (PA1S_21195) | 4552111..4552641 | + | 531 | WP_023518442.1 | hypothetical protein | VF |
| PA1S_RS21190 (PA1S_21200) | 4552638..4553579 | + | 942 | WP_079279919.1 | Flp pilus assembly complex ATPase component TadA | - |
| PA1S_RS21195 (PA1S_21205) | 4553584..4554912 | + | 1329 | WP_004352824.1 | hypothetical protein | VF |
| PA1S_RS21200 (PA1S_21210) | 4554941..4555378 | + | 438 | WP_023518440.1 | hypothetical protein | VF |
| PA1S_RS31490 | 4556444..4556689 | + | 246 | WP_003123340.1 | hypothetical protein | - |
| PA1S_RS31495 | 4556764..4556940 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| PA1S_RS21215 (PA1S_21225) | 4557401..4557880 | + | 480 | WP_023518439.1 | DUF3577 domain-containing protein | - |
| PA1S_RS31500 | 4558018..4558176 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| PA1S_RS21220 (PA1S_21230) | 4558250..4558447 | + | 198 | WP_015503588.1 | hypothetical protein | - |
| PA1S_RS21225 (PA1S_21235) | 4558932..4559639 | + | 708 | WP_033992394.1 | hypothetical protein | - |
| PA1S_RS21230 (PA1S_21240) | 4559875..4560225 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| PA1S_RS21235 (PA1S_21245) | 4560282..4560914 | + | 633 | WP_023518438.1 | DUF3275 family protein | - |
| PA1S_RS21240 (PA1S_21250) | 4560911..4561186 | + | 276 | WP_023518437.1 | hypothetical protein | - |
| PA1S_RS21245 (PA1S_21255) | 4561256..4561618 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| PA1S_RS21250 (PA1S_21260) | 4561686..4561940 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| PA1S_RS21255 (PA1S_21265) | 4562033..4562638 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| PA1S_RS21260 (PA1S_21270) | 4562668..4564113 | + | 1446 | WP_023518436.1 | class I SAM-dependent methyltransferase | - |
| PA1S_RS21265 (PA1S_21275) | 4564218..4566467 | + | 2250 | WP_023518435.1 | DEAD/DEAH box helicase | - |
| PA1S_RS21270 (PA1S_21280) | 4566569..4567003 | - | 435 | WP_169433239.1 | hypothetical protein | - |
| PA1S_RS21275 (PA1S_21285) | 4567151..4568341 | - | 1191 | WP_043487156.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PA1S_RS21280 (PA1S_21290) | 4568348..4571314 | - | 2967 | WP_023518433.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| PA1S_RS30885 (PA1S_21295) | 4571566..4572597 | + | 1032 | WP_043487154.1 | hypothetical protein | - |
| PA1S_RS21290 (PA1S_21300) | 4572608..4573273 | + | 666 | WP_049859794.1 | DUF3218 family protein | - |
| PA1S_RS31505 | 4573695..4574030 | + | 336 | WP_185832033.1 | hypothetical protein | - |
| PA1S_RS21295 (PA1S_21305) | 4574087..4574647 | - | 561 | WP_023102601.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| PA1S_RS21300 (PA1S_21310) | 4574900..4575172 | + | 273 | WP_023102602.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| PA1S_RS21305 (PA1S_21315) | 4575172..4575447 | + | 276 | WP_023102603.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PA1S_RS30900 | 4576547..4577407 | - | 861 | WP_079279917.1 | Cytolethal distending toxin subunit B | VF |
| PA1S_RS30905 | 4577424..4577960 | - | 537 | WP_079279916.1 | hypothetical protein | - |
| PA1S_RS30910 | 4578282..4579010 | - | 729 | WP_049859666.1 | SDR family oxidoreductase | - |
| PA1S_RS30915 | 4579645..4580283 | + | 639 | WP_049859665.1 | TetR/AcrR family transcriptional regulator | - |
| PA1S_RS21320 (PA1S_21330) | 4581043..4581723 | + | 681 | WP_049859661.1 | hypothetical protein | - |
| PA1S_RS21325 (PA1S_21335) | 4581734..4582489 | + | 756 | WP_023518430.1 | TIGR03759 family integrating conjugative element protein | - |
| PA1S_RS21330 (PA1S_21340) | 4582474..4583055 | + | 582 | WP_023518429.1 | hypothetical protein | - |
| PA1S_RS21335 (PA1S_21345) | 4583052..4583552 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| PA1S_RS21340 (PA1S_21350) | 4583561..4583740 | + | 180 | WP_043487145.1 | hypothetical protein | - |
| PA1S_RS21345 (PA1S_21355) | 4583744..4585975 | + | 2232 | WP_023518428.1 | type IV conjugative transfer system coupling protein TraD | - |
| PA1S_RS21350 (PA1S_21360) | 4585975..4586721 | + | 747 | WP_023518427.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PA1S_RS21355 (PA1S_21365) | 4586911..4590216 | + | 3306 | WP_023518426.1 | TonB-dependent receptor | - |
| PA1S_RS21360 (PA1S_21370) | 4590288..4591169 | + | 882 | WP_023518425.1 | hypothetical protein | - |
| PA1S_RS21365 (PA1S_21375) | 4591397..4592767 | + | 1371 | WP_023518424.1 | DUF560 domain-containing protein | - |
| PA1S_RS21375 (PA1S_21380) | 4592977..4593756 | + | 780 | WP_079279915.1 | Crp/Fnr family transcriptional regulator | - |
| PA1S_RS21380 (PA1S_21385) | 4593775..4595034 | - | 1260 | WP_023518422.1 | NnrS family protein | - |
| PA1S_RS21385 (PA1S_21390) | 4595031..4595819 | - | 789 | WP_023518421.1 | Taurine import ATP-binding protein TauB | VF |
| PA1S_RS21390 (PA1S_21395) | 4595816..4596598 | - | 783 | WP_155681851.1 | ABC transporter permease subunit | - |
| PA1S_RS21395 (PA1S_21400) | 4596613..4597641 | - | 1029 | WP_049859657.1 | ABC transporter substrate-binding protein | - |
| PA1S_RS21400 (PA1S_21405) | 4597883..4598191 | + | 309 | WP_023518418.1 | aconitase | - |
| PA1S_RS21405 (PA1S_21410) | 4598285..4598623 | + | 339 | WP_031670627.1 | RAQPRD family integrative conjugative element protein | - |
| PA1S_RS21410 (PA1S_21415) | 4598620..4598859 | + | 240 | WP_033867399.1 | TIGR03758 family integrating conjugative element protein | - |
| PA1S_RS21415 (PA1S_21420) | 4598877..4599233 | + | 357 | WP_003109398.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PA1S_RS21420 (PA1S_21425) | 4599244..4599630 | + | 387 | WP_043487137.1 | TIGR03750 family conjugal transfer protein | - |
| PA1S_RS21425 (PA1S_21430) | 4599627..4600286 | + | 660 | WP_023518414.1 | TIGR03746 family integrating conjugative element protein | - |
| PA1S_RS21430 (PA1S_21435) | 4600283..4601167 | + | 885 | WP_043487135.1 | TIGR03749 family integrating conjugative element protein | - |
| PA1S_RS21435 (PA1S_21440) | 4601151..4602656 | + | 1506 | WP_023518412.1 | TIGR03752 family integrating conjugative element protein | - |
| PA1S_RS21440 (PA1S_21445) | 4602634..4603077 | + | 444 | WP_023518411.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PA1S_RS21445 (PA1S_21450) | 4603077..4606019 | + | 2943 | WP_023518410.1 | conjugative transfer ATPase | - |
| PA1S_RS21450 (PA1S_21455) | 4606016..4606300 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| PA1S_RS21455 (PA1S_21460) | 4606297..4606953 | + | 657 | WP_043487129.1 | DsbA family protein | - |
| PA1S_RS21460 (PA1S_21465) | 4606950..4607168 | - | 219 | WP_003158150.1 | hypothetical protein | - |
| PA1S_RS21465 (PA1S_21470) | 4607377..4607808 | + | 432 | WP_023518409.1 | TIGR03757 family integrating conjugative element protein | - |
| PA1S_RS21470 (PA1S_21475) | 4607808..4608746 | + | 939 | WP_023518408.1 | TIGR03756 family integrating conjugative element protein | - |
| PA1S_RS21475 (PA1S_21480) | 4608764..4610152 | + | 1389 | WP_043487126.1 | integrating conjugative element protein | - |
| PA1S_RS21480 (PA1S_21485) | 4610152..4610499 | + | 348 | WP_003117086.1 | hypothetical protein | - |
| PA1S_RS21485 (PA1S_21490) | 4610496..4612010 | + | 1515 | WP_023518406.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PA1S_RS21490 (PA1S_21495) | 4612478..4612750 | + | 273 | WP_023518405.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PA1S_RS21495 (PA1S_21500) | 4612754..4613104 | + | 351 | WP_023518404.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PA1S_RS21500 (PA1S_21505) | 4613488..4615200 | - | 1713 | WP_023518403.1 | ATP-dependent helicase | - |
| PA1S_RS21505 (PA1S_21510) | 4615197..4617068 | - | 1872 | WP_023518402.1 | AAA family ATPase | - |
| PA1S_RS21510 (PA1S_21515) | 4617420..4619339 | + | 1920 | WP_043487124.1 | helicase/relaxase domain-containing protein | - |
| PA1S_RS21515 (PA1S_21520) | 4619336..4620616 | + | 1281 | WP_053870620.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PA1S_RS21525 (PA1S_21530) | 4621121..4621795 | - | 675 | WP_003111415.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| PA1S_RS21530 (PA1S_21535) | 4621811..4622458 | - | 648 | WP_003112571.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| PA1S_RS21535 (PA1S_21540) | 4622678..4623502 | - | 825 | WP_003120698.1 | tol-pal system protein YbgF | - |
| PA1S_RS21540 (PA1S_21545) | 4623512..4624018 | - | 507 | WP_003111417.1 | peptidoglycan-associated lipoprotein Pal | - |
| PA1S_RS21545 (PA1S_21550) | 4624071..4625369 | - | 1299 | WP_003086128.1 | Tol-Pal system protein TolB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Pseudomonas aeruginosa PA1R | Integrative and Conjugative Element | TA30318 | NC_022806 | 5021959..5124759 | 0 | |
| Pseudomonas aeruginosa strain PA1RG | Integrative and Conjugative Element | TA56950 | NZ_CP012679 | 4518241..4621031 | 0 |