MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 122863 bp
Accession: NC_021819 Location: 1..122863 Organism: Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 Replicon: plasmid unnamed
Accession: NC_021819 Location: 1..122863 Organism: Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFSAN002050_RS25040 () | 35..529 | - | 495 | WP_020833780.1 | trypsin-like serine protease | - |
| CFSAN002050_RS25045 () | 574..879 | - | 306 | WP_020833781.1 | hypothetical protein | - |
| CFSAN002050_RS25055 () | 1364..1639 | - | 276 | WP_020833783.1 | hypothetical protein | - |
| CFSAN002050_RS25060 () | 1780..1977 | - | 198 | WP_001371914.1 | hypothetical protein | - |
| CFSAN002050_RS25075 () | 2965..3222 | - | 258 | WP_020833785.1 | hypothetical protein | - |
| CFSAN002050_RS25080 () | 3657..4553 | - | 897 | WP_024143017.1 | hypothetical protein | - |
| CFSAN002050_RS25085 () | 4556..5071 | - | 516 | WP_001572389.1 | thermonuclease family protein | - |
| CFSAN002050_RS25090 () | 5286..6713 | + | 1428 | WP_000833380.1 | DNA cytosine methyltransferase | - |
| CFSAN002050_RS28260 () | 6774..6941 | + | 168 | WP_000220758.1 | hypothetical protein | - |
| CFSAN002050_RS25100 () | 6964..8283 | + | 1320 | WP_020833787.1 | DUF1173 family protein | - |
| CFSAN002050_RS25105 () | 8296..8499 | + | 204 | WP_000121164.1 | hypothetical protein | - |
| CFSAN002050_RS25110 () | 8563..9768 | - | 1206 | WP_001371952.1 | hypothetical protein | - |
| CFSAN002050_RS25115 () | 9765..10583 | - | 819 | WP_000193208.1 | DUF4942 domain-containing protein | - |
| CFSAN002050_RS28265 () | 10791..10958 | + | 168 | WP_001572379.1 | hypothetical protein | - |
| CFSAN002050_RS25120 () | 11052..11324 | - | 273 | WP_000019951.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| CFSAN002050_RS25125 () | 11447..12562 | + | 1116 | WP_001572377.1 | nickel/cobalt efflux protein RcnA | - |
| CFSAN002050_RS25130 () | 12820..13254 | - | 435 | WP_000723070.1 | hypothetical protein | - |
| CFSAN002050_RS25135 () | 13472..14818 | - | 1347 | WP_001572376.1 | copper resistance membrane spanning protein PcoS | - |
| CFSAN002050_RS25140 () | 14857..15825 | + | 969 | WP_072196614.1 | IS5 family transposase IS903B | Transposase |
| CFSAN002050_RS25145 () | 16014..17633 | + | 1620 | WP_001572373.1 | Phosphoethanolamine transferase EptA | VF |
| CFSAN002050_RS25150 () | 17710..18186 | + | 477 | WP_001572372.1 | WbuC family cupin fold metalloprotein | - |
| CFSAN002050_RS25155 () | 18399..19748 | - | 1350 | WP_001572371.1 | sensor histidine kinase QseC-like | - |
| CFSAN002050_RS25160 () | 19724..20392 | - | 669 | WP_001572368.1 | Transcriptional regulatory protein QseB | VF |
| CFSAN002050_RS25165 () | 20586..21611 | - | 1026 | WP_077909719.1 | ExeA family protein | - |
| CFSAN002050_RS25170 () | 21544..22452 | - | 909 | Protein_24 | IS481 family transposase ISAzs36 | Transposase |
| CFSAN002050_RS25175 () | 22504..23208 | - | 705 | WP_001572363.1 | IS6 family transposase IS26 | Transposase |
| CFSAN002050_RS25180 () | 23362..24384 | + | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| CFSAN002050_RS25185 () | 25430..25759 | + | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CFSAN002050_RS25190 () | 25740..26021 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| CFSAN002050_RS25195 () | 26299..27279 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| CFSAN002050_RS25200 () | 27683..28435 | - | 753 | WP_011784790.1 | VIT1/CCC1 transporter family protein | - |
| CFSAN002050_RS25205 () | 28511..30727 | - | 2217 | WP_020833790.1 | PepSY domain-containing protein | - |
| CFSAN002050_RS25210 () | 30750..31223 | - | 474 | WP_019677799.1 | DUF2271 domain-containing protein | - |
| CFSAN002050_RS25215 () | 31278..31658 | - | 381 | WP_020833791.1 | PepSY domain-containing protein | - |
| CFSAN002050_RS25220 () | 31735..33051 | - | 1317 | WP_020833792.1 | ferric reductase-like transmembrane domain-containing protein | - |
| CFSAN002050_RS25225 () | 33220..33885 | + | 666 | WP_020833793.1 | Transcriptional regulatory protein QseB | VF |
| CFSAN002050_RS25230 () | 33875..35200 | + | 1326 | WP_011786649.1 | sensor histidine kinase N-terminal domain-containing protein | - |
| CFSAN002050_RS25235 () | 35191..36330 | + | 1140 | WP_020833794.1 | Regulatory protein PchR | VF |
| CFSAN002050_RS25240 () | 36547..37128 | + | 582 | WP_020833795.1 | hypothetical protein | - |
| CFSAN002050_RS27330 () | 37237..37365 | - | 129 | WP_077909722.1 | MipA/OmpV family protein | - |
| CFSAN002050_RS25245 () | 37415..38839 | + | 1425 | Protein_40 | IS1634 family transposase ISShes12 | Transposase |
| CFSAN002050_RS25250 () | 39059..39877 | + | 819 | WP_020833797.1 | Phosphate-import ATP-binding protein PhnC | VF |
| CFSAN002050_RS25255 () | 39874..40737 | + | 864 | WP_011784780.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| CFSAN002050_RS25260 () | 40748..41578 | + | 831 | WP_020833798.1 | phosphonate ABC transporter, permease protein PhnE | - |
| CFSAN002050_RS25265 () | 41588..42598 | + | 1011 | WP_011783502.1 | 2-hydroxyacid dehydrogenase | - |
| CFSAN002050_RS25270 () | 42592..43452 | + | 861 | WP_011783503.1 | LysR family transcriptional regulator | - |
| CFSAN002050_RS27335 () | 43367..44059 | - | 693 | WP_071882548.1 | reverse transcriptase | - |
| CFSAN002050_RS25275 () | 44812..45567 | - | 756 | WP_020833799.1 | IS21-like element helper ATPase IstB | - |
| CFSAN002050_RS25280 () | 45580..47121 | - | 1542 | WP_042846898.1 | IS21 family transposase ISAs29 | Transposase |
| CFSAN002050_RS25290 () | 47756..48658 | - | 903 | WP_020833802.1 | WYL domain-containing protein | - |
| CFSAN002050_RS25295 () | 48822..50420 | - | 1599 | WP_020833803.1 | hypothetical protein | - |
| CFSAN002050_RS27340 () | 50420..50914 | - | 495 | WP_071685143.1 | hypothetical protein | - |
| CFSAN002050_RS25300 () | 51084..51290 | - | 207 | WP_000134171.1 | hypothetical protein | - |
| CFSAN002050_RS25305 () | 51351..52676 | - | 1326 | WP_020833804.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| CFSAN002050_RS25310 () | 52681..52974 | - | 294 | WP_024143021.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| CFSAN002050_RS25315 () | 53375..54727 | - | 1353 | WP_049827791.1 | hypothetical protein | - |
| CFSAN002050_RS25325 () | 54809..56049 | + | 1241 | Protein_56 | IS3 family transposase ISEc25 | Transposase |
| CFSAN002050_RS25330 () | 56169..56456 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CFSAN002050_RS25335 () | 56456..56695 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CFSAN002050_RS25340 () | 56958..57881 | - | 924 | WP_000167917.1 | cation diffusion facilitator family transporter | - |
| CFSAN002050_RS25345 () | 58081..58653 | - | 573 | WP_001515348.1 | cytochrome b/b6 domain-containing protein | - |
| CFSAN002050_RS25350 () | 59129..60367 | - | 1239 | WP_003030308.1 | IS110 family transposase ISCps4 | Transposase |
| CFSAN002050_RS25355 () | 60747..61769 | + | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| CFSAN002050_RS27355 () | 62060..62428 | + | 369 | Protein_63 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| CFSAN002050_RS27365 () | 62752..63456 | - | 705 | Protein_64 | IS6-like element IS26 family transposase | - |
| CFSAN002050_RS25375 () | 63685..64818 | - | 1134 | WP_024143024.1 | AraC family transcriptional regulator | - |
| CFSAN002050_RS25380 () | 65047..65653 | + | 607 | Protein_66 | hypothetical protein | - |
| CFSAN002050_RS25385 () | 65989..66420 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| CFSAN002050_RS25390 () | 66564..66914 | + | 351 | WP_000694954.1 | DUF305 domain-containing protein | - |
| CFSAN002050_RS25395 () | 67081..68907 | - | 1827 | WP_004118028.1 | AAA family ATPase | - |
| CFSAN002050_RS25400 () | 69470..69769 | - | 300 | WP_001097217.1 | helix-turn-helix transcriptional regulator | - |
| CFSAN002050_RS25405 () | 70132..71058 | - | 927 | WP_000262426.1 | hypothetical protein | - |
| CFSAN002050_RS27375 () | 71070..72626 | - | 1557 | WP_024143025.1 | TnsD family Tn7-like transposition protein | - |
| CFSAN002050_RS25410 () | 72668..74116 | - | 1449 | WP_001049182.1 | ATP-binding protein | - |
| CFSAN002050_RS25415 () | 74116..76239 | - | 2124 | WP_000351431.1 | transposase | - |
| CFSAN002050_RS25420 () | 76226..77068 | - | 843 | WP_020833813.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| CFSAN002050_RS25425 () | 77819..78199 | + | 381 | WP_049827792.1 | hypothetical protein | - |
| CFSAN002050_RS25430 () | 78257..78922 | + | 666 | WP_020833815.1 | hypothetical protein | - |
| CFSAN002050_RS25435 () | 78982..79437 | + | 456 | WP_020833816.1 | hypothetical protein | - |
| CFSAN002050_RS27380 () | 79479..79715 | + | 237 | WP_024143026.1 | hypothetical protein | - |
| CFSAN002050_RS25440 () | 79741..80034 | + | 294 | WP_024143027.1 | hypothetical protein | - |
| CFSAN002050_RS25445 () | 80212..80616 | + | 405 | WP_020833818.1 | H-NS histone family protein | - |
| CFSAN002050_RS25450 () | 80902..81942 | + | 1041 | WP_020833819.1 | IS481 family transposase ISErsp1 | Transposase |
| CFSAN002050_RS25460 () | 82431..83288 | - | 858 | WP_020833820.1 | HNH endonuclease | - |
| CFSAN002050_RS25465 () | 83304..83612 | - | 309 | WP_001224686.1 | hypothetical protein | - |
| CFSAN002050_RS25470 () | 84160..84585 | - | 426 | WP_020833821.1 | hypothetical protein | - |
| CFSAN002050_RS25475 () | 84837..85652 | - | 816 | WP_024143028.1 | HNH endonuclease | - |
| CFSAN002050_RS25480 () | 85665..86075 | - | 411 | WP_000985911.1 | hypothetical protein | - |
| CFSAN002050_RS25485 () | 86177..86383 | - | 207 | WP_000134171.1 | hypothetical protein | - |
| CFSAN002050_RS25490 () | 86444..87769 | - | 1326 | WP_020833823.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| CFSAN002050_RS25495 () | 87774..88067 | - | 294 | WP_024143029.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| CFSAN002050_RS25500 () | 88470..89858 | - | 1389 | WP_008786875.1 | hypothetical protein | - |
| CFSAN002050_RS25505 () | 89863..90360 | - | 498 | WP_008786874.1 | membrane protein | - |
| CFSAN002050_RS25510 () | 90562..91209 | - | 648 | WP_008786873.1 | hypothetical protein | - |
| CFSAN002050_RS25515 () | 92165..92557 | - | 393 | WP_020833826.1 | hypothetical protein | - |
| CFSAN002050_RS25520 () | 92930..93271 | + | 342 | WP_001151575.1 | hypothetical protein | - |
| CFSAN002050_RS25525 () | 93363..93554 | + | 192 | WP_008786869.1 | hypothetical protein | - |
| CFSAN002050_RS25530 () | 93604..93885 | + | 282 | WP_000077926.1 | hypothetical protein | - |
| CFSAN002050_RS25535 () | 94004..94210 | - | 207 | WP_020833827.1 | hypothetical protein | - |
| CFSAN002050_RS25540 () | 94448..95689 | - | 1242 | WP_020833829.1 | VWA domain-containing protein | - |
| CFSAN002050_RS25545 () | 96117..96692 | - | 576 | WP_000301247.1 | TerD family protein | - |
| CFSAN002050_RS25550 () | 96761..97339 | - | 579 | WP_000116680.1 | tellurium resistance membrane protein TerD | - |
| CFSAN002050_RS25555 () | 97388..98428 | - | 1041 | WP_000255079.1 | tellurium resistance membrane protein TerC | - |
| CFSAN002050_RS25560 () | 98451..98906 | - | 456 | WP_000007449.1 | tellurite resistance TerB family protein | - |
| CFSAN002050_RS25565 () | 98929..100086 | - | 1158 | WP_001054786.1 | TerD family protein | - |
| CFSAN002050_RS25570 () | 100086..100667 | - | 582 | WP_000254136.1 | tellurium resistance TerZ family protein | - |
| CFSAN002050_RS25575 () | 100990..102048 | + | 1059 | WP_008786866.1 | ATP-grasp domain-containing protein | - |
| CFSAN002050_RS25580 () | 102058..103200 | + | 1143 | WP_008786865.1 | phosphoribosyltransferase domain-containing protein | - |
| CFSAN002050_RS28145 () | 103193..103966 | + | 774 | WP_008786864.1 | hypothetical protein | - |
| CFSAN002050_RS25590 () | 103968..105047 | + | 1080 | WP_020833830.1 | cysteine protease StiP family protein | - |
| CFSAN002050_RS25595 () | 105047..106003 | + | 957 | WP_008786862.1 | HpcH/HpaI aldolase/citrate lyase family protein | - |
| CFSAN002050_RS25600 () | 106014..107222 | + | 1209 | WP_008786861.1 | DUF4236 domain-containing protein | - |
| CFSAN002050_RS25605 () | 107240..107707 | + | 468 | WP_001176768.1 | tellurium resistance protein TerW | - |
| CFSAN002050_RS25610 () | 108171..108809 | + | 639 | WP_001253657.1 | VWA domain-containing protein | - |
| CFSAN002050_RS25615 () | 108832..109473 | + | 642 | WP_000116681.1 | TerD family protein | - |
| CFSAN002050_RS25620 () | 109473..110111 | + | 639 | WP_001253658.1 | VWA domain-containing protein | - |
| CFSAN002050_RS25625 () | 110197..111237 | + | 1041 | WP_008786860.1 | VWA domain-containing protein | - |
| CFSAN002050_RS25630 () | 111237..112874 | + | 1638 | WP_008786859.1 | protein phosphatase 2C domain-containing protein | - |
| CFSAN002050_RS25635 () | 112900..114399 | + | 1500 | WP_001284315.1 | kinase | - |
| CFSAN002050_RS25640 () | 114565..115647 | - | 1083 | WP_020833832.1 | hypothetical protein | - |
| CFSAN002050_RS25645 () | 116008..116220 | - | 213 | WP_001285422.1 | hypothetical protein | - |
| CFSAN002050_RS25650 () | 116391..117566 | + | 1176 | WP_020833833.1 | tyrosine-type recombinase/integrase | - |
| CFSAN002050_RS28270 () | 117588..117791 | - | 204 | WP_001424615.1 | hypothetical protein | - |
| CFSAN002050_RS25660 () | 117868..118773 | - | 906 | WP_020833835.1 | hypothetical protein | - |
| CFSAN002050_RS25665 () | 118783..119745 | - | 963 | WP_000119428.1 | hypothetical protein | - |
| CFSAN002050_RS25670 () | 119836..120219 | - | 384 | WP_001424628.1 | hypothetical protein | - |
| CFSAN002050_RS25675 () | 120299..120835 | - | 537 | WP_020833836.1 | hypothetical protein | - |
| CFSAN002050_RS25680 () | 120909..121166 | - | 258 | WP_001371933.1 | hypothetical protein | - |
| CFSAN002050_RS25685 () | 121174..121764 | - | 591 | WP_000578892.1 | hypothetical protein | - |
| CFSAN002050_RS25690 () | 121809..122084 | - | 276 | WP_001004201.1 | hypothetical protein | - |
| CFSAN002050_RS27395 () | 122348..122863 | - | 516 | Protein_130 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|