MGE detailed information
MGE type: Genomic_island MGE length: 64576 bp
Accession: NC_019955 Location: 1848183..1912758 Organism: Vibrio parahaemolyticus BB22OP Replicon: chromosome
Accession: NC_019955 Location: 1848183..1912758 Organism: Vibrio parahaemolyticus BB22OP Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VPBB_RS08300 () | 1843889..1845232 | + | 1344 | WP_005500353.1 | glutamine synthetase family protein | - |
| VPBB_RS08305 () | 1845251..1846726 | + | 1476 | WP_015296871.1 | symporter in putrescine utilization cluster | - |
| VPBB_RS08310 () | 1846817..1847278 | - | 462 | WP_005500350.1 | hypothetical protein | - |
| VPBB_RS08315 () | 1847621..1848067 | + | 447 | WP_005500348.1 | DUF3291 domain-containing protein | - |
| VPBB_RS08320 () | 1848183..1848545 | + | 363 | WP_015296872.1 | VOC family protein | - |
| VPBB_RS08325 () | 1848708..1849253 | + | 546 | Protein_1620 | GNAT family N-acetyltransferase | - |
| VPBB_RS08330 () | 1849281..1849907 | + | 627 | WP_015296873.1 | Leucine efflux protein | VF |
| VPBB_RS25905 () | 1850075..1850998 | - | 924 | Protein_1622 | IS1595 family transposase | - |
| VPBB_RS08340 () | 1851784..1852278 | - | 495 | WP_017448876.1 | hypothetical protein | - |
| VPBB_RS08345 () | 1852382..1853302 | - | 921 | Protein_1624 | IS5 family transposase ISVbsp3 | Transposase |
| VPBB_RS08350 () | 1853353..1853748 | - | 396 | WP_015296874.1 | hypothetical protein | - |
| VPBB_RS08355 () | 1853913..1854326 | - | 414 | WP_015296875.1 | VOC family protein | - |
| VPBB_RS08365 () | 1855472..1856323 | - | 852 | WP_015296877.1 | nucleotide-binding protein | - |
| VPBB_RS23710 () | 1856364..1856522 | - | 159 | WP_072829181.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08370 () | 1856506..1857030 | - | 525 | WP_011080331.1 | GNAT family N-acetyltransferase | - |
| VPBB_RS23255 () | 1857130..1857759 | - | 630 | WP_015296879.1 | GIY-YIG nuclease family protein | - |
| VPBB_RS08380 () | 1857831..1858331 | - | 501 | WP_015296880.1 | DUF1311 domain-containing protein | - |
| VPBB_RS23720 () | 1858361..1858453 | - | 93 | WP_072859084.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08385 () | 1858479..1858850 | - | 372 | WP_015296881.1 | hypothetical protein | - |
| VPBB_RS08390 () | 1859014..1859610 | - | 597 | WP_015296882.1 | class I SAM-dependent methyltransferase | - |
| VPBB_RS23725 () | 1859648..1859740 | - | 93 | WP_072886081.1 | DUF3265 domain-containing protein | - |
| VPBB_RS23730 () | 1860103..1860192 | - | 90 | WP_079740852.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08405 () | 1860829..1861317 | - | 489 | WP_020840814.1 | hypothetical protein | - |
| VPBB_RS23740 () | 1861837..1861929 | - | 93 | WP_079771126.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08410 () | 1861953..1863461 | - | 1509 | WP_015296885.1 | ATP-binding protein | - |
| VPBB_RS23745 () | 1863627..1863698 | - | 72 | WP_078511467.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08415 () | 1863713..1864261 | - | 549 | WP_015296886.1 | hypothetical protein | - |
| VPBB_RS23750 () | 1864307..1864417 | - | 111 | WP_140362832.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08420 () | 1864414..1865178 | - | 765 | WP_015296887.1 | hypothetical protein | - |
| VPBB_RS23755 () | 1865221..1865347 | - | 127 | Protein_1644 | DUF3265 domain-containing protein | - |
| VPBB_RS08425 () | 1865422..1865664 | + | 243 | WP_015296888.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VPBB_RS08430 () | 1865672..1865971 | + | 300 | WP_015296889.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VPBB_RS23760 () | 1866523..1866663 | - | 141 | WP_072612514.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08435 () | 1866641..1866925 | - | 285 | WP_013571627.1 | nucleotide pyrophosphohydrolase | - |
| VPBB_RS08440 () | 1867082..1867519 | - | 438 | WP_029826846.1 | GIY-YIG nuclease family protein | - |
| VPBB_RS23765 () | 1867545..1867703 | - | 159 | WP_079757879.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08445 () | 1867652..1868089 | - | 438 | WP_029826865.1 | hypothetical protein | - |
| VPBB_RS23770 () | 1868122..1868214 | - | 93 | WP_072829098.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08450 () | 1868240..1868524 | - | 285 | WP_015296893.1 | hypothetical protein | - |
| VPBB_RS25910 () | 1868569..1868658 | - | 90 | WP_072847691.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08455 () | 1868789..1869019 | + | 231 | WP_015296894.1 | DUF2188 domain-containing protein | - |
| VPBB_RS25785 () | 1869085..1869252 | - | 168 | WP_140362829.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08465 () | 1869634..1869993 | - | 360 | WP_029826751.1 | hypothetical protein | - |
| VPBB_RS25915 () | 1870020..1870109 | - | 90 | WP_072832911.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08470 () | 1870663..1871184 | - | 522 | WP_015296898.1 | GNAT family N-acetyltransferase | - |
| VPBB_RS23795 () | 1871204..1871293 | - | 90 | WP_072829103.1 | hypothetical protein | - |
| VPBB_RS08475 () | 1871322..1871714 | - | 393 | WP_015296899.1 | nuclear transport factor 2 family protein | - |
| VPBB_RS23800 () | 1871743..1871832 | - | 90 | WP_072829120.1 | DUF3265 domain-containing protein | - |
| VPBB_RS25715 () | 1871961..1872320 | + | 360 | WP_154218374.1 | hypothetical protein | - |
| VPBB_RS23805 () | 1872353..1872508 | - | 156 | WP_079757872.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08485 () | 1872498..1872803 | - | 306 | WP_025787418.1 | hypothetical protein | - |
| VPBB_RS23810 () | 1872875..1872991 | - | 117 | WP_140362817.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08490 () | 1872982..1873878 | - | 897 | WP_015296901.1 | hypothetical protein | - |
| VPBB_RS23815 () | 1873911..1874020 | - | 110 | Protein_1668 | DUF3265 domain-containing protein | - |
| VPBB_RS08495 () | 1874025..1874522 | - | 498 | WP_029826770.1 | hypothetical protein | - |
| VPBB_RS23820 () | 1874534..1874671 | - | 138 | WP_140362818.1 | DUF3265 domain-containing protein | - |
| VPBB_RS23825 () | 1875039..1875131 | - | 93 | WP_072847706.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08505 () | 1875159..1875446 | - | 288 | WP_015296903.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VPBB_RS08510 () | 1875443..1875724 | - | 282 | WP_000086647.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VPBB_RS08515 () | 1875924..1876508 | - | 585 | WP_025787257.1 | hypothetical protein | - |
| VPBB_RS23830 () | 1876535..1876666 | - | 132 | WP_079757871.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08520 () | 1877769..1878071 | - | 303 | WP_015296906.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VPBB_RS08525 () | 1878059..1878316 | - | 258 | WP_015296907.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VPBB_RS08530 () | 1878507..1879139 | - | 633 | WP_029826615.1 | peptidase M15 | - |
| VPBB_RS08535 () | 1879307..1879762 | - | 456 | WP_029826614.1 | GNAT family N-acetyltransferase | - |
| VPBB_RS23840 () | 1879772..1879891 | - | 120 | WP_071652258.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08540 () | 1879878..1880360 | - | 483 | WP_015296910.1 | hypothetical protein | - |
| VPBB_RS08545 () | 1880522..1881586 | - | 1065 | WP_015296911.1 | hypothetical protein | - |
| VPBB_RS23845 () | 1881615..1881704 | - | 90 | WP_072829136.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08550 () | 1881722..1882147 | - | 426 | WP_029826613.1 | putative N-acetyltransferase YjaB | VF |
| VPBB_RS23850 () | 1882195..1882284 | - | 90 | WP_072829140.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08555 () | 1882366..1882656 | - | 291 | WP_025787412.1 | TM2 domain-containing protein | - |
| VPBB_RS23855 () | 1882802..1882933 | - | 132 | WP_079757880.1 | DUF3265 domain-containing protein | - |
| VPBB_RS25795 () | 1883013..1883192 | - | 180 | WP_041170545.1 | hypothetical protein | - |
| VPBB_RS23865 () | 1883423..1883515 | - | 93 | WP_072829134.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08565 () | 1883560..1884501 | - | 942 | Protein_1690 | D-2-hydroxyacid dehydrogenase family protein | - |
| VPBB_RS24775 () | 1884553..1885404 | - | 852 | WP_015296915.1 | IS3 family transposase ISDpr3 | Transposase |
| VPBB_RS08575 () | 1885488..1885709 | - | 222 | Protein_1692 | IS3 family transposase ISNisp1 | Transposase |
| VPBB_RS08580 () | 1885898..1886656 | - | 759 | WP_015296917.1 | hypothetical protein | - |
| VPBB_RS08585 () | 1887052..1887693 | - | 642 | WP_015296919.1 | hypothetical protein | - |
| VPBB_RS23875 () | 1887725..1887817 | - | 93 | WP_017821981.1 | DUF3265 domain-containing protein | - |
| VPBB_RS23880 () | 1888272..1888397 | - | 126 | WP_079757877.1 | DUF3265 domain-containing protein | - |
| VPBB_RS23885 () | 1888728..1888886 | - | 159 | WP_072829181.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08590 () | 1888870..1889394 | - | 525 | WP_011080331.1 | GNAT family N-acetyltransferase | - |
| VPBB_RS08595 () | 1890002..1890688 | - | 687 | WP_015296920.1 | Pyrimidine 5'-nucleotidase YjjG | VF |
| VPBB_RS23895 () | 1890698..1890811 | - | 114 | WP_072829147.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08600 () | 1890804..1891520 | - | 717 | WP_015296921.1 | hypothetical protein | - |
| VPBB_RS23900 () | 1891559..1891651 | - | 93 | WP_072829150.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08615 () | 1892783..1893220 | - | 438 | WP_029826736.1 | hypothetical protein | - |
| VPBB_RS08620 () | 1893391..1893732 | - | 342 | WP_029826738.1 | hypothetical protein | - |
| VPBB_RS23905 () | 1894385..1894474 | - | 90 | WP_072829120.1 | DUF3265 domain-containing protein | - |
| VPBB_RS25725 () | 1894603..1894962 | + | 360 | WP_154218374.1 | hypothetical protein | - |
| VPBB_RS23910 () | 1895484..1895630 | - | 147 | WP_072829176.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08635 () | 1895591..1895944 | - | 354 | WP_015296924.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| VPBB_RS23915 () | 1895973..1896065 | - | 93 | WP_004748931.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08640 () | 1896091..1896606 | - | 516 | WP_029849319.1 | hypothetical protein | - |
| VPBB_RS08645 () | 1896803..1897051 | + | 249 | WP_005377003.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VPBB_RS08650 () | 1897041..1897331 | + | 291 | WP_005377002.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VPBB_RS23920 () | 1897350..1897460 | - | 111 | WP_071816346.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08655 () | 1897463..1898242 | - | 780 | WP_015296925.1 | HK97 family phage prohead protease | - |
| VPBB_RS08660 () | 1898384..1899355 | - | 972 | Protein_1715 | phosphotransferase | - |
| VPBB_RS08665 () | 1899498..1899956 | - | 459 | WP_029849324.1 | hypothetical protein | - |
| VPBB_RS23925 () | 1899985..1900074 | - | 90 | WP_072829120.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08670 () | 1900762..1901010 | + | 249 | WP_005377003.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VPBB_RS08675 () | 1901000..1901290 | + | 291 | WP_005377002.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VPBB_RS08680 () | 1901422..1901874 | - | 453 | WP_015296928.1 | hypothetical protein | - |
| VPBB_RS23930 () | 1901901..1901993 | - | 93 | WP_072859724.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08685 () | 1902018..1902398 | - | 381 | WP_021485144.1 | energy transducer TonB | - |
| VPBB_RS23935 () | 1902428..1902520 | - | 93 | WP_072829169.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08690 () | 1902545..1902934 | - | 390 | WP_029849325.1 | hypothetical protein | - |
| VPBB_RS25920 () | 1902971..1903060 | - | 90 | WP_072829161.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08695 () | 1903078..1903431 | - | 354 | WP_015296924.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| VPBB_RS08700 () | 1904057..1904680 | - | 624 | WP_015296930.1 | hypothetical protein | - |
| VPBB_RS23945 () | 1904787..1904879 | - | 93 | WP_005377014.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08705 () | 1905516..1906337 | - | 822 | WP_015296932.1 | hypothetical protein | - |
| VPBB_RS23955 () | 1906399..1906491 | - | 93 | WP_072828804.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08710 () | 1906512..1907147 | - | 636 | WP_015296934.1 | AbiV family abortive infection protein | - |
| VPBB_RS23960 () | 1907176..1907268 | - | 93 | WP_072828806.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08715 () | 1907845..1908249 | - | 405 | WP_023623385.1 | DUF1801 domain-containing protein | - |
| VPBB_RS08720 () | 1908387..1908725 | - | 339 | WP_139137791.1 | hypothetical protein | - |
| VPBB_RS08725 () | 1909006..1909383 | - | 378 | WP_029807319.1 | hypothetical protein | - |
| VPBB_RS23965 () | 1909380..1909520 | - | 141 | WP_072828809.1 | DUF3265 domain-containing protein | - |
| VPBB_RS08730 () | 1910085..1911047 | + | 963 | WP_029826230.1 | IS91 family transposase ISWz1 | Transposase |
| VPBB_RS08735 () | 1911098..1911571 | - | 474 | WP_005458833.1 | DUF2947 domain-containing protein | - |
| VPBB_RS08740 () | 1911585..1912172 | - | 588 | WP_015296938.1 | HD domain-containing protein | - |
| VPBB_RS08745 () | 1912174..1912758 | - | 585 | WP_005458831.1 | ribosomal protein S5-alanine N-acetyltransferase | - |
| VPBB_RS08750 () | 1912795..1914339 | - | 1545 | WP_005494791.1 | transcriptional regulator TyrR | - |
| VPBB_RS08755 () | 1914440..1915480 | - | 1041 | WP_015296939.1 | YcjF family protein | - |
| VPBB_RS08760 () | 1915477..1916853 | - | 1377 | WP_015296940.1 | YcjX family protein | - |
| VPBB_RS08765 () | 1917065..1917250 | - | 186 | WP_005458825.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|