MGE detailed information
MGE type: Conjugative plasmid MGE length: 110040 bp
Accession: NC_022651 Location: 1..110040 Organism: Escherichia coli JJ1886 Replicon: plasmid pJJ1886_5
Accession: NC_022651 Location: 1..110040 Organism: Escherichia coli JJ1886 Replicon: plasmid pJJ1886_5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P423_RS26300 () | 31..1644 | - | 1614 | WP_000080195.1 | IS66-like element ISEc23 family transposase | - |
| P423_RS26305 () | 1675..2025 | - | 351 | WP_000624722.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| P423_RS26310 () | 2022..2447 | - | 426 | WP_000422741.1 | IS66 family insertion sequence hypothetical protein | - |
| P423_RS26315 () | 2509..3660 | + | 1152 | WP_031325939.1 | DUF3800 domain-containing protein | - |
| P423_RS26320 () | 3694..4206 | - | 513 | WP_000151784.1 | hypothetical protein | - |
| P423_RS26325 () | 4752..4970 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| P423_RS26330 () | 4972..5277 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| P423_RS26335 () | 5278..6084 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| P423_RS26340 () | 6858..7613 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| P423_RS26345 () | 8201..9367 | + | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| P423_RS26350 () | 9367..10338 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| P423_RS26355 () | 11136..12077 | + | 942 | WP_106426161.1 | DUF1281 domain-containing protein | - |
| P423_RS29675 () | 12110..12414 | + | 305 | Protein_12 | hypothetical protein | - |
| P423_RS26365 () | 12491..13174 | + | 684 | WP_000086185.1 | DNA methylase | - |
| P423_RS26370 () | 13175..13396 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| P423_RS26375 () | 13410..13844 | + | 435 | WP_000274437.1 | DUF1380 family protein | - |
| P423_RS30270 () | 13895..14671 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| P423_RS26385 () | 15211..15513 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| P423_RS26390 () | 15560..15982 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| P423_RS26395 () | 15979..16170 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| P423_RS26405 () | 17199..17429 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| P423_RS26410 () | 17481..18842 | + | 1362 | WP_000170728.1 | DUF3560 domain-containing protein | - |
| P423_RS26415 () | 18889..19452 | + | 564 | WP_012783964.1 | class I SAM-dependent methyltransferase | - |
| P423_RS26435 () | 20316..20843 | + | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| P423_RS26440 () | 20899..21132 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| P423_RS26445 () | 21191..23149 | + | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| P423_RS26450 () | 23204..23638 | + | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| P423_RS26455 () | 23635..24354 | + | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| P423_RS30375 () | 24366..24554 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 24366..24590 | + | 225 | NuclAT_0 | - | - |
| - () | 24366..24590 | + | 225 | NuclAT_0 | - | - |
| - () | 24366..24590 | + | 225 | NuclAT_0 | - | - |
| - () | 24366..24590 | + | 225 | NuclAT_0 | - | - |
| P423_RS26465 () | 24634..24792 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| P423_RS26470 () | 25143..25847 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| P423_RS26475 () | 25900..27795 | + | 1896 | Protein_31 | Tn3 family transposase | - |
| P423_RS26480 () | 27894..28547 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| P423_RS30290 () | 28640..28897 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| P423_RS26490 () | 28830..29231 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| P423_RS26495 () | 29368..31179 | - | 1812 | Protein_35 | Tn3-like element Tn5403 family transposase | - |
| P423_RS26500 () | 31250..31954 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| P423_RS27105 () | 32008..32448 | - | 441 | Protein_37 | CatB-related O-acetyltransferase | - |
| P423_RS26505 () | 32586..33416 | - | 831 | WP_001334766.1 | oxacillin-hydrolyzing class D beta-lactamase OXA-1 | - |
| P423_RS26510 () | 33547..34101 | - | 555 | WP_063840321.1 | fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5 | - |
| P423_RS26515 () | 34245..34949 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| P423_RS26520 () | 35219..35776 | + | 558 | WP_001235713.1 | recombinase family protein | - |
| P423_RS26525 () | 35959..36819 | + | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| P423_RS26530 () | 37845..38702 | - | 858 | WP_000130647.1 | incFII family plasmid replication initiator RepA | - |
| P423_RS26535 () | 38695..38769 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| P423_RS26540 () | 38994..39254 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| P423_RS26545 () | 39494..40084 | - | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| P423_RS26550 () | 40122..40331 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| P423_RS26555 () | 40377..40838 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| P423_RS26560 () | 41083..41295 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| P423_RS26565 () | 41424..41984 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| P423_RS26570 () | 42087..42947 | - | 861 | WP_000704523.1 | alpha/beta hydrolase | - |
| P423_RS26575 () | 43006..43752 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| P423_RS26580 () | 43772..47842 | - | 4071 | Protein_53 | conjugative transfer relaxase/helicase TraI | - |
| P423_RS26585 () | 47894..48598 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| P423_RS26590 () | 48662..49471 | - | 810 | Protein_55 | conjugal transfer protein TraH | - |
| P423_RS26595 () | 49458..49883 | - | 426 | WP_001448114.1 | F-type conjugal transfer protein TrbF | - |
| P423_RS26600 () | 49831..50172 | - | 342 | WP_001448115.1 | P-type conjugative transfer protein TrbJ | - |
| P423_RS26605 () | 50102..50647 | - | 546 | WP_000059824.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| P423_RS26610 () | 50634..50918 | - | 285 | WP_001448202.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| P423_RS26615 () | 51045..51383 | - | 339 | WP_001287905.1 | conjugal transfer protein TrbA | - |
| P423_RS26620 () | 51399..52142 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| P423_RS26625 () | 52135..52392 | - | 258 | WP_000864320.1 | conjugal transfer protein TrbE | - |
| P423_RS26630 () | 52419..54227 | - | 1809 | WP_000821863.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| P423_RS26635 () | 54224..54862 | - | 639 | WP_001080257.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| P423_RS26640 () | 54871..55176 | - | 306 | WP_000224411.1 | hypothetical protein | - |
| P423_RS26645 () | 55206..56198 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| P423_RS26650 () | 56195..56827 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| P423_RS26655 () | 56824..57210 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| P423_RS26660 () | 57207..59834 | - | 2628 | WP_001064239.1 | type IV secretion system protein TraC | - |
| P423_RS29040 () | 59994..60215 | - | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| P423_RS26670 () | 60350..60865 | - | 516 | WP_000809893.1 | type IV conjugative transfer system lipoprotein TraV | - |
| P423_RS26675 () | 60862..61113 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| P423_RS26680 () | 61106..61459 | - | 354 | WP_071528018.1 | conjugal transfer protein TrbD | - |
| P423_RS26685 () | 61413..61997 | - | 585 | WP_000002795.1 | conjugal transfer protein TraP | - |
| P423_RS26690 () | 61987..63414 | - | 1428 | WP_000146638.1 | conjugal transfer protein TraB | - |
| P423_RS26695 () | 63414..64118 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| P423_RS26700 () | 64129..64695 | - | 567 | WP_000399804.1 | type IV conjugative transfer system protein TraE | - |
| P423_RS26705 () | 64717..65028 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| P423_RS26710 () | 65033..65395 | - | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| P423_RS26715 () | 65429..65656 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| P423_RS26720 () | 65750..66436 | - | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| P423_RS26725 () | 66630..67013 | - | 384 | WP_001151564.1 | relaxosome protein TraM | - |
| P423_RS26730 () | 67299..67946 | + | 648 | WP_000614282.1 | transglycosylase SLT domain-containing protein | - |
| P423_RS26735 () | 68243..69064 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| P423_RS26740 () | 69185..69472 | - | 288 | WP_000107537.1 | hypothetical protein | - |
| P423_RS26745 () | 70164..70868 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| P423_RS26750 () | 71094..71909 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| P423_RS26755 () | 72256..74142 | + | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| P423_RS26760 () | 74183..74710 | + | 528 | WP_000178050.1 | iron transporter | - |
| P423_RS26765 () | 74814..76193 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| P423_RS26770 () | 76196..77479 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| P423_RS26775 () | 77469..78599 | + | 1131 | WP_000729220.1 | ABC transporter permease | - |
| P423_RS26780 () | 78604..79299 | + | 696 | WP_000117262.1 | ABC transporter ATP-binding protein | - |
| P423_RS26785 () | 79286..79771 | + | 486 | WP_001267177.1 | TlpA family protein disulfide reductase | - |
| P423_RS26790 () | 79796..80281 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| P423_RS26795 () | 80403..80933 | + | 531 | Protein_96 | histidine-type phosphatase | - |
| P423_RS26800 () | 80991..81695 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| P423_RS29070 () | 81720..82916 | + | 1197 | Protein_98 | IS3 family transposase | - |
| P423_RS26820 () | 82938..83171 | + | 234 | Protein_99 | Tn3 family transposase | - |
| P423_RS26825 () | 83248..83556 | + | 309 | Protein_100 | IS4 family transposase | - |
| P423_RS26830 () | 83615..84925 | - | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| P423_RS26835 () | 84918..85991 | - | 1074 | WP_000950177.1 | ABC transporter ATP-binding protein | - |
| P423_RS26840 () | 85997..86821 | - | 825 | WP_000922702.1 | phosphodiesterase | - |
| P423_RS26845 () | 86832..87719 | - | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| P423_RS26850 () | 87709..88587 | - | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| P423_RS26855 () | 88718..89158 | - | 441 | Protein_106 | zinc-binding dehydrogenase | - |
| P423_RS26865 () | 89559..90449 | + | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| P423_RS26870 () | 90474..90854 | + | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| P423_RS26875 () | 90887..91852 | + | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| P423_RS26880 () | 91898..92650 | - | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| P423_RS26885 () | 93255..93539 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| P423_RS26890 () | 93539..93814 | + | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P423_RS26895 () | 93920..94213 | + | 294 | WP_001105060.1 | hypothetical protein | - |
| P423_RS30310 () | 94248..94376 | - | 129 | Protein_114 | IS481 family transposase | - |
| P423_RS26900 () | 94409..95578 | - | 1170 | WP_001072355.1 | hypothetical protein | - |
| P423_RS26910 () | 96071..96378 | + | 308 | Protein_116 | type II toxin-antitoxin system ParD family antitoxin | - |
| P423_RS26920 () | 96667..97364 | + | 698 | Protein_117 | IS1 family transposase | - |
| P423_RS26930 () | 97618..98640 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| P423_RS26935 () | 98625..100196 | - | 1572 | WP_023363369.1 | AAA family ATPase | - |
| P423_RS26940 () | 100271..100687 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| P423_RS26945 () | 100684..100914 | - | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| P423_RS26950 () | 101295..105089 | + | 3795 | WP_001144732.1 | hypothetical protein | - |
| P423_RS26955 () | 105134..105550 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| P423_RS26960 () | 105547..105777 | - | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| P423_RS26965 () | 106042..106542 | + | 501 | WP_000528932.1 | hypothetical protein | - |
| P423_RS26970 () | 106555..107328 | + | 774 | WP_000905949.1 | hypothetical protein | - |
| P423_RS26975 () | 107539..109152 | - | 1614 | WP_000080195.1 | IS66-like element ISEc23 family transposase | - |
| P423_RS26980 () | 109183..109533 | - | 351 | WP_000624722.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| P423_RS26985 () | 109530..109955 | - | 426 | WP_000422741.1 | IS66 family insertion sequence hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|