MGE detailed information
MGE type: Prophage MGE length: 99650 bp
Accession: NC_017906 Location: 2107725..2207374 Organism: Escherichia coli Xuzhou21 Replicon: chromosome
Accession: NC_017906 Location: 2107725..2207374 Organism: Escherichia coli Xuzhou21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDCO157_RS10775 () | 2104239..2104985 | + | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| CDCO157_RS10780 () | 2105074..2105760 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| CDCO157_RS10785 () | 2105937..2106140 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CDCO157_RS10790 () | 2106176..2107636 | - | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| CDCO157_RS10795 () | 2107725..2109008 | - | 1284 | Protein_2039 | MHS family MFS transporter YdfJ | - |
| CDCO157_RS10800 () | 2109140..2109382 | + | 243 | WP_001120551.1 | DinI-like family protein | - |
| CDCO157_RS10805 () | 2109544..2110185 | - | 642 | WP_001143808.1 | hypothetical protein | VF |
| CDCO157_RS31185 () | 2110267..2110896 | - | 630 | WP_001356599.1 | hypothetical protein | VF |
| CDCO157_RS10815 () | 2110969..2111544 | - | 576 | WP_001131658.1 | hypothetical protein | VF |
| CDCO157_RS10820 () | 2111658..2111927 | - | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| CDCO157_RS10830 () | 2111929..2113150 | - | 1222 | Protein_2045 | prophage tail fiber N-terminal domain-containing protein | - |
| CDCO157_RS10835 () | 2113215..2113814 | - | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| CDCO157_RS10840 () | 2113882..2117361 | - | 3480 | WP_000514945.1 | host specificity protein J | - |
| CDCO157_RS10845 () | 2117602..2118231 | - | 630 | WP_072147834.1 | tail assembly protein | - |
| CDCO157_RS10850 () | 2118177..2118920 | - | 744 | WP_000194798.1 | C40 family peptidase | - |
| CDCO157_RS10855 () | 2118931..2119629 | - | 699 | WP_001151105.1 | phage minor tail protein L | - |
| CDCO157_RS10860 () | 2119629..2119958 | - | 330 | WP_000847298.1 | phage tail protein | - |
| CDCO157_RS10865 () | 2119955..2122567 | - | 2613 | WP_000081803.1 | phage tail tape measure protein | - |
| CDCO157_RS10870 () | 2122548..2122961 | - | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| CDCO157_RS10875 () | 2122988..2123410 | - | 423 | WP_000479046.1 | phage minor tail protein G | - |
| CDCO157_RS10880 () | 2123424..2124176 | - | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| CDCO157_RS10885 () | 2124184..2124579 | - | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| CDCO157_RS10890 () | 2124576..2125109 | - | 534 | WP_000975020.1 | phage tail protein | - |
| CDCO157_RS10895 () | 2125124..2125477 | - | 354 | WP_000753016.1 | head-tail joining protein | - |
| CDCO157_RS10900 () | 2125489..2125887 | - | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| CDCO157_RS10905 () | 2125929..2126954 | - | 1026 | WP_000063265.1 | major capsid protein | - |
| CDCO157_RS10910 () | 2127010..2127342 | - | 333 | WP_001295978.1 | head decoration protein | - |
| CDCO157_RS10915 () | 2127352..2128671 | - | 1320 | WP_000123254.1 | S49 family peptidase | - |
| CDCO157_RS10920 () | 2128652..2130253 | - | 1602 | WP_001301524.1 | phage portal protein | - |
| CDCO157_RS10925 () | 2130250..2130456 | - | 207 | WP_000198153.1 | gpW family protein | - |
| CDCO157_RS10930 () | 2130453..2132378 | - | 1926 | WP_001027223.1 | phage terminase large subunit family protein | - |
| CDCO157_RS10935 () | 2132353..2132898 | - | 546 | WP_000867493.1 | terminase small subunit | - |
| CDCO157_RS10940 () | 2133285..2133509 | + | 225 | WP_001444498.1 | YlcI/YnfO family protein | - |
| CDCO157_RS10945 () | 2133591..2133905 | - | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| CDCO157_RS32185 () | 2134431..2134616 | - | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| CDCO157_RS32190 () | 2134839..2134985 | - | 147 | WP_000539795.1 | hypothetical protein | - |
| CDCO157_RS10960 () | 2134985..2135554 | - | 570 | WP_001056813.1 | hypothetical protein | - |
| CDCO157_RS10965 () | 2135825..2136358 | - | 534 | WP_000992148.1 | lysozyme | - |
| CDCO157_RS10970 () | 2136409..2136753 | - | 345 | WP_000731259.1 | YdfR family protein | - |
| CDCO157_RS10975 () | 2136758..2136973 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| CDCO157_RS10985 () | 2137412..2139263 | - | 1852 | Protein_2075 | DUF1737 domain-containing protein | - |
| CDCO157_RS10990 () | 2139489..2139744 | - | 256 | Protein_2076 | DUF3927 family protein | - |
| CDCO157_RS10995 () | 2139741..2140172 | - | 432 | WP_001302123.1 | tellurite resistance protein | - |
| CDCO157_RS11010 () | 2140623..2141336 | - | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| CDCO157_RS32195 () | 2141472..2141669 | - | 198 | WP_000917763.1 | hypothetical protein | - |
| CDCO157_RS11020 () | 2141894..2142448 | - | 555 | WP_000640035.1 | DUF1133 family protein | - |
| CDCO157_RS11025 () | 2142511..2142816 | - | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CDCO157_RS11030 () | 2142829..2143878 | - | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| CDCO157_RS11035 () | 2143880..2144152 | - | 273 | WP_000191872.1 | hypothetical protein | - |
| CDCO157_RS11040 () | 2144274..2144618 | - | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| CDCO157_RS11045 () | 2144738..2144893 | - | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| CDCO157_RS11050 () | 2145184..2145741 | - | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| CDCO157_RS11055 () | 2145743..2145961 | - | 219 | WP_000683609.1 | DUF4014 family protein | - |
| CDCO157_RS11060 () | 2146089..2146400 | - | 312 | WP_001289673.1 | hypothetical protein | - |
| CDCO157_RS11065 () | 2146393..2146620 | - | 228 | WP_000699809.1 | hypothetical protein | - |
| CDCO157_RS11070 () | 2146617..2146898 | - | 282 | WP_000603384.1 | DNA-binding protein | - |
| CDCO157_RS11075 () | 2146931..2147647 | - | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| CDCO157_RS32200 () | 2147681..2148142 | - | 462 | WP_000139447.1 | replication protein | - |
| CDCO157_RS32205 () | 2148135..2149178 | - | 1044 | WP_001262402.1 | hypothetical protein | - |
| CDCO157_RS11090 () | 2149247..2149672 | - | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| CDCO157_RS11095 () | 2149656..2149898 | - | 243 | WP_000747948.1 | hypothetical protein | - |
| CDCO157_RS32210 () | 2150290..2150628 | + | 339 | WP_001416688.1 | peptidase S24 | - |
| CDCO157_RS11105 () | 2150921..2151073 | + | 153 | WP_000380316.1 | DUF1391 family protein | - |
| CDCO157_RS11110 () | 2151085..2151723 | + | 639 | WP_000394548.1 | hypothetical protein | - |
| CDCO157_RS11115 () | 2151724..2151933 | - | 210 | WP_001133037.1 | hypothetical protein | - |
| CDCO157_RS11125 () | 2152498..2152686 | + | 189 | WP_000449175.1 | cell division inhibitor | - |
| CDCO157_RS11130 () | 2152683..2152871 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| CDCO157_RS11135 () | 2152964..2154202 | + | 1239 | Protein_2102 | exonuclease | - |
| CDCO157_RS11140 () | 2154190..2154741 | + | 552 | Protein_2103 | Putative defective protein IntQ ; Integrase | Integrase |
| CDCO157_RS31215 () | 2154847..2155101 | + | 255 | WP_010917821.1 | DinI-like family protein | - |
| CDCO157_RS32215 () | 2156373..2156474 | + | 102 | Protein_2106 | DinI-like family protein | - |
| CDCO157_RS11160 () | 2156524..2157342 | - | 819 | Protein_2107 | IS256 family transposase IS1414 | Transposase |
| CDCO157_RS11165 () | 2157437..2157817 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| CDCO157_RS11170 () | 2157814..2158161 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CDCO157_RS11175 () | 2158211..2159749 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| CDCO157_RS11180 () | 2159787..2160182 | - | 396 | Protein_2111 | IS256 family transposase ISEic2 | Transposase |
| CDCO157_RS32220 () | 2160332..2160982 | - | 651 | WP_001121225.1 | hypothetical protein | VF |
| CDCO157_RS11195 () | 2161693..2162268 | - | 576 | Protein_2113 | hypothetical protein | VF |
| CDCO157_RS11200 () | 2162382..2162651 | - | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| CDCO157_RS11205 () | 2162653..2163876 | - | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CDCO157_RS11210 () | 2163941..2164540 | - | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| CDCO157_RS32945 () | 2164608..2165263 | - | 656 | Protein_2117 | host specificity protein J | - |
| CDCO157_RS32950 () | 2165291..2166787 | - | 1497 | Protein_2118 | host specificity protein J | - |
| CDCO157_RS31235 () | 2166878..2168082 | - | 1205 | Protein_2119 | host specificity protein J | - |
| CDCO157_RS11225 () | 2168424..2169056 | - | 633 | WP_050439450.1 | tail assembly protein | - |
| CDCO157_RS11230 () | 2169002..2169745 | - | 744 | WP_000194720.1 | C40 family peptidase | - |
| CDCO157_RS11235 () | 2169756..2170454 | - | 699 | WP_001179481.1 | phage minor tail protein L | - |
| CDCO157_RS11240 () | 2170454..2170795 | - | 342 | WP_000807954.1 | phage tail protein | - |
| CDCO157_RS11245 () | 2170788..2174030 | - | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| CDCO157_RS11250 () | 2174078..2174287 | - | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| CDCO157_RS11255 () | 2174383..2174757 | - | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| CDCO157_RS11260 () | 2174772..2175488 | - | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| CDCO157_RS11265 () | 2175554..2175898 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| CDCO157_RS11270 () | 2175895..2176341 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| CDCO157_RS11275 () | 2176338..2176688 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| CDCO157_RS11280 () | 2176698..2177024 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| CDCO157_RS11285 () | 2177027..2179606 | - | 2580 | WP_014714119.1 | phage portal protein | - |
| CDCO157_RS11290 () | 2179552..2179773 | - | 222 | WP_001063094.1 | hypothetical protein | - |
| CDCO157_RS11295 () | 2179818..2181755 | - | 1938 | WP_000173030.1 | phage major capsid protein | - |
| CDCO157_RS11300 () | 2181819..2183480 | - | 1662 | WP_001301491.1 | terminase large subunit | - |
| CDCO157_RS11305 () | 2183477..2184040 | - | 564 | WP_000958416.1 | terminase small subunit | - |
| CDCO157_RS29505 () | 2184330..2184695 | - | 366 | WP_000279786.1 | HNH endonuclease | - |
| CDCO157_RS11315 () | 2184737..2184964 | + | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| CDCO157_RS32225 () | 2185389..2185574 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| CDCO157_RS32235 () | 2185802..2185948 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| CDCO157_RS11330 () | 2185948..2186517 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| CDCO157_RS11335 () | 2186788..2187321 | - | 534 | WP_000992137.1 | lysozyme | - |
| CDCO157_RS11340 () | 2187372..2187716 | - | 345 | WP_000731259.1 | YdfR family protein | - |
| CDCO157_RS11345 () | 2187721..2187936 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| CDCO157_RS11355 () | 2188376..2190226 | - | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| CDCO157_RS11360 () | 2190453..2190708 | - | 256 | Protein_2146 | DUF3927 family protein | - |
| CDCO157_RS11365 () | 2190705..2191133 | - | 429 | WP_001303509.1 | tellurite resistance protein | - |
| CDCO157_RS11385 () | 2191773..2192462 | - | 690 | WP_001059381.1 | antiterminator | - |
| CDCO157_RS11390 () | 2192459..2192818 | - | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CDCO157_RS11395 () | 2192831..2193880 | - | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| CDCO157_RS31255 () | 2193882..2194160 | - | 279 | WP_012779366.1 | hypothetical protein | - |
| CDCO157_RS11405 () | 2194328..2194483 | - | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| CDCO157_RS31260 () | 2194729..2194833 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| CDCO157_RS11410 () | 2194949..2195533 | - | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| CDCO157_RS11415 () | 2195590..2195985 | - | 396 | WP_001118159.1 | DUF977 family protein | - |
| CDCO157_RS11420 () | 2196001..2196770 | - | 770 | Protein_2156 | DUF1627 domain-containing protein | - |
| CDCO157_RS11430 () | 2196796..2197536 | - | 741 | WP_000788938.1 | ATP-binding protein | - |
| CDCO157_RS11435 () | 2197543..2198505 | - | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| CDCO157_RS11440 () | 2198528..2198953 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| CDCO157_RS11445 () | 2198950..2199252 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| CDCO157_RS31265 () | 2199350..2199721 | + | 372 | WP_001169686.1 | hypothetical protein | - |
| CDCO157_RS11455 () | 2199742..2199933 | + | 192 | WP_001302048.1 | hypothetical protein | - |
| CDCO157_RS11460 () | 2199935..2200213 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CDCO157_RS11470 () | 2200566..2200865 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| CDCO157_RS11475 () | 2200937..2201155 | + | 219 | WP_001171930.1 | hypothetical protein | - |
| CDCO157_RS29545 () | 2201724..2201912 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| CDCO157_RS11480 () | 2201909..2202100 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| CDCO157_RS11485 () | 2202193..2204664 | + | 2472 | WP_000048458.1 | exonuclease | - |
| CDCO157_RS11490 () | 2204737..2204988 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| CDCO157_RS32240 () | 2205023..2205207 | + | 185 | Protein_2170 | DUF3596 domain-containing protein | - |
| CDCO157_RS11500 () | 2205977..2206303 | - | 327 | WP_001302046.1 | YnfA family protein | - |
| CDCO157_RS11505 () | 2206438..2206779 | + | 342 | WP_000705189.1 | DUF1283 family protein | - |
| CDCO157_RS11510 () | 2206814..2207374 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| CDCO157_RS11515 () | 2207377..2208087 | - | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| CDCO157_RS11520 () | 2208195..2208500 | + | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| CDCO157_RS11525 () | 2208699..2211125 | + | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA1008 | NC_002695 | 2157035..2254487 | 0.001 |